RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 DNM1P46Q6ZS02 220 aa16.63■□□□□ 0.25
SPSB3-210ENST00000568416 OR52P1PQ8NH57 321 aa16.63■□□□□ 0.25
SPSB3-210ENST00000568416 OR52B2Q96RD2 323 aa16.63■□□□□ 0.25
SPSB3-210ENST00000568416 AMBRA1Q9C0C7 1298 aa16.63■□□□□ 0.25
SPSB3-210ENST00000568416 SLCO5A1Q9H2Y9 848 aa16.63■□□□□ 0.25
SPSB3-210ENST00000568416 RMND5AQ9H871 391 aa16.63■□□□□ 0.25
SPSB3-210ENST00000568416 TMBIM4Q9HC24 238 aa16.63■□□□□ 0.25
SPSB3-210ENST00000568416 FAIMQ9NVQ4 179 aa16.63■□□□□ 0.25
SPSB3-210ENST00000568416 PARPBPQ9NWS1 579 aa16.63■□□□□ 0.25
SPSB3-210ENST00000568416 A0A1W2PR80 420 aa16.62■□□□□ 0.25
SPSB3-210ENST00000568416 RNF223E7ERA6 249 aa16.62■□□□□ 0.25
SPSB3-210ENST00000568416 KLF11O14901 512 aa16.62■□□□□ 0.25
SPSB3-210ENST00000568416 UBDO15205 165 aa16.62■□□□□ 0.25
SPSB3-210ENST00000568416 NDUFS7O75251 213 aa16.62■□□□□ 0.25
SPSB3-210ENST00000568416 ANP32DO95626 131 aa16.62■□□□□ 0.25
SPSB3-210ENST00000568416 BCHEP06276 602 aa16.62■□□□□ 0.25
SPSB3-210ENST00000568416 GKN3PP0CG01 181 aa16.62■□□□□ 0.25
SPSB3-210ENST00000568416 PTAFRP25105 342 aa16.62■□□□□ 0.25
SPSB3-210ENST00000568416 ACVR1BP36896 505 aa16.62■□□□□ 0.25
SPSB3-210ENST00000568416 CRATP43155 626 aa16.62■□□□□ 0.25
SPSB3-210ENST00000568416 ZNF83P51522 516 aa16.62■□□□□ 0.25
SPSB3-210ENST00000568416 RNF220Q5VTB9 566 aa16.62■□□□□ 0.25
SPSB3-210ENST00000568416 PRIMA1Q86XR5 153 aa16.62■□□□□ 0.25
SPSB3-210ENST00000568416 OR9I1Q8NGQ6 314 aa16.62■□□□□ 0.25
SPSB3-210ENST00000568416 SLC38A5Q8WUX1 472 aa16.62■□□□□ 0.25
SPSB3-210ENST00000568416 TMEM45BQ96B21 275 aa16.62■□□□□ 0.25
SPSB3-210ENST00000568416 AURKBQ96GD4 344 aaPredicted RBP16.62■□□□□ 0.25
SPSB3-210ENST00000568416 ITCHQ96J02 903 aa16.62■□□□□ 0.25
SPSB3-210ENST00000568416 ALG2Q9H553 416 aa16.62■□□□□ 0.25
SPSB3-210ENST00000568416 SLC7A10Q9NS82 523 aa16.62■□□□□ 0.25
SPSB3-210ENST00000568416 DCTN4Q9UJW0 460 aa16.62■□□□□ 0.25
SPSB3-210ENST00000568416 MGAT4BQ9UQ53 548 aa16.62■□□□□ 0.25
SPSB3-210ENST00000568416 ZNF443Q9Y2A4 671 aaPredicted RBP16.62■□□□□ 0.25
SPSB3-210ENST00000568416 CHST2Q9Y4C5 530 aa16.62■□□□□ 0.25
SPSB3-210ENST00000568416 NIPBLQ6KC79 2804 aaeCLIP16.62■□□□□ 0.25
SPSB3-210ENST00000568416 FREM1Q5H8C1 2179 aa16.61■□□□□ 0.25
SPSB3-210ENST00000568416 LIPT2A6NK58 231 aa16.61■□□□□ 0.25
SPSB3-210ENST00000568416 E7EQL1 145 aa16.61■□□□□ 0.25
SPSB3-210ENST00000568416 CXCR1P25024 350 aa16.61■□□□□ 0.25
SPSB3-210ENST00000568416 CD40P25942 277 aa16.61■□□□□ 0.25
SPSB3-210ENST00000568416 POLR2JP52435 117 aaKnown RBP16.61■□□□□ 0.25
SPSB3-210ENST00000568416 SPOCK1Q08629 439 aa16.61■□□□□ 0.25
SPSB3-210ENST00000568416 CEACAM7Q14002 265 aa16.61■□□□□ 0.25
SPSB3-210ENST00000568416 RPS26P11Q5JNZ5 115 aaPredicted RBP16.61■□□□□ 0.25
SPSB3-210ENST00000568416 OTUD3Q5T2D3 398 aaPredicted RBP16.61■□□□□ 0.25
SPSB3-210ENST00000568416 TSPO2Q5TGU0 170 aa16.61■□□□□ 0.25
SPSB3-210ENST00000568416 KLHL17Q6TDP4 642 aa16.61■□□□□ 0.25
SPSB3-210ENST00000568416 PIAS4Q8N2W9 510 aaPredicted RBP16.61■□□□□ 0.25
SPSB3-210ENST00000568416 TMEM99Q8N816 258 aa16.61■□□□□ 0.25
SPSB3-210ENST00000568416 WDR31Q8NA23 367 aa16.61■□□□□ 0.25
SPSB3-210ENST00000568416 C1orf162Q8NEQ5 155 aaPredicted RBP16.61■□□□□ 0.25
SPSB3-210ENST00000568416 VPS33AQ96AX1 596 aa16.61■□□□□ 0.25
SPSB3-210ENST00000568416 TMEM19Q96HH6 336 aa16.61■□□□□ 0.25
SPSB3-210ENST00000568416 SF3B5Q9BWJ5 86 aaKnown RBP16.61■□□□□ 0.25
SPSB3-210ENST00000568416 REG4Q9BYZ8 158 aa16.61■□□□□ 0.25
SPSB3-210ENST00000568416 THUMPD1Q9NXG2 353 aaKnown RBP16.61■□□□□ 0.25
SPSB3-210ENST00000568416 UPB1Q9UBR1 384 aa16.61■□□□□ 0.25
SPSB3-210ENST00000568416 GDF2Q9UK05 429 aaPredicted RBP16.61■□□□□ 0.25
SPSB3-210ENST00000568416 A0A0G2JPF8 293 aa16.6■□□□□ 0.25
SPSB3-210ENST00000568416 AQP7P3A6NL99 342 aa16.6■□□□□ 0.25
SPSB3-210ENST00000568416 HNRNPCL2B2RXH8 293 aa16.6■□□□□ 0.25
SPSB3-210ENST00000568416 HNRNPCL3B7ZW38 293 aa16.6■□□□□ 0.25
SPSB3-210ENST00000568416 HNRNPCL1O60812 293 aaKnown RBP16.6■□□□□ 0.25
SPSB3-210ENST00000568416 AKR7A3O95154 331 aa16.6■□□□□ 0.25
SPSB3-210ENST00000568416 GPIP06744 558 aa16.6■□□□□ 0.25
SPSB3-210ENST00000568416 HNRNPCL4P0DMR1 293 aa16.6■□□□□ 0.25
SPSB3-210ENST00000568416 PRG2P13727 222 aa16.6■□□□□ 0.25
SPSB3-210ENST00000568416 PPP2R2BQ00005 443 aa16.6■□□□□ 0.25
SPSB3-210ENST00000568416 OR7A5Q15622 319 aa16.6■□□□□ 0.25
SPSB3-210ENST00000568416 ZSWIM7Q19AV6 140 aa16.6■□□□□ 0.25
SPSB3-210ENST00000568416 AGAP6Q5VW22 663 aa16.6■□□□□ 0.25
SPSB3-210ENST00000568416 WBP2NLQ6ICG8 309 aa16.6■□□□□ 0.25
SPSB3-210ENST00000568416 C11orf71Q6IPW1 123 aa16.6■□□□□ 0.25
SPSB3-210ENST00000568416 CLIP4Q8N3C7 705 aa16.6■□□□□ 0.25
SPSB3-210ENST00000568416 CADM2Q8N3J6 435 aa16.6■□□□□ 0.25
SPSB3-210ENST00000568416 C17orf78Q8N4C9 275 aa16.6■□□□□ 0.25
SPSB3-210ENST00000568416 ZIC4Q8N9L1 334 aa16.6■□□□□ 0.25
SPSB3-210ENST00000568416 MAPK1IP1LQ8NDC0 245 aa16.6■□□□□ 0.25
SPSB3-210ENST00000568416 GTF2H4Q92759 462 aa16.6■□□□□ 0.25
SPSB3-210ENST00000568416 SPATA9Q9BWV2 254 aa16.6■□□□□ 0.25
SPSB3-210ENST00000568416 PIF1Q9H611 641 aa16.6■□□□□ 0.25
SPSB3-210ENST00000568416 BARX1Q9HBU1 254 aaPredicted RBP16.6■□□□□ 0.25
SPSB3-210ENST00000568416 SLC17A5Q9NRA2 495 aa16.6■□□□□ 0.25
SPSB3-210ENST00000568416 B3GALT5Q9Y2C3 310 aa16.6■□□□□ 0.25
SPSB3-210ENST00000568416 PRR14LQ5THK1 2151 aa16.6■□□□□ 0.25
SPSB3-210ENST00000568416 ARID1AO14497 2285 aa16.59■□□□□ 0.25
SPSB3-210ENST00000568416 FAM234BA2RU67 622 aa16.59■□□□□ 0.25
SPSB3-210ENST00000568416 A8MVM7 634 aa16.59■□□□□ 0.25
SPSB3-210ENST00000568416 HOXB9P17482 250 aaPredicted RBP16.59■□□□□ 0.25
SPSB3-210ENST00000568416 PTNP21246 168 aa16.59■□□□□ 0.25
SPSB3-210ENST00000568416 TTKP33981 857 aa16.59■□□□□ 0.25
SPSB3-210ENST00000568416 P2RY4P51582 365 aa16.59■□□□□ 0.25
SPSB3-210ENST00000568416 COPZ1P61923 177 aa16.59■□□□□ 0.25
SPSB3-210ENST00000568416 SLC25A3Q00325 362 aa16.59■□□□□ 0.25
SPSB3-210ENST00000568416 BNIP2Q12982 314 aa16.59■□□□□ 0.25
SPSB3-210ENST00000568416 LARS2Q15031 903 aaKnown RBP16.59■□□□□ 0.25
SPSB3-210ENST00000568416 C6orf10Q5SRN2 563 aa16.59■□□□□ 0.25
SPSB3-210ENST00000568416 BEND6Q5SZJ8 279 aaPredicted RBP16.59■□□□□ 0.25
SPSB3-210ENST00000568416 C9orf135Q5VTT2 229 aa16.59■□□□□ 0.25
SPSB3-210ENST00000568416 SLC22A25Q6T423 547 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms