RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 YRDCQ86U90 279 aaKnown RBP11.4□□□□□ -0.58
SF3B3-206ENST00000565990 ADGRG3Q86Y34 549 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 RBM45Q8IUH3 476 aaKnown RBP11.4□□□□□ -0.58
SF3B3-206ENST00000565990 ZDHHC21Q8IVQ6 265 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 OR10Q1Q8NGQ4 319 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 OR14L1PQ8NHC6 308 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 CPT1CQ8TCG5 803 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 IPCEF1Q8WWN9 437 aaPredicted RBP11.4□□□□□ -0.58
SF3B3-206ENST00000565990 TPD52L3Q96J77 140 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 APOL4Q9BPW4 351 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 ZNF559Q9BR84 538 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 PIGQQ9BRB3 760 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 PRR14Q9BWN1 585 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 TRIM2Q9C040 744 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 AMBRA1Q9C0C7 1298 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 POLR2J2Q9GZM3 115 aaKnown RBP11.4□□□□□ -0.58
SF3B3-206ENST00000565990 POLR2J3Q9H1A7 115 aaKnown RBP11.4□□□□□ -0.58
SF3B3-206ENST00000565990 SCN3BQ9NY72 215 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 TESQ9UGI8 421 aaKnown RBP11.4□□□□□ -0.58
SF3B3-206ENST00000565990 ENPP5Q9UJA9 477 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 SLC13A4Q9UKG4 626 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 VDAC3Q9Y277 283 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 SLC9A8Q9Y2E8 581 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 ZNF337Q9Y3M9 751 aa11.4□□□□□ -0.58
SF3B3-206ENST00000565990 OR2M5A3KFT3 312 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 OR14I1A6ND48 311 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 E9PQ18 207 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 M0R3H8 397 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 SLC1A7O00341 560 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 BCKDKO14874 412 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 GMFGO60234 142 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 E2F6O75461 281 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 CLPXO76031 633 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 ZNF682O95780 498 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 NUDT14O95848 222 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 BMP7P18075 431 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 FKBP2P26885 142 aaKnown RBP11.39□□□□□ -0.59
SF3B3-206ENST00000565990 HTR3AP46098 478 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 OR1E2P47887 323 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 COPZ1P61923 177 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 TOMM20Q15388 145 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 OR1Q1Q15612 314 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 IFI44LQ53G44 452 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 KDM4DQ6B0I6 523 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 OR2T5Q6IEZ7 315 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 ARHGAP11AQ6P4F7 1023 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 ZNF613Q6PF04 617 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 ULK3Q6PHR2 472 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 ENPP6Q6UWR7 440 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 PLEKHM3Q6ZWE6 761 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 GRINAQ7Z429 371 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 FGD2Q7Z6J4 655 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 ZNF554Q86TJ5 538 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 RANBP3LQ86VV4 465 aaPredicted RBP11.39□□□□□ -0.59
SF3B3-206ENST00000565990 TSPYL5Q86VY4 417 aaPredicted RBP11.39□□□□□ -0.59
SF3B3-206ENST00000565990 GHDCQ8N2G8 530 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 TMCO5AQ8N6Q1 288 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 FAM86B1Q8N7N1 296 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 OR2T29Q8NH02 315 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 FCGR1BQ92637 280 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 MED12Q93074 2177 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 HSH2DQ96JZ2 352 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 COX4I2Q96KJ9 171 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 PITX2Q99697 317 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 MCHR1Q99705 422 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 TIMP4Q99727 224 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 WDR12Q9GZL7 423 aaKnown RBP11.39□□□□□ -0.59
SF3B3-206ENST00000565990 TSPAN10Q9H1Z9 355 aaPredicted RBP11.39□□□□□ -0.59
SF3B3-206ENST00000565990 DUSP21Q9H596 190 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 C12orf10Q9HB07 376 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 DKKL1Q9UK85 242 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 ZNF835Q9Y2P0 537 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 LIPGQ9Y5X9 500 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 SPTA1P02549 2419 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 SVILO95425 2214 aa11.39□□□□□ -0.59
SF3B3-206ENST00000565990 SMG1Q96Q15 3661 aaKnown RBP11.38□□□□□ -0.59
SF3B3-206ENST00000565990 A0A0B4J2E0 115 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 A0A1B0GTH9 108 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 A0A1B0GX12 115 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 ZNF99A8MXY4 864 aaPredicted RBP11.38□□□□□ -0.59
SF3B3-206ENST00000565990 FAM47E-STBD1D6RA91 191 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 GABARAPO95166 117 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 LYPD3O95274 346 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 THY1P04216 161 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 PRB1P04280 392 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 GP1BBP13224 206 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 CPN1P15169 458 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 TNFRSF1BP20333 461 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 IGFBP5P24593 272 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 ACVR2AP27037 513 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 SERPINB10P48595 397 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 ENTPD1P49961 510 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 RGS8P57771 180 aaPredicted RBP11.38□□□□□ -0.59
SF3B3-206ENST00000565990 RAC1P63000 192 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 CRYZQ08257 329 aaKnown RBP11.38□□□□□ -0.59
SF3B3-206ENST00000565990 CD47Q08722 323 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 FOXF1Q12946 379 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 ZNF846Q147U1 533 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 NEDD8Q15843 81 aa11.38□□□□□ -0.59
SF3B3-206ENST00000565990 ENTPD8Q5MY95 495 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms