RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 SP5Q6BEB4 398 aaPredicted RBP14.29□□□□□ -0.12
RAB40C-208ENST00000564703 C6orf89Q6UWU4 347 aa14.29□□□□□ -0.12
RAB40C-208ENST00000564703 FAM214BQ7L5A3 538 aa14.29□□□□□ -0.12
RAB40C-208ENST00000564703 RBM45Q8IUH3 476 aaKnown RBP14.29□□□□□ -0.12
RAB40C-208ENST00000564703 ADAMTS16Q8TE57 1224 aa14.29□□□□□ -0.12
RAB40C-208ENST00000564703 TACO1Q9BSH4 297 aaKnown RBP14.29□□□□□ -0.12
RAB40C-208ENST00000564703 POLR2J2Q9GZM3 115 aaKnown RBP14.29□□□□□ -0.12
RAB40C-208ENST00000564703 POLR2J3Q9H1A7 115 aaKnown RBP14.29□□□□□ -0.12
RAB40C-208ENST00000564703 KLHL9Q9P2J3 617 aa14.29□□□□□ -0.12
RAB40C-208ENST00000564703 PLEKHB1Q9UF11 243 aaPredicted RBP14.29□□□□□ -0.12
RAB40C-208ENST00000564703 PRPF19Q9UMS4 504 aaKnown RBP14.29□□□□□ -0.12
RAB40C-208ENST00000564703 KIAA1549Q9HCM3 1950 aa14.29□□□□□ -0.12
RAB40C-208ENST00000564703 LRRK2Q5S007 2527 aa14.29□□□□□ -0.12
RAB40C-208ENST00000564703 IGHV3-15A0A0B4J1V0 119 aa14.28□□□□□ -0.12
RAB40C-208ENST00000564703 A0A0B4J2E0 115 aa14.28□□□□□ -0.12
RAB40C-208ENST00000564703 A0A1B0GX12 115 aa14.28□□□□□ -0.12
RAB40C-208ENST00000564703 ZC3H12DA2A288 527 aaKnown RBP14.28□□□□□ -0.12
RAB40C-208ENST00000564703 NKX2-6A6NCS4 301 aa14.28□□□□□ -0.12
RAB40C-208ENST00000564703 EEF1E1-BLOC1S5C9J1V9 151 aa14.28□□□□□ -0.12
RAB40C-208ENST00000564703 EEF1E1O43324 174 aaKnown RBP14.28□□□□□ -0.12
RAB40C-208ENST00000564703 ATP5HO75947 161 aa14.28□□□□□ -0.12
RAB40C-208ENST00000564703 CLDN1O95832 211 aa14.28□□□□□ -0.12
RAB40C-208ENST00000564703 YES1P07947 543 aa14.28□□□□□ -0.12
RAB40C-208ENST00000564703 TNFRSF1BP20333 461 aa14.28□□□□□ -0.12
RAB40C-208ENST00000564703 OR7A5Q15622 319 aa14.28□□□□□ -0.12
RAB40C-208ENST00000564703 DNAL1Q4LDG9 190 aa14.28□□□□□ -0.12
RAB40C-208ENST00000564703 TMEM225Q6GV28 225 aa14.28□□□□□ -0.12
RAB40C-208ENST00000564703 TTC33Q6PID6 262 aaPredicted RBP14.28□□□□□ -0.12
RAB40C-208ENST00000564703 INTS1Q8N201 2190 aaKnown RBP14.28□□□□□ -0.12
RAB40C-208ENST00000564703 OR4D11Q8NGI4 311 aa14.28□□□□□ -0.12
RAB40C-208ENST00000564703 PIGXQ8TBF5 258 aa14.28□□□□□ -0.12
RAB40C-208ENST00000564703 RNF128Q8TEB7 428 aa14.28□□□□□ -0.12
RAB40C-208ENST00000564703 GEMIN6Q8WXD5 167 aaKnown RBP14.28□□□□□ -0.12
RAB40C-208ENST00000564703 SLC25A36Q96CQ1 311 aa14.28□□□□□ -0.12
RAB40C-208ENST00000564703 MPP4Q96JB8 637 aa14.28□□□□□ -0.12
RAB40C-208ENST00000564703 NSMCE2Q96MF7 247 aa14.28□□□□□ -0.12
RAB40C-208ENST00000564703 THTPAQ9BU02 230 aa14.28□□□□□ -0.12
RAB40C-208ENST00000564703 PCDHAC1Q9H158 963 aa14.28□□□□□ -0.12
RAB40C-208ENST00000564703 GP6Q9HCN6 339 aa14.28□□□□□ -0.12
RAB40C-208ENST00000564703 DCAF13Q9NV06 445 aaKnown RBP14.28□□□□□ -0.12
RAB40C-208ENST00000564703 C6orf203Q9P0P8 240 aaPredicted RBP14.28□□□□□ -0.12
RAB40C-208ENST00000564703 SLC7A7Q9UM01 511 aa14.28□□□□□ -0.12
RAB40C-208ENST00000564703 CLEC4AQ9UMR7 237 aa14.28□□□□□ -0.12
RAB40C-208ENST00000564703 FAM32AQ9Y421 112 aaKnown RBP14.28□□□□□ -0.12
RAB40C-208ENST00000564703 SNX13Q9Y5W8 968 aa14.28□□□□□ -0.12
RAB40C-208ENST00000564703 BAHCC1Q9P281 2608 aa14.28□□□□□ -0.12
RAB40C-208ENST00000564703 ICE1Q9Y2F5 2266 aa14.27□□□□□ -0.12
RAB40C-208ENST00000564703 SPENQ96T58 3664 aaKnown RBP14.27□□□□□ -0.12
RAB40C-208ENST00000564703 LIPT2A6NK58 231 aa14.27□□□□□ -0.13
RAB40C-208ENST00000564703 TMEM229AB2RXF0 380 aa14.27□□□□□ -0.13
RAB40C-208ENST00000564703 CHP2O43745 196 aa14.27□□□□□ -0.13
RAB40C-208ENST00000564703 CYTIPO60759 359 aa14.27□□□□□ -0.13
RAB40C-208ENST00000564703 IMPDH2P12268 514 aa14.27□□□□□ -0.13
RAB40C-208ENST00000564703 KIR2DL2P43627 348 aaPredicted RBP14.27□□□□□ -0.13
RAB40C-208ENST00000564703 RPS5P46782 204 aaKnown RBP14.27□□□□□ -0.13
RAB40C-208ENST00000564703 ASCL1P50553 236 aa14.27□□□□□ -0.13
RAB40C-208ENST00000564703 CDSNQ15517 529 aa14.27□□□□□ -0.13
RAB40C-208ENST00000564703 NPTX1Q15818 432 aa14.27□□□□□ -0.13
RAB40C-208ENST00000564703 VTCN1Q7Z7D3 282 aa14.27□□□□□ -0.13
RAB40C-208ENST00000564703 CYP4Z1Q86W10 505 aa14.27□□□□□ -0.13
RAB40C-208ENST00000564703 C10orf53Q8N6V4 93 aa14.27□□□□□ -0.13
RAB40C-208ENST00000564703 MFSD8Q8NHS3 518 aa14.27□□□□□ -0.13
RAB40C-208ENST00000564703 ABHD3Q8WU67 409 aa14.27□□□□□ -0.13
RAB40C-208ENST00000564703 SLC41A3Q96GZ6 507 aa14.27□□□□□ -0.13
RAB40C-208ENST00000564703 HSH2DQ96JZ2 352 aa14.27□□□□□ -0.13
RAB40C-208ENST00000564703 FNDC11Q9BVV2 318 aa14.27□□□□□ -0.13
RAB40C-208ENST00000564703 FANCFQ9NPI8 374 aa14.27□□□□□ -0.13
RAB40C-208ENST00000564703 RIMS3Q9UJD0 308 aa14.27□□□□□ -0.13
RAB40C-208ENST00000564703 FOXD3Q9UJU5 478 aaPredicted RBP14.27□□□□□ -0.13
RAB40C-208ENST00000564703 PROCRQ9UNN8 238 aa14.27□□□□□ -0.13
RAB40C-208ENST00000564703 MPDZO75970 2070 aa14.26□□□□□ -0.13
RAB40C-208ENST00000564703 TRAV36DV7A0A075B6V5 113 aa14.26□□□□□ -0.13
RAB40C-208ENST00000564703 GPR171O14626 319 aa14.26□□□□□ -0.13
RAB40C-208ENST00000564703 MSTNO14793 375 aa14.26□□□□□ -0.13
RAB40C-208ENST00000564703 SMAD9O15198 467 aaKnown RBP14.26□□□□□ -0.13
RAB40C-208ENST00000564703 SS18L1O75177 396 aaPredicted RBP14.26□□□□□ -0.13
RAB40C-208ENST00000564703 TNFSF13O75888 250 aa14.26□□□□□ -0.13
RAB40C-208ENST00000564703 OR5F1O95221 314 aa14.26□□□□□ -0.13
RAB40C-208ENST00000564703 ST3GAL3Q11203 375 aa14.26□□□□□ -0.13
RAB40C-208ENST00000564703 FOXD4Q12950 439 aaPredicted RBP14.26□□□□□ -0.13
RAB40C-208ENST00000564703 PIN1Q13526 163 aaPredicted RBP14.26□□□□□ -0.13
RAB40C-208ENST00000564703 TRIM25Q14258 630 aaKnown RBP14.26□□□□□ -0.13
RAB40C-208ENST00000564703 MFSD13AQ14CX5 517 aa14.26□□□□□ -0.13
RAB40C-208ENST00000564703 OTUD3Q5T2D3 398 aaPredicted RBP14.26□□□□□ -0.13
RAB40C-208ENST00000564703 FAM69AQ5T7M9 428 aa14.26□□□□□ -0.13
RAB40C-208ENST00000564703 PAQR6Q6TCH4 344 aa14.26□□□□□ -0.13
RAB40C-208ENST00000564703 BTLAQ7Z6A9 289 aa14.26□□□□□ -0.13
RAB40C-208ENST00000564703 LUZP2Q86TE4 346 aa14.26□□□□□ -0.13
RAB40C-208ENST00000564703 STK32CQ86UX6 486 aa14.26□□□□□ -0.13
RAB40C-208ENST00000564703 TUSC5Q8IXB3 177 aa14.26□□□□□ -0.13
RAB40C-208ENST00000564703 OR6K3Q8NGY3 331 aa14.26□□□□□ -0.13
RAB40C-208ENST00000564703 MCUR1Q96AQ8 359 aa14.26□□□□□ -0.13
RAB40C-208ENST00000564703 STARD4Q96DR4 205 aa14.26□□□□□ -0.13
RAB40C-208ENST00000564703 KTI12Q96EK9 354 aaPredicted RBP14.26□□□□□ -0.13
RAB40C-208ENST00000564703 HS6ST2Q96MM7 605 aa14.26□□□□□ -0.13
RAB40C-208ENST00000564703 BTBD10Q9BSF8 475 aa14.26□□□□□ -0.13
RAB40C-208ENST00000564703 TMEM43Q9BTV4 400 aa14.26□□□□□ -0.13
RAB40C-208ENST00000564703 MUC13Q9H3R2 512 aa14.26□□□□□ -0.13
RAB40C-208ENST00000564703 PLSCR4Q9NRQ2 329 aa14.26□□□□□ -0.13
RAB40C-208ENST00000564703 EMC3Q9P0I2 261 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms