RNA–Protein interactions for RNA: ENST00000580248.5

TMCO1-207, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 2 BASIC

Gene TMCO1, Length 1,735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-207ENST00000580248 HNRNPA0Q13151 305 aaKnown RBP16.04■□□□□ 0.16
TMCO1-207ENST00000580248 SKP2Q13309 424 aa16.04■□□□□ 0.16
TMCO1-207ENST00000580248 STPG1Q5TH74 334 aa16.04■□□□□ 0.16
TMCO1-207ENST00000580248 TMPRSS9Q7Z410 1059 aa16.04■□□□□ 0.16
TMCO1-207ENST00000580248 POC5Q8NA72 575 aa16.04■□□□□ 0.16
TMCO1-207ENST00000580248 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.04■□□□□ 0.16
TMCO1-207ENST00000580248 TSLPQ969D9 159 aa16.04■□□□□ 0.16
TMCO1-207ENST00000580248 TM9SF2Q99805 663 aa16.04■□□□□ 0.16
TMCO1-207ENST00000580248 OR8D2Q9GZM6 311 aa16.04■□□□□ 0.16
TMCO1-207ENST00000580248 OR51V1Q9H2C8 321 aa16.04■□□□□ 0.16
TMCO1-207ENST00000580248 KCNN2Q9H2S1 579 aa16.04■□□□□ 0.16
TMCO1-207ENST00000580248 DHCR7Q9UBM7 475 aaKnown RBP16.04■□□□□ 0.16
TMCO1-207ENST00000580248 ZNF229Q9UJW7 825 aa16.04■□□□□ 0.16
TMCO1-207ENST00000580248 SRPK3Q9UPE1 567 aa16.04■□□□□ 0.16
TMCO1-207ENST00000580248 YARS2Q9Y2Z4 477 aaKnown RBP16.04■□□□□ 0.16
TMCO1-207ENST00000580248 PCDHGB7Q9Y5F8 929 aa16.04■□□□□ 0.16
TMCO1-207ENST00000580248 NOX1Q9Y5S8 564 aa16.04■□□□□ 0.16
TMCO1-207ENST00000580248 C2orf92A0A1B0GVN3 265 aa16.03■□□□□ 0.16
TMCO1-207ENST00000580248 ELOA3DA6NLF2 546 aaPredicted RBP16.03■□□□□ 0.16
TMCO1-207ENST00000580248 GTPBP1O00178 669 aaKnown RBP16.03■□□□□ 0.16
TMCO1-207ENST00000580248 GABRPO00591 440 aa16.03■□□□□ 0.16
TMCO1-207ENST00000580248 NTN3O00634 580 aaPredicted RBP16.03■□□□□ 0.16
TMCO1-207ENST00000580248 RNF13O43567 381 aa16.03■□□□□ 0.16
TMCO1-207ENST00000580248 MXD1Q05195 221 aa16.03■□□□□ 0.16
TMCO1-207ENST00000580248 DNASE1L3Q13609 305 aa16.03■□□□□ 0.16
TMCO1-207ENST00000580248 NDUFAF6Q330K2 333 aa16.03■□□□□ 0.16
TMCO1-207ENST00000580248 ELOA3BQ3SY89 546 aa16.03■□□□□ 0.16
TMCO1-207ENST00000580248 SNAP47Q5SQN1 464 aa16.03■□□□□ 0.16
TMCO1-207ENST00000580248 HLA-DQA1Q5Y7H0 255 aa16.03■□□□□ 0.16
TMCO1-207ENST00000580248 TMEM99Q8N816 258 aa16.03■□□□□ 0.16
TMCO1-207ENST00000580248 POMGNT2Q8NAT1 580 aa16.03■□□□□ 0.16
TMCO1-207ENST00000580248 PLPP5Q8NEB5 264 aa16.03■□□□□ 0.16
TMCO1-207ENST00000580248 ELOA3Q8NG57 546 aa16.03■□□□□ 0.16
TMCO1-207ENST00000580248 OR5M3Q8NGP4 307 aa16.03■□□□□ 0.16
TMCO1-207ENST00000580248 SETD6Q8TBK2 473 aa16.03■□□□□ 0.16
TMCO1-207ENST00000580248 PHOSPHO1Q8TCT1 267 aa16.03■□□□□ 0.16
TMCO1-207ENST00000580248 ASB15Q8WXK1 588 aa16.03■□□□□ 0.16
TMCO1-207ENST00000580248 ZNF501Q96CX3 271 aaPredicted RBP16.03■□□□□ 0.16
TMCO1-207ENST00000580248 GFM1Q96RP9 751 aaKnown RBP16.03■□□□□ 0.16
TMCO1-207ENST00000580248 GPX7Q96SL4 187 aaPredicted RBP16.03■□□□□ 0.16
TMCO1-207ENST00000580248 PHOX2BQ99453 314 aa16.03■□□□□ 0.16
TMCO1-207ENST00000580248 KATNB1Q9BVA0 655 aa16.03■□□□□ 0.16
TMCO1-207ENST00000580248 LAT2Q9GZY6 243 aa16.03■□□□□ 0.16
TMCO1-207ENST00000580248 TPK1Q9H3S4 243 aa16.03■□□□□ 0.16
TMCO1-207ENST00000580248 ADGRL4Q9HBW9 690 aa16.03■□□□□ 0.16
TMCO1-207ENST00000580248 SLC6A5Q9Y345 797 aa16.03■□□□□ 0.16
TMCO1-207ENST00000580248 A0A1W2PQD3 144 aa16.02■□□□□ 0.16
TMCO1-207ENST00000580248 A8MUA0 341 aa16.02■□□□□ 0.16
TMCO1-207ENST00000580248 RGS9O75916 674 aaPredicted RBP16.02■□□□□ 0.16
TMCO1-207ENST00000580248 F8A1P23610 371 aa16.02■□□□□ 0.16
TMCO1-207ENST00000580248 GTF2E2P29084 291 aaKnown RBP16.02■□□□□ 0.16
TMCO1-207ENST00000580248 SLC16A1P53985 500 aa16.02■□□□□ 0.16
TMCO1-207ENST00000580248 SLC35D3Q5M8T2 416 aa16.02■□□□□ 0.16
TMCO1-207ENST00000580248 DDI2Q5TDH0 399 aa16.02■□□□□ 0.16
TMCO1-207ENST00000580248 ARHGAP40Q5TG30 622 aa16.02■□□□□ 0.16
TMCO1-207ENST00000580248 ASCL5Q7RTU5 278 aa16.02■□□□□ 0.16
TMCO1-207ENST00000580248 ATG4DQ86TL0 474 aaPredicted RBP16.02■□□□□ 0.16
TMCO1-207ENST00000580248 MARCH9Q86YJ5 346 aa16.02■□□□□ 0.16
TMCO1-207ENST00000580248 ZFP41Q8N8Y5 198 aa16.02■□□□□ 0.16
TMCO1-207ENST00000580248 FAM83FQ8NEG4 500 aaPredicted RBP16.02■□□□□ 0.16
TMCO1-207ENST00000580248 OR10H4Q8NGA5 316 aa16.02■□□□□ 0.16
TMCO1-207ENST00000580248 OR52E2Q8NGJ4 325 aa16.02■□□□□ 0.16
TMCO1-207ENST00000580248 CLIP3Q96DZ5 547 aa16.02■□□□□ 0.16
TMCO1-207ENST00000580248 ARSGQ96EG1 525 aa16.02■□□□□ 0.16
TMCO1-207ENST00000580248 NDEL1Q9GZM8 345 aa16.02■□□□□ 0.16
TMCO1-207ENST00000580248 FGF21Q9NSA1 209 aa16.02■□□□□ 0.16
TMCO1-207ENST00000580248 COPS7AQ9UBW8 275 aa16.02■□□□□ 0.16
TMCO1-207ENST00000580248 ASCC3Q8N3C0 2202 aaKnown RBP16.02■□□□□ 0.16
TMCO1-207ENST00000580248 A8MU76 341 aa16.02■□□□□ 0.15
TMCO1-207ENST00000580248 CASKO14936 926 aa16.02■□□□□ 0.15
TMCO1-207ENST00000580248 REM1O75628 298 aa16.02■□□□□ 0.15
TMCO1-207ENST00000580248 APOA1P02647 267 aa16.02■□□□□ 0.15
TMCO1-207ENST00000580248 ANKRD34CP0C6C1 535 aa16.02■□□□□ 0.15
TMCO1-207ENST00000580248 RPS4XP62701 263 aaKnown RBP16.02■□□□□ 0.15
TMCO1-207ENST00000580248 NHLH1Q02575 133 aa16.02■□□□□ 0.15
TMCO1-207ENST00000580248 GGTLC2Q14390 218 aa16.02■□□□□ 0.15
TMCO1-207ENST00000580248 NSDHLQ15738 373 aa16.02■□□□□ 0.15
TMCO1-207ENST00000580248 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.02■□□□□ 0.152e-8■■■■■ 31.8
TMCO1-207ENST00000580248 PIP4P1Q86T03 277 aa16.02■□□□□ 0.15
TMCO1-207ENST00000580248 ZNF321PQ8N8H1 164 aa16.02■□□□□ 0.15
TMCO1-207ENST00000580248 FAM98AQ8NCA5 519 aaKnown RBP16.02■□□□□ 0.15
TMCO1-207ENST00000580248 C17orf47Q8NEP4 570 aa16.02■□□□□ 0.15
TMCO1-207ENST00000580248 SMPDL3BQ92485 455 aa16.02■□□□□ 0.15
TMCO1-207ENST00000580248 KIAA1143Q96AT1 154 aaPredicted RBP16.02■□□□□ 0.15
TMCO1-207ENST00000580248 TMCO6Q96DC7 493 aa16.02■□□□□ 0.15
TMCO1-207ENST00000580248 ITPKCQ96DU7 683 aa16.02■□□□□ 0.15
TMCO1-207ENST00000580248 MRPL48Q96GC5 212 aaKnown RBP16.02■□□□□ 0.15
TMCO1-207ENST00000580248 TIMP4Q99727 224 aa16.02■□□□□ 0.15
TMCO1-207ENST00000580248 TMED9Q9BVK6 235 aa16.02■□□□□ 0.15
TMCO1-207ENST00000580248 NUDT9Q9BW91 350 aa16.02■□□□□ 0.15
TMCO1-207ENST00000580248 ISG20L2Q9H9L3 353 aaKnown RBP16.02■□□□□ 0.15
TMCO1-207ENST00000580248 NRIP3Q9NQ35 241 aa16.02■□□□□ 0.15
TMCO1-207ENST00000580248 IER3IP1Q9Y5U9 82 aa16.02■□□□□ 0.15
TMCO1-207ENST00000580248 UNC13CQ8NB66 2214 aa16.01■□□□□ 0.15
TMCO1-207ENST00000580248 IGHV5-10-1A0A0J9YXX1 117 aa16.01■□□□□ 0.15
TMCO1-207ENST00000580248 PLPP2O43688 288 aa16.01■□□□□ 0.15
TMCO1-207ENST00000580248 EIF4E2O60573 245 aaKnown RBP16.01■□□□□ 0.15
TMCO1-207ENST00000580248 CLEC2LP0C7M8 214 aa16.01■□□□□ 0.15
TMCO1-207ENST00000580248 APEHP13798 732 aaKnown RBP16.01■□□□□ 0.15
TMCO1-207ENST00000580248 IL12BP29460 328 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms