RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 TRAM2Q15035 370 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 ZNF239Q16600 458 aaKnown RBP12.53□□□□□ -0.4
RPAIN-217ENST00000575711 PLXDC2Q6UX71 529 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 LINC00114Q6XXX2 140 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 WDR88Q6ZMY6 472 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 TSEN54Q7Z6J9 526 aaKnown RBP12.53□□□□□ -0.4
RPAIN-217ENST00000575711 LSRQ86X29 649 aaPredicted RBP12.53□□□□□ -0.4
RPAIN-217ENST00000575711 ZDHHC21Q8IVQ6 265 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 MARVELD2Q8N4S9 558 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 MBD3L2Q8NHZ7 208 aaPredicted RBP12.53□□□□□ -0.4
RPAIN-217ENST00000575711 FNDC9Q8TBE3 224 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 RND1Q92730 232 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 KTI12Q96EK9 354 aaPredicted RBP12.53□□□□□ -0.4
RPAIN-217ENST00000575711 HS6ST2Q96MM7 605 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 RAB3IPQ96QF0 476 aaPredicted RBP12.53□□□□□ -0.4
RPAIN-217ENST00000575711 ZNF347Q96SE7 839 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 PIP5K1AQ99755 562 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 PRSS27Q9BQR3 290 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 RHCGQ9UBD6 479 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 AURKCQ9UQB9 309 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 MED12Q93074 2177 aa12.53□□□□□ -0.4
RPAIN-217ENST00000575711 LIPT2A6NK58 231 aa12.52□□□□□ -0.41
RPAIN-217ENST00000575711 FFAR1O14842 300 aa12.52□□□□□ -0.41
RPAIN-217ENST00000575711 DNPH1O43598 174 aa12.52□□□□□ -0.41
RPAIN-217ENST00000575711 PRSS23O95084 383 aa12.52□□□□□ -0.41
RPAIN-217ENST00000575711 TGM6O95932 706 aa12.52□□□□□ -0.41
RPAIN-217ENST00000575711 H1F0P07305 194 aaKnown RBP12.52□□□□□ -0.41
RPAIN-217ENST00000575711 RAP2AP10114 183 aa12.52□□□□□ -0.41
RPAIN-217ENST00000575711 PTNP21246 168 aa12.52□□□□□ -0.41
RPAIN-217ENST00000575711 FPR1P21462 350 aa12.52□□□□□ -0.41
RPAIN-217ENST00000575711 GTF2E2P29084 291 aaKnown RBP12.52□□□□□ -0.41
RPAIN-217ENST00000575711 OR7A5Q15622 319 aa12.52□□□□□ -0.41
RPAIN-217ENST00000575711 FAM69AQ5T7M9 428 aa12.52□□□□□ -0.41
RPAIN-217ENST00000575711 RIPPLY2Q5TAB7 128 aa12.52□□□□□ -0.41
RPAIN-217ENST00000575711 GTF2IRD2BQ6EKJ0 949 aa12.52□□□□□ -0.41
RPAIN-217ENST00000575711 OR2A2Q6IF42 318 aa12.52□□□□□ -0.41
RPAIN-217ENST00000575711 SEM1Q6ZVN7 128 aa12.52□□□□□ -0.41
RPAIN-217ENST00000575711 NCCRP1Q6ZVX7 275 aaPredicted RBP12.52□□□□□ -0.41
RPAIN-217ENST00000575711 GTF2IRD2Q86UP8 949 aa12.52□□□□□ -0.41
RPAIN-217ENST00000575711 P3H2Q8IVL5 708 aa12.52□□□□□ -0.41
RPAIN-217ENST00000575711 NKAIN4Q8IVV8 208 aa12.52□□□□□ -0.41
RPAIN-217ENST00000575711 ADGRG5Q8IZF4 528 aa12.52□□□□□ -0.41
RPAIN-217ENST00000575711 C9orf106Q8NAJ2 232 aa12.52□□□□□ -0.41
RPAIN-217ENST00000575711 PIK3C3Q8NEB9 887 aa12.52□□□□□ -0.41
RPAIN-217ENST00000575711 MFSD8Q8NHS3 518 aa12.52□□□□□ -0.41
RPAIN-217ENST00000575711 TMEM239Q8WW34 195 aa12.52□□□□□ -0.41
RPAIN-217ENST00000575711 UTP4Q969X6 686 aaKnown RBP12.52□□□□□ -0.41
RPAIN-217ENST00000575711 CCDC120Q96HB5 630 aa12.52□□□□□ -0.41
RPAIN-217ENST00000575711 RSRC1Q96IZ7 334 aaKnown RBP12.52□□□□□ -0.41
RPAIN-217ENST00000575711 ZNF426Q9BUY5 554 aa12.52□□□□□ -0.41
RPAIN-217ENST00000575711 SLC19A3Q9BZV2 496 aa12.52□□□□□ -0.41
RPAIN-217ENST00000575711 ANKRD19PQ9H560 264 aa12.52□□□□□ -0.41
RPAIN-217ENST00000575711 NMNAT1Q9HAN9 279 aaPredicted RBP12.52□□□□□ -0.41
RPAIN-217ENST00000575711 ERRFI1Q9UJM3 462 aaPredicted RBP12.52□□□□□ -0.41
RPAIN-217ENST00000575711 IGHV3-15A0A0B4J1V0 119 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 TCRBV3S1A0A5B6 114 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 KPNA4O00629 521 aaPredicted RBP12.51□□□□□ -0.41
RPAIN-217ENST00000575711 EIF1BO60739 113 aaKnown RBP12.51□□□□□ -0.41
RPAIN-217ENST00000575711 DIRAS1O95057 198 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 AGFG2O95081 481 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 RCBTB2O95199 551 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 MAGEA2P43356 314 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 AGFG1P52594 562 aaKnown RBP12.51□□□□□ -0.41
RPAIN-217ENST00000575711 SMSP52788 366 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 SMIM11AP58511 58 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 SPIBQ01892 262 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 GTF3C1Q12789 2109 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 ESPL1Q14674 2120 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 MFSD13AQ14CX5 517 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 IQCCQ4KMZ1 466 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 FCRLAQ7L513 359 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 PIWIL3Q7Z3Z3 882 aaKnown RBP12.51□□□□□ -0.41
RPAIN-217ENST00000575711 MCEMP1Q8IX19 187 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 SLC43A2Q8N370 569 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 C10orf53Q8N6V4 93 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 OR6S1Q8NH40 331 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 RNF128Q8TEB7 428 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 TMEM255BQ8WV15 326 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 CANT1Q8WVQ1 401 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 ROBO4Q8WZ75 1007 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 SLC25A36Q96CQ1 311 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 ZFP3Q96NJ6 502 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 NAA11Q9BSU3 229 aaPredicted RBP12.51□□□□□ -0.41
RPAIN-217ENST00000575711 PTDSS2Q9BVG9 487 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 KLHL4Q9C0H6 718 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 RNF122Q9H9V4 155 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 MAN2C1Q9NTJ4 1040 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 COQ3Q9NZJ6 369 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 MED31Q9Y3C7 131 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 TESMINQ9Y4I5 508 aa12.51□□□□□ -0.41
RPAIN-217ENST00000575711 POLEQ07864 2286 aa12.5□□□□□ -0.41
RPAIN-217ENST00000575711 A0A1W2PRQ8 180 aa12.5□□□□□ -0.41
RPAIN-217ENST00000575711 HSPB2A8KAH6 182 aa12.5□□□□□ -0.41
RPAIN-217ENST00000575711 SMAD9O15198 467 aaKnown RBP12.5□□□□□ -0.41
RPAIN-217ENST00000575711 AQP8O94778 261 aa12.5□□□□□ -0.41
RPAIN-217ENST00000575711 TOXO94900 526 aa12.5□□□□□ -0.41
RPAIN-217ENST00000575711 GADD45GO95257 159 aa12.5□□□□□ -0.41
RPAIN-217ENST00000575711 PLGP00747 810 aaPredicted RBP12.5□□□□□ -0.41
RPAIN-217ENST00000575711 MT-ND1P03886 318 aa12.5□□□□□ -0.41
RPAIN-217ENST00000575711 TMIGD3P0DMS9 266 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms