RNA–Protein interactions for RNA: ENST00000574085.5

TRPV1-208, Transcript of transient receptor potential cation channel subfamily V member 1, human

TSL 2

Gene TRPV1, Length 2,644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRPV1-208	ENST00000574085	HCCS	P53701	268 aa		11.74	□□□□□ -0.53
TRPV1-208	ENST00000574085	PRMT2	P55345	433 aa		11.74	□□□□□ -0.53
TRPV1-208	ENST00000574085	TGM3	Q08188	693 aa		11.74	□□□□□ -0.53
TRPV1-208	ENST00000574085	KRT33B	Q14525	404 aa		11.74	□□□□□ -0.53
TRPV1-208	ENST00000574085	AGER	Q15109	404 aa		11.74	□□□□□ -0.53
TRPV1-208	ENST00000574085	RPE65	Q16518	533 aa		11.74	□□□□□ -0.53
TRPV1-208	ENST00000574085	CSRP2	Q16527	193 aa		11.74	□□□□□ -0.53
TRPV1-208	ENST00000574085	TMEM69	Q5SWH9	247 aa		11.74	□□□□□ -0.53
TRPV1-208	ENST00000574085	LCTL	Q6UWM7	567 aa		11.74	□□□□□ -0.53
TRPV1-208	ENST00000574085	USP53	Q70EK8	1073 aa		11.74	□□□□□ -0.53
TRPV1-208	ENST00000574085	DMRTC2	Q8IXT2	367 aa	Predicted RBP	11.74	□□□□□ -0.53
TRPV1-208	ENST00000574085	CMTM8	Q8IZV2	173 aa		11.74	□□□□□ -0.53
TRPV1-208	ENST00000574085	OR2AK2	Q8NG84	335 aa		11.74	□□□□□ -0.53
TRPV1-208	ENST00000574085	C1orf216	Q8TAB5	229 aa		11.74	□□□□□ -0.53
TRPV1-208	ENST00000574085	CMTM3	Q96MX0	182 aa		11.74	□□□□□ -0.53
TRPV1-208	ENST00000574085	OR7D2	Q96RA2	312 aa		11.74	□□□□□ -0.53
TRPV1-208	ENST00000574085	PBX4	Q9BYU1	374 aa		11.74	□□□□□ -0.53
TRPV1-208	ENST00000574085	RHBG	Q9H310	441 aa		11.74	□□□□□ -0.53
TRPV1-208	ENST00000574085	NRIP3	Q9NQ35	241 aa		11.74	□□□□□ -0.53
TRPV1-208	ENST00000574085	LSM7	Q9UK45	103 aa	Known RBP	11.74	□□□□□ -0.53
TRPV1-208	ENST00000574085	FBXL4	Q9UKA2	621 aa		11.74	□□□□□ -0.53
TRPV1-208	ENST00000574085	CASP8AP2	Q9UKL3	1982 aa		11.74	□□□□□ -0.53
TRPV1-208	ENST00000574085	MTCL1	Q9Y4B5	1905 aa	Known RBP	11.74	□□□□□ -0.53
TRPV1-208	ENST00000574085	FAM86C2P	A6NEL3	165 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	SCAMP1	O15126	338 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	RLN1	P04808	185 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	BMP7	P18075	431 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	TEAD1	P28347	426 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	MECP2	P51608	486 aa	Known RBP	11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	ACY1	Q03154	408 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	POM121L1P	Q3SYA9	428 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	ZNF658B	Q4V348	819 aa	Predicted RBP	11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	HAGHL	Q6PII5	290 aa	Predicted RBP	11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	C17orf64	Q86WR6	236 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	EID2	Q8N6I1	236 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	ZNF433	Q8N7K0	673 aa	Predicted RBP	11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	BOLL	Q8N9W6	283 aa	Known RBP	11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	CYB561A3	Q8NBI2	242 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	MYLIP	Q8WY64	445 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	CASD1	Q96PB1	797 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	KRCC1	Q9NPI7	259 aa	Predicted RBP	11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	PRMT8	Q9NR22	394 aa	Predicted RBP	11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	SLC25A13	Q9UJS0	675 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085		A0A1B0GV90	55 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	GPR31	O00270	319 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	RASGRP1	O95267	797 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	GALT	P07902	379 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	CKB	P12277	381 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	MAK	P20794	623 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	ADH7	P40394	386 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	KCNJ3	P48549	501 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	PSMD4	P55036	377 aa	Known RBP	11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	FKBP1B	P68106	108 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	RNF4	P78317	190 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	DUSP2	Q05923	314 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	SERTAD2	Q14140	314 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	C11orf88	Q6PI97	169 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	UBE3D	Q7Z6J8	389 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	CCDC116	Q8IYX3	515 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	C12orf45	Q8N5I9	185 aa	Predicted RBP	11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	PFN4	Q8NHR9	129 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	SMIM19	Q96E16	107 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	SCLY	Q96I15	445 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	HS6ST2	Q96MM7	605 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	CD180	Q99467	661 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	GFI1	Q99684	422 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	AIF1L	Q9BQI0	150 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	CRB3	Q9BUF7	120 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	TRMT61B	Q9BVS5	477 aa	Known RBP	11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	RRAGC	Q9HB90	399 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	BARX1	Q9HBU1	254 aa	Predicted RBP	11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	POT1	Q9NUX5	634 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	SIDT1	Q9NXL6	827 aa	Known RBP	11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	ANKRD10	Q9NXR5	420 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	RASL12	Q9NYN1	266 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	MYEF2	Q9P2K5	600 aa	Known RBP	11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	FOXJ3	Q9UPW0	622 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	DENND4A	Q7Z401	1863 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	ZNF729	A6NN14	1252 aa	Predicted RBP	11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	DISC1	C4P0D8	188 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	KPNA3	O00505	521 aa	Predicted RBP	11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	CKM	P06732	381 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	UBB	P0CG47	229 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	UBC	P0CG48	685 aa	Known RBP	11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	C8orf89	P0DMQ9	161 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	RPA2	P15927	270 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	MAPK3	P27361	379 aa	Predicted RBP	11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	DPP4	P27487	766 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	ZNF157	P51786	506 aa	Predicted RBP	11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	RPS11	P62280	158 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	RPS15	P62841	145 aa	Known RBP	11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	RPS27A	P62979	156 aa	Known RBP	11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	UBA52	P62987	128 aa	Known RBP	11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	FOXK2	Q01167	660 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	CBFB	Q13951	182 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	CDK5R1	Q15078	307 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	STPG1	Q5TH74	334 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	TSSK4	Q6SA08	328 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	C17orf99	Q6UX52	265 aa		11.73	□□□□□ -0.53
TRPV1-208	ENST00000574085	THSD4	Q6ZMP0	1018 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms