RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 HRASLSQ9HDD0 168 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 NOX4Q9NPH5 578 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 PILRAQ9UKJ1 303 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 IER3IP1Q9Y5U9 82 aa17.53■□□□□ 0.4
SCARF1-206ENST00000573852 POM121BA6NF01 834 aa17.52■□□□□ 0.4
SCARF1-206ENST00000573852 MAGEB1P43366 347 aa17.52■□□□□ 0.4
SCARF1-206ENST00000573852 ENPP2Q13822 863 aa17.52■□□□□ 0.4
SCARF1-206ENST00000573852 ALG10BQ5I7T1 473 aa17.52■□□□□ 0.4
SCARF1-206ENST00000573852 RPL22L1Q6P5R6 122 aaKnown RBP17.52■□□□□ 0.4
SCARF1-206ENST00000573852 FIGLAQ6QHK4 219 aa17.52■□□□□ 0.4
SCARF1-206ENST00000573852 SEZ6L2Q6UXD5 910 aa17.52■□□□□ 0.4
SCARF1-206ENST00000573852 UNQ9370/PRO34162Q6UXP9 181 aa17.52■□□□□ 0.4
SCARF1-206ENST00000573852 SLITRK4Q8IW52 837 aa17.52■□□□□ 0.4
SCARF1-206ENST00000573852 OR1E3Q8WZA6 343 aa17.52■□□□□ 0.4
SCARF1-206ENST00000573852 SLC25A18Q9H1K4 315 aa17.52■□□□□ 0.4
SCARF1-206ENST00000573852 CLEC4MQ9H2X3 399 aaPredicted RBP17.52■□□□□ 0.4
SCARF1-206ENST00000573852 POT1Q9NUX5 634 aa17.52■□□□□ 0.4
SCARF1-206ENST00000573852 WSB2Q9NYS7 404 aaPredicted RBP17.52■□□□□ 0.4
SCARF1-206ENST00000573852 RPS6KB2Q9UBS0 482 aa17.52■□□□□ 0.4
SCARF1-206ENST00000573852 ADAM18Q9Y3Q7 739 aa17.52■□□□□ 0.4
SCARF1-206ENST00000573852 MCIDASD6RGH6 385 aa17.52■□□□□ 0.39
SCARF1-206ENST00000573852 GPR75O95800 540 aa17.52■□□□□ 0.39
SCARF1-206ENST00000573852 POLR2CP19387 275 aaPredicted RBP17.52■□□□□ 0.39
SCARF1-206ENST00000573852 SRMP19623 302 aa17.52■□□□□ 0.39
SCARF1-206ENST00000573852 PRRT3Q5FWE3 981 aa17.52■□□□□ 0.39
SCARF1-206ENST00000573852 ABHD13Q7L211 337 aa17.52■□□□□ 0.39
SCARF1-206ENST00000573852 COMMD7Q86VX2 200 aa17.52■□□□□ 0.39
SCARF1-206ENST00000573852 OR52I2Q8NH67 350 aa17.52■□□□□ 0.39
SCARF1-206ENST00000573852 LRRC20Q8TCA0 184 aa17.52■□□□□ 0.39
SCARF1-206ENST00000573852 PIGKQ92643 395 aa17.52■□□□□ 0.39
SCARF1-206ENST00000573852 NCDNQ9UBB6 729 aa17.52■□□□□ 0.39
SCARF1-206ENST00000573852 FBXL21Q9UKT6 434 aa17.52■□□□□ 0.39
SCARF1-206ENST00000573852 LINC01553A4QN01 128 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 URADA6NGE7 173 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 IDSB3KWA1 339 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 CYR61O00622 381 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 KHNYNO15037 678 aaKnown RBP17.51■□□□□ 0.39
SCARF1-206ENST00000573852 IFNA7P01567 189 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 VEGFBP49765 207 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 VEGFCP49767 419 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 CLLU1Q5K131 121 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 ZCCHC12Q6PEW1 402 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 DGAT2L6Q6ZPD8 337 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 SERPINA12Q8IW75 414 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 OR10G6Q8NH81 332 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 SLC22A18Q96BI1 424 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 SLC25A38Q96DW6 304 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 OR10A4Q9H209 315 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 LYRM4Q9HD34 91 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 ZNF275Q9NSD4 429 aaPredicted RBP17.51■□□□□ 0.39
SCARF1-206ENST00000573852 DNAJB12Q9NXW2 375 aaKnown RBP17.51■□□□□ 0.39
SCARF1-206ENST00000573852 SPEF1Q9Y4P9 236 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 TBC1D3DA0A087WVF3 549 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 TBC1D3IA0A087WXS9 549 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 ACOD1A6NK06 481 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 B8ZZF3 427 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 TBC1D3LB9A6J9 549 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 TNFSF14O43557 240 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 SELENOFO60613 162 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 TBC1D3HP0C7X1 549 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 SEC13P55735 322 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 GGTLC2Q14390 218 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 GRK1Q15835 563 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 STPG1Q5TH74 334 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 TBC1D3CQ6IPX1 549 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 GLRX5Q86SX6 157 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 TBC1D3Q8IZP1 549 aaPredicted RBP17.51■□□□□ 0.39
SCARF1-206ENST00000573852 POMGNT2Q8NAT1 580 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 PLA2G2FQ9BZM2 168 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 PRDM9Q9NQV7 894 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 C2orf42Q9NWW7 574 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 UBQLN2Q9UHD9 624 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 CA5BQ9Y2D0 317 aa17.51■□□□□ 0.39
SCARF1-206ENST00000573852 PLRG1O43660 514 aaKnown RBP17.5■□□□□ 0.39
SCARF1-206ENST00000573852 AK1P00568 194 aa17.5■□□□□ 0.39
SCARF1-206ENST00000573852 BLVRAP53004 296 aa17.5■□□□□ 0.39
SCARF1-206ENST00000573852 GAS6Q14393 721 aa17.5■□□□□ 0.39
SCARF1-206ENST00000573852 KIR2DS3Q14952 304 aa17.5■□□□□ 0.39
SCARF1-206ENST00000573852 ZNF776Q68DI1 518 aaPredicted RBP17.5■□□□□ 0.39
SCARF1-206ENST00000573852 CAMKVQ8NCB2 501 aa17.5■□□□□ 0.39
SCARF1-206ENST00000573852 TEX51A0A1B0GUA7 166 aa17.5■□□□□ 0.39
SCARF1-206ENST00000573852 H0YGG7 62 aa17.5■□□□□ 0.39
SCARF1-206ENST00000573852 TYRP1P17643 537 aa17.5■□□□□ 0.39
SCARF1-206ENST00000573852 PSMB1P20618 241 aaKnown RBP17.5■□□□□ 0.39
SCARF1-206ENST00000573852 LCN1P31025 176 aa17.5■□□□□ 0.39
SCARF1-206ENST00000573852 RBM34P42696 430 aaKnown RBP17.5■□□□□ 0.39
SCARF1-206ENST00000573852 CLDN12P56749 244 aa17.5■□□□□ 0.39
SCARF1-206ENST00000573852 ARF3P61204 181 aaPredicted RBP17.5■□□□□ 0.39
SCARF1-206ENST00000573852 ENPP7Q6UWV6 458 aa17.5■□□□□ 0.39
SCARF1-206ENST00000573852 FTMTQ8N4E7 242 aa17.5■□□□□ 0.39
SCARF1-206ENST00000573852 OR4N2Q8NGD1 307 aa17.5■□□□□ 0.39
SCARF1-206ENST00000573852 OR14A16Q8NHC5 309 aa17.5■□□□□ 0.39
SCARF1-206ENST00000573852 ZPLD1Q8TCW7 415 aa17.5■□□□□ 0.39
SCARF1-206ENST00000573852 MYADMQ96S97 322 aa17.5■□□□□ 0.39
SCARF1-206ENST00000573852 PLEKHA1Q9HB21 404 aa17.5■□□□□ 0.39
SCARF1-206ENST00000573852 TRPV4Q9HBA0 871 aa17.5■□□□□ 0.39
SCARF1-206ENST00000573852 KLK11Q9UBX7 282 aa17.5■□□□□ 0.39
SCARF1-206ENST00000573852 ENTPD2Q9Y5L3 495 aa17.5■□□□□ 0.39
SCARF1-206ENST00000573852 TP53BP1Q12888 1972 aaPredicted RBP17.5■□□□□ 0.39
SCARF1-206ENST00000573852 PSMD9O00233 223 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms