RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 VMACQ2NL98 169 aa11.83□□□□□ -0.52
RPAIN-216ENST00000575599 INTS11Q5TA45 600 aaKnown RBP11.83□□□□□ -0.52
RPAIN-216ENST00000575599 GTF2IRD2BQ6EKJ0 949 aa11.83□□□□□ -0.52
RPAIN-216ENST00000575599 GLYATQ6IB77 296 aa11.83□□□□□ -0.52
RPAIN-216ENST00000575599 GTF2IRD2Q86UP8 949 aa11.83□□□□□ -0.52
RPAIN-216ENST00000575599 TMEM200AQ86VY9 491 aa11.83□□□□□ -0.52
RPAIN-216ENST00000575599 DHFR2Q86XF0 187 aa11.83□□□□□ -0.52
RPAIN-216ENST00000575599 CALHM3Q86XJ0 350 aa11.83□□□□□ -0.52
RPAIN-216ENST00000575599 ADGRG3Q86Y34 549 aa11.83□□□□□ -0.52
RPAIN-216ENST00000575599 C10orf67Q8IYJ2 551 aa11.83□□□□□ -0.52
RPAIN-216ENST00000575599 HIPK4Q8NE63 616 aa11.83□□□□□ -0.52
RPAIN-216ENST00000575599 OR6K3Q8NGY3 331 aa11.83□□□□□ -0.52
RPAIN-216ENST00000575599 LINC01560Q8TB33 94 aa11.83□□□□□ -0.52
RPAIN-216ENST00000575599 UTP4Q969X6 686 aaKnown RBP11.83□□□□□ -0.52
RPAIN-216ENST00000575599 FAM162AQ96A26 154 aa11.83□□□□□ -0.52
RPAIN-216ENST00000575599 ARL5BQ96KC2 179 aa11.83□□□□□ -0.52
RPAIN-216ENST00000575599 SPATA5L1Q9BVQ7 753 aa11.83□□□□□ -0.52
RPAIN-216ENST00000575599 C12orf49Q9H741 205 aa11.83□□□□□ -0.52
RPAIN-216ENST00000575599 GLRX2Q9NS18 164 aa11.83□□□□□ -0.52
RPAIN-216ENST00000575599 OSGIN1Q9UJX0 560 aa11.83□□□□□ -0.52
RPAIN-216ENST00000575599 POMPQ9Y244 141 aa11.83□□□□□ -0.52
RPAIN-216ENST00000575599 RRP15Q9Y3B9 282 aaKnown RBP11.83□□□□□ -0.52
RPAIN-216ENST00000575599 SNX13Q9Y5W8 968 aa11.83□□□□□ -0.52
RPAIN-216ENST00000575599 TMEM72A0PK05 275 aa11.82□□□□□ -0.52
RPAIN-216ENST00000575599 CXCR6O00574 342 aa11.82□□□□□ -0.52
RPAIN-216ENST00000575599 CGAP01215 116 aa11.82□□□□□ -0.52
RPAIN-216ENST00000575599 FESP07332 822 aa11.82□□□□□ -0.52
RPAIN-216ENST00000575599 CD8BP10966 210 aa11.82□□□□□ -0.52
RPAIN-216ENST00000575599 POU2F1P14859 743 aa11.82□□□□□ -0.52
RPAIN-216ENST00000575599 PRKAR1BP31321 381 aa11.82□□□□□ -0.52
RPAIN-216ENST00000575599 CSNK2A1P68400 391 aaPredicted RBP11.82□□□□□ -0.52
RPAIN-216ENST00000575599 SORDQ00796 357 aa11.82□□□□□ -0.52
RPAIN-216ENST00000575599 FAM27E3Q08E93 113 aa11.82□□□□□ -0.52
RPAIN-216ENST00000575599 RNPS1Q15287 305 aaKnown RBP11.82□□□□□ -0.52
RPAIN-216ENST00000575599 EXOC3L2Q2M3D2 409 aa11.82□□□□□ -0.52
RPAIN-216ENST00000575599 TMEM201Q5SNT2 666 aa11.82□□□□□ -0.52
RPAIN-216ENST00000575599 WBP2NLQ6ICG8 309 aa11.82□□□□□ -0.52
RPAIN-216ENST00000575599 ZNF474Q6S9Z5 364 aaPredicted RBP11.82□□□□□ -0.52
RPAIN-216ENST00000575599 TMPPEQ6ZT21 453 aa11.82□□□□□ -0.52
RPAIN-216ENST00000575599 PTOV1Q86YD1 416 aa11.82□□□□□ -0.52
RPAIN-216ENST00000575599 ZNF610Q8N9Z0 462 aa11.82□□□□□ -0.52
RPAIN-216ENST00000575599 ZNF607Q96SK3 696 aa11.82□□□□□ -0.52
RPAIN-216ENST00000575599 PCDHAC1Q9H158 963 aa11.82□□□□□ -0.52
RPAIN-216ENST00000575599 MCCC2Q9HCC0 563 aa11.82□□□□□ -0.52
RPAIN-216ENST00000575599 KLHL13Q9P2N7 655 aa11.82□□□□□ -0.52
RPAIN-216ENST00000575599 SMAD9O15198 467 aaKnown RBP11.81□□□□□ -0.52
RPAIN-216ENST00000575599 SERPINB7O75635 380 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 PRKD3O94806 890 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 IFNA14P01570 189 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 NCK1P16333 377 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 CXCR1P25024 350 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 PCGF2P35227 344 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 GZMMP51124 257 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 KRTAP10-9P60411 292 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 DMTNQ08495 405 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 VEZF1Q14119 521 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 GLIPR1L2Q4G1C9 344 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 COMTD1Q86VU5 262 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 ARMC8Q8IUR7 673 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 TUSC5Q8IXB3 177 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 SLC43A2Q8N370 569 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 SLC26A7Q8TE54 656 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 STMN2Q93045 179 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 DDIT4LQ96D03 193 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 ZHX1-C8orf76Q96EF9 292 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 LURAP1Q96LR2 239 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 NSMCE2Q96MF7 247 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 ACTR3BQ9P1U1 418 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 KLHL9Q9P2J3 617 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 GMPR2Q9P2T1 348 aaKnown RBP11.81□□□□□ -0.52
RPAIN-216ENST00000575599 SLC13A4Q9UKG4 626 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 USP22Q9UPT9 525 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 HDGFL3Q9Y3E1 203 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 CENPEQ02224 2701 aa11.81□□□□□ -0.52
RPAIN-216ENST00000575599 ZC3H12DA2A288 527 aaKnown RBP11.8□□□□□ -0.52
RPAIN-216ENST00000575599 ARPC2O15144 300 aa11.8□□□□□ -0.52
RPAIN-216ENST00000575599 ZNF208O43345 1280 aa11.8□□□□□ -0.52
RPAIN-216ENST00000575599 TPST1O60507 370 aa11.8□□□□□ -0.52
RPAIN-216ENST00000575599 PMS2P2O95744 297 aa11.8□□□□□ -0.52
RPAIN-216ENST00000575599 OPN1SWP03999 348 aa11.8□□□□□ -0.52
RPAIN-216ENST00000575599 GGT1P19440 569 aa11.8□□□□□ -0.52
RPAIN-216ENST00000575599 FKBP2P26885 142 aaKnown RBP11.8□□□□□ -0.52
RPAIN-216ENST00000575599 CD79BP40259 229 aa11.8□□□□□ -0.52
RPAIN-216ENST00000575599 OR2B6P58173 313 aa11.8□□□□□ -0.52
RPAIN-216ENST00000575599 MS4A2Q01362 244 aa11.8□□□□□ -0.52
RPAIN-216ENST00000575599 RASGEF1BQ0VAM2 473 aa11.8□□□□□ -0.52
RPAIN-216ENST00000575599 DHRS4L2Q6PKH6 230 aa11.8□□□□□ -0.52
RPAIN-216ENST00000575599 CYP2R1Q6VVX0 501 aa11.8□□□□□ -0.52
RPAIN-216ENST00000575599 NUFIP2Q7Z417 695 aaKnown RBP11.8□□□□□ -0.52
RPAIN-216ENST00000575599 STK32CQ86UX6 486 aa11.8□□□□□ -0.52
RPAIN-216ENST00000575599 SPATA24Q86W54 205 aa11.8□□□□□ -0.52
RPAIN-216ENST00000575599 SMYD1Q8NB12 490 aa11.8□□□□□ -0.52
RPAIN-216ENST00000575599 BHLHE22Q8NFJ8 381 aaPredicted RBP11.8□□□□□ -0.52
RPAIN-216ENST00000575599 FAM222BQ8WU58 562 aa11.8□□□□□ -0.52
RPAIN-216ENST00000575599 RSRC1Q96IZ7 334 aaKnown RBP11.8□□□□□ -0.52
RPAIN-216ENST00000575599 ZNF300Q96RE9 604 aaPredicted RBP11.8□□□□□ -0.52
RPAIN-216ENST00000575599 PSD2Q9BQI7 771 aa11.8□□□□□ -0.52
RPAIN-216ENST00000575599 RSPO3Q9BXY4 272 aaPredicted RBP11.8□□□□□ -0.52
RPAIN-216ENST00000575599 KLHL4Q9C0H6 718 aa11.8□□□□□ -0.52
RPAIN-216ENST00000575599 ADAM19Q9H013 955 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms