RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 TPST1O60507 370 aa16.26■□□□□ 0.19
SYNGR3-204ENST00000564642 MRPL33O75394 65 aaKnown RBP16.26■□□□□ 0.19
SYNGR3-204ENST00000564642 RAF1P04049 648 aa16.26■□□□□ 0.19
SYNGR3-204ENST00000564642 THBDP07204 575 aa16.26■□□□□ 0.19
SYNGR3-204ENST00000564642 KLF10Q13118 480 aa16.26■□□□□ 0.19
SYNGR3-204ENST00000564642 ITGADQ13349 1161 aa16.26■□□□□ 0.19
SYNGR3-204ENST00000564642 SELPLGQ14242 412 aa16.26■□□□□ 0.19
SYNGR3-204ENST00000564642 CAPRIN1Q14444 709 aaKnown RBP16.26■□□□□ 0.19
SYNGR3-204ENST00000564642 TSC22D1Q15714 1073 aa16.26■□□□□ 0.19
SYNGR3-204ENST00000564642 OTUD3Q5T2D3 398 aaPredicted RBP16.26■□□□□ 0.19
SYNGR3-204ENST00000564642 PAQR6Q6TCH4 344 aa16.26■□□□□ 0.19
SYNGR3-204ENST00000564642 PAMR1Q6UXH9 720 aa16.26■□□□□ 0.19
SYNGR3-204ENST00000564642 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.26■□□□□ 0.19
SYNGR3-204ENST00000564642 UBE2J2Q8N2K1 259 aa16.26■□□□□ 0.19
SYNGR3-204ENST00000564642 S100PBPQ96BU1 408 aa16.26■□□□□ 0.19
SYNGR3-204ENST00000564642 USB1Q9BQ65 265 aaKnown RBP16.26■□□□□ 0.19
SYNGR3-204ENST00000564642 SAR1AQ9NR31 198 aa16.26■□□□□ 0.19
SYNGR3-204ENST00000564642 KLHL14Q9P2G3 628 aa16.26■□□□□ 0.19
SYNGR3-204ENST00000564642 LIPT2A6NK58 231 aa16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 ELOA3DA6NLF2 546 aaPredicted RBP16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 RAMP1O60894 148 aa16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 CNOT4O95628 575 aaKnown RBP16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 SLC16A1P53985 500 aa16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 NCALDP61601 193 aa16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 TESK1Q15569 626 aa16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 TRMT5Q32P41 509 aaKnown RBP16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 ELOA3BQ3SY89 546 aa16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 GLIPR1L2Q4G1C9 344 aa16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 BEX5Q5H9J7 111 aa16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 C1orf140Q5VVS0 124 aa16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 ALKBH2Q6NS38 261 aa16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 BHLHA15Q7RTS1 189 aaPredicted RBP16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 ATG4DQ86TL0 474 aaPredicted RBP16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 LSRQ86X29 649 aaPredicted RBP16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 PTOV1Q86YD1 416 aa16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 WFDC8Q8IUA0 241 aa16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 SLC30A8Q8IWU4 369 aa16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 ELOA3Q8NG57 546 aa16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 OR52E4Q8NGH9 312 aa16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 OR10A6Q8NH74 314 aa16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 STK35Q8TDR2 534 aa16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 APH1AQ96BI3 265 aa16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 SH3GL1Q99961 368 aa16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 KAT8Q9H7Z6 458 aaKnown RBP16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 ADPRHL2Q9NX46 363 aa16.25■□□□□ 0.19
SYNGR3-204ENST00000564642 LOC100653049A0A140TA62 436 aa16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 A0A1W2PPR1 153 aa16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 BBIP1A8MTZ0 92 aa16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 MRASO14807 208 aa16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 KRT34O76011 436 aa16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 MFN2O95140 757 aa16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 AKR7A3O95154 331 aa16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 NPPAP01160 153 aa16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 ADSLP30566 484 aaPredicted RBP16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 RGS8P57771 180 aaPredicted RBP16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 COQ5Q5HYK3 327 aa16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 FBXW9Q5XUX1 488 aa16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 TMEM225Q6GV28 225 aa16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 NANOGP8Q6NSW7 305 aa16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 TMEM99Q8N816 258 aa16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 LSMEM1Q8N8F7 131 aa16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 RNF217Q8TC41 542 aa16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 DNAJA4Q8WW22 397 aaPredicted RBP16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 HSD17B8Q92506 261 aa16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 LRRC58Q96CX6 371 aa16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 FOXC2Q99958 501 aa16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 RSPO3Q9BXY4 272 aaPredicted RBP16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 TRIM2Q9C040 744 aa16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 EVA1AQ9H8M9 152 aa16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 NANOGQ9H9S0 305 aa16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 TMEM27Q9HBJ8 222 aa16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 PARPBPQ9NWS1 579 aa16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 SELENONQ9NZV5 590 aa16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 SLC9A8Q9Y2E8 581 aa16.24■□□□□ 0.19
SYNGR3-204ENST00000564642 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.23■□□□□ 0.19
SYNGR3-204ENST00000564642 TMEM229AB2RXF0 380 aa16.23■□□□□ 0.19
SYNGR3-204ENST00000564642 M0QX08 132 aa16.23■□□□□ 0.19
SYNGR3-204ENST00000564642 KLF4O43474 513 aa16.23■□□□□ 0.19
SYNGR3-204ENST00000564642 LYZL6O75951 148 aa16.23■□□□□ 0.19
SYNGR3-204ENST00000564642 AHSA1O95433 338 aa16.23■□□□□ 0.19
SYNGR3-204ENST00000564642 IGHV3-9P01782 118 aa16.23■□□□□ 0.19
SYNGR3-204ENST00000564642 EDNRAP25101 427 aa16.23■□□□□ 0.19
SYNGR3-204ENST00000564642 NR1H2P55055 460 aa16.23■□□□□ 0.19
SYNGR3-204ENST00000564642 DMTNQ08495 405 aa16.23■□□□□ 0.19
SYNGR3-204ENST00000564642 SLC17A1Q14916 467 aa16.23■□□□□ 0.19
SYNGR3-204ENST00000564642 INTS11Q5TA45 600 aaKnown RBP16.23■□□□□ 0.19
SYNGR3-204ENST00000564642 REP15Q6BDI9 236 aa16.23■□□□□ 0.19
SYNGR3-204ENST00000564642 SPNS3Q6ZMD2 512 aa16.23■□□□□ 0.19
SYNGR3-204ENST00000564642 NET1Q7Z628 596 aaPredicted RBP16.23■□□□□ 0.19
SYNGR3-204ENST00000564642 COMTD1Q86VU5 262 aa16.23■□□□□ 0.19
SYNGR3-204ENST00000564642 RANBP3LQ86VV4 465 aaPredicted RBP16.23■□□□□ 0.19
SYNGR3-204ENST00000564642 SNX32Q86XE0 403 aa16.23■□□□□ 0.19
SYNGR3-204ENST00000564642 SMYD1Q8NB12 490 aa16.23■□□□□ 0.19
SYNGR3-204ENST00000564642 PCYOX1LQ8NBM8 494 aa16.23■□□□□ 0.19
SYNGR3-204ENST00000564642 SLC26A7Q8TE54 656 aa16.23■□□□□ 0.19
SYNGR3-204ENST00000564642 ZNF317Q96PQ6 595 aaPredicted RBP16.23■□□□□ 0.19
SYNGR3-204ENST00000564642 ECSITQ9BQ95 431 aa16.23■□□□□ 0.19
SYNGR3-204ENST00000564642 SF3B5Q9BWJ5 86 aaKnown RBP16.23■□□□□ 0.19
SYNGR3-204ENST00000564642 PIF1Q9H611 641 aa16.23■□□□□ 0.19
SYNGR3-204ENST00000564642 C12orf10Q9HB07 376 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms