RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 PON3Q15166 354 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 FAM69AQ5T7M9 428 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 CAMKVQ8NCB2 501 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 OR5T3Q8NGG3 340 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 FLVCR1-AS1Q8TAF5 88 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 PIGKQ92643 395 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 RBP7Q96R05 134 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 ZNF426Q9BUY5 554 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 OR10A4Q9H209 315 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 PRDM9Q9NQV7 894 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 NUP50Q9UKX7 468 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 SPACA6W5XKT8 324 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 TBC1D3DA0A087WVF3 549 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 TBC1D3IA0A087WXS9 549 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 TBC1D3LB9A6J9 549 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 KHNYNO15037 678 aaKnown RBP14.38□□□□□ -0.11
NUP88-207ENST00000573584 CFDP00746 253 aaPredicted RBP14.38□□□□□ -0.11
NUP88-207ENST00000573584 TBC1D3HP0C7X1 549 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 MAP3K8P41279 467 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 VEGFCP49767 419 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 RAB14P61106 215 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 TBC1D3CQ6IPX1 549 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 TBC1D3Q8IZP1 549 aaPredicted RBP14.38□□□□□ -0.11
NUP88-207ENST00000573584 FTMTQ8N4E7 242 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 OR52I2Q8NH67 350 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 OR10G6Q8NH81 332 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 PMM1Q92871 262 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 CMTM3Q96MX0 182 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 C1QTNF7Q9BXJ2 289 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 LYRM4Q9HD34 91 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 EMC3Q9P0I2 261 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 AKAP7Q9P0M2 348 aaPredicted RBP14.38□□□□□ -0.11
NUP88-207ENST00000573584 ICAM5Q9UMF0 924 aa14.38□□□□□ -0.11
NUP88-207ENST00000573584 CHD9Q3L8U1 2897 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 POU2F2P09086 479 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 TYRP1P17643 537 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 RBM34P42696 430 aaKnown RBP14.37□□□□□ -0.11
NUP88-207ENST00000573584 ACAA2P42765 397 aaKnown RBP14.37□□□□□ -0.11
NUP88-207ENST00000573584 EMDP50402 254 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 BLVRAP53004 296 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 MGAT2Q10469 447 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 KIR2DS3Q14952 304 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 TMEM255AQ5JRV8 349 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 FCRL6Q6DN72 434 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 FAM199XQ6PEV8 388 aaPredicted RBP14.37□□□□□ -0.11
NUP88-207ENST00000573584 FIGLAQ6QHK4 219 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 Q6ZTK2 550 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 CDH24Q86UP0 819 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 SERPINA12Q8IW75 414 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 ZNF433Q8N7K0 673 aaPredicted RBP14.37□□□□□ -0.11
NUP88-207ENST00000573584 CCL4L1Q8NHW4 92 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 SCARF2Q96GP6 870 aaPredicted RBP14.37□□□□□ -0.11
NUP88-207ENST00000573584 MYADMQ96S97 322 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 TRIM2Q9C040 744 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 SLC25A18Q9H1K4 315 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 NCDNQ9UBB6 729 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 ADAM18Q9Y3Q7 739 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 G3V3Q6 166 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 PIN1P1O15428 100 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 NDUFB2O95178 105 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 TGM6O95932 706 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 POLR2CP19387 275 aaPredicted RBP14.37□□□□□ -0.11
NUP88-207ENST00000573584 RPL6Q02878 288 aaKnown RBP14.37□□□□□ -0.11
NUP88-207ENST00000573584 PRRT3Q5FWE3 981 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 ZNF776Q68DI1 518 aaPredicted RBP14.37□□□□□ -0.11
NUP88-207ENST00000573584 UNQ9370/PRO34162Q6UXP9 181 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 OR14A16Q8NHC5 309 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 ZNRF4Q8WWF5 429 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 CLIP3Q96DZ5 547 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 RBCK1Q9BYM8 510 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 CHIAQ9BZP6 476 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 POT1Q9NUX5 634 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 COPS3Q9UNS2 423 aa14.37□□□□□ -0.11
NUP88-207ENST00000573584 POM121BA6NF01 834 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 ACOD1A6NK06 481 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 IFITM5A6NNB3 132 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 MCIDASD6RGH6 385 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 M0R233 179 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 TNFSF14O43557 240 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 ECDO95905 644 aaPredicted RBP14.36□□□□□ -0.11
NUP88-207ENST00000573584 RPL4P36578 427 aaKnown RBP14.36□□□□□ -0.11
NUP88-207ENST00000573584 GGTLC2Q14390 218 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 ENPP7Q6UWV6 458 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 FCRLAQ7L513 359 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 SLC43A2Q8N370 569 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 MSANTD3Q96H12 275 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 SLC6A17Q9H1V8 727 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 RABL2AQ9UBK7 228 aaPredicted RBP14.36□□□□□ -0.11
NUP88-207ENST00000573584 KLK11Q9UBX7 282 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 PPIEQ9UNP9 301 aaKnown RBP14.36□□□□□ -0.11
NUP88-207ENST00000573584 RABL2BQ9UNT1 228 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 MAB21L2Q9Y586 359 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 CYR61O00622 381 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 ZNF749O43361 778 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 SELENOFO60613 162 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 PRAF2O60831 178 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 APODP05090 189 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 CD1AP06126 327 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 DIO1P49895 249 aa14.36□□□□□ -0.11
NUP88-207ENST00000573584 SEC13P55735 322 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms