RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 CDKN1AP38936 164 aa15.14■□□□□ 0.01
VPS9D1-203ENST00000563798 ACAA2P42765 397 aaKnown RBP15.14■□□□□ 0.01
VPS9D1-203ENST00000563798 MAVSQ7Z434 540 aa15.14■□□□□ 0.01
VPS9D1-203ENST00000563798 PRIMA1Q86XR5 153 aa15.14■□□□□ 0.01
VPS9D1-203ENST00000563798 OR52P1PQ8NH57 321 aa15.14■□□□□ 0.01
VPS9D1-203ENST00000563798 PNPT1Q8TCS8 783 aaKnown RBP15.14■□□□□ 0.01
VPS9D1-203ENST00000563798 TLCD1Q96CP7 247 aa15.14■□□□□ 0.01
VPS9D1-203ENST00000563798 TPT1P8Q9HAU6 139 aa15.14■□□□□ 0.01
VPS9D1-203ENST00000563798 BARX1Q9HBU1 254 aaPredicted RBP15.14■□□□□ 0.01
VPS9D1-203ENST00000563798 ZC3H12DA2A288 527 aaKnown RBP15.13■□□□□ 0.01
VPS9D1-203ENST00000563798 CCT8L1PA6NM43 557 aa15.13■□□□□ 0.01
VPS9D1-203ENST00000563798 KITP10721 976 aa15.13■□□□□ 0.01
VPS9D1-203ENST00000563798 CD40P25942 277 aa15.13■□□□□ 0.01
VPS9D1-203ENST00000563798 PCSK6P29122 969 aa15.13■□□□□ 0.01
VPS9D1-203ENST00000563798 CRISP3P54108 245 aa15.13■□□□□ 0.01
VPS9D1-203ENST00000563798 CDH11P55287 796 aa15.13■□□□□ 0.01
VPS9D1-203ENST00000563798 FOXG1P55316 489 aaPredicted RBP15.13■□□□□ 0.01
VPS9D1-203ENST00000563798 PPP2R2BQ00005 443 aa15.13■□□□□ 0.01
VPS9D1-203ENST00000563798 FAPQ12884 760 aa15.13■□□□□ 0.01
VPS9D1-203ENST00000563798 VEZF1Q14119 521 aa15.13■□□□□ 0.01
VPS9D1-203ENST00000563798 SLC9B1Q4ZJI4 515 aa15.13■□□□□ 0.01
VPS9D1-203ENST00000563798 LIN52Q52LA3 116 aa15.13■□□□□ 0.01
VPS9D1-203ENST00000563798 RNF220Q5VTB9 566 aa15.13■□□□□ 0.01
VPS9D1-203ENST00000563798 AGAP6Q5VW22 663 aa15.13■□□□□ 0.01
VPS9D1-203ENST00000563798 KLHL17Q6TDP4 642 aa15.13■□□□□ 0.01
VPS9D1-203ENST00000563798 WDR31Q8NA23 367 aa15.13■□□□□ 0.01
VPS9D1-203ENST00000563798 OR52N5Q8NH56 324 aa15.13■□□□□ 0.01
VPS9D1-203ENST00000563798 SLC38A5Q8WUX1 472 aa15.13■□□□□ 0.01
VPS9D1-203ENST00000563798 ITCHQ96J02 903 aa15.13■□□□□ 0.01
VPS9D1-203ENST00000563798 REG4Q9BYZ8 158 aa15.13■□□□□ 0.01
VPS9D1-203ENST00000563798 ALG2Q9H553 416 aa15.13■□□□□ 0.01
VPS9D1-203ENST00000563798 RMND5AQ9H871 391 aa15.13■□□□□ 0.01
VPS9D1-203ENST00000563798 SLC7A10Q9NS82 523 aa15.13■□□□□ 0.01
VPS9D1-203ENST00000563798 RLIMQ9NVW2 624 aa15.13■□□□□ 0.01
VPS9D1-203ENST00000563798 JMJD1CQ15652 2540 aa15.12■□□□□ 0.01
VPS9D1-203ENST00000563798 LIPT2A6NK58 231 aa15.12■□□□□ 0.01
VPS9D1-203ENST00000563798 INAFM1C9JVW0 142 aa15.12■□□□□ 0.01
VPS9D1-203ENST00000563798 E7EQL1 145 aa15.12■□□□□ 0.01
VPS9D1-203ENST00000563798 GPIP06744 558 aa15.12■□□□□ 0.01
VPS9D1-203ENST00000563798 ETFAP13804 333 aa15.12■□□□□ 0.01
VPS9D1-203ENST00000563798 CXCR1P25024 350 aa15.12■□□□□ 0.01
VPS9D1-203ENST00000563798 TTKP33981 857 aa15.12■□□□□ 0.01
VPS9D1-203ENST00000563798 MRPL19P49406 292 aaKnown RBP15.12■□□□□ 0.01
VPS9D1-203ENST00000563798 DSTNP60981 165 aa15.12■□□□□ 0.01
VPS9D1-203ENST00000563798 NRF1Q16656 503 aa15.12■□□□□ 0.01
VPS9D1-203ENST00000563798 NXNQ6DKJ4 435 aa15.12■□□□□ 0.01
VPS9D1-203ENST00000563798 WBP2NLQ6ICG8 309 aa15.12■□□□□ 0.01
VPS9D1-203ENST00000563798 C11orf71Q6IPW1 123 aa15.12■□□□□ 0.01
VPS9D1-203ENST00000563798 ZNF836Q6ZNA1 936 aa15.12■□□□□ 0.01
VPS9D1-203ENST00000563798 VRK2Q86Y07 508 aa15.12■□□□□ 0.01
VPS9D1-203ENST00000563798 ZIC4Q8N9L1 334 aa15.12■□□□□ 0.01
VPS9D1-203ENST00000563798 OR52E4Q8NGH9 312 aa15.12■□□□□ 0.01
VPS9D1-203ENST00000563798 SLC35B4Q969S0 331 aa15.12■□□□□ 0.01
VPS9D1-203ENST00000563798 ZBTB9Q96C00 473 aa15.12■□□□□ 0.01
VPS9D1-203ENST00000563798 DNAJA3Q96EY1 480 aa15.12■□□□□ 0.01
VPS9D1-203ENST00000563798 DHRS9Q9BPW9 319 aa15.12■□□□□ 0.01
VPS9D1-203ENST00000563798 NKIRAS1Q9NYS0 192 aa15.12■□□□□ 0.01
VPS9D1-203ENST00000563798 CHST2Q9Y4C5 530 aa15.12■□□□□ 0.01
VPS9D1-203ENST00000563798 A0A0G2JPF8 293 aa15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 AQP7P3A6NL99 342 aa15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 HNRNPCL2B2RXH8 293 aa15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 HNRNPCL3B7ZW38 293 aa15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 RNF223E7ERA6 249 aa15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 UBDO15205 165 aa15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 HNRNPCL1O60812 293 aaKnown RBP15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 NPIPB7O75200 414 aa15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 HNRNPCL4P0DMR1 293 aa15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 BMP2P12643 396 aa15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 ACVR1BP36896 505 aa15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 CRATP43155 626 aa15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 MAGOHP61326 146 aaKnown RBP15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 OTUD3Q5T2D3 398 aaPredicted RBP15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 TSPO2Q5TGU0 170 aa15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 PRAMEF8Q5VWM4 474 aa15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 PRAMEF7Q5VXH5 474 aa15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 CASP12Q6UXS9 341 aa15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 MGARPQ8TDB4 240 aa15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 OR52B2Q96RD2 323 aa15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 SPATA9Q9BWV2 254 aa15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 TMBIM4Q9HC24 238 aa15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 BCL2L10Q9HD36 194 aa15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 SLC17A5Q9NRA2 495 aa15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 CBLN4Q9NTU7 201 aa15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 ZNF443Q9Y2A4 671 aaPredicted RBP15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 B3GALT5Q9Y2C3 310 aa15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 AMDHD2Q9Y303 409 aa15.11■□□□□ 0.01
VPS9D1-203ENST00000563798 A0A096LPI6 279 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 FAM234BA2RU67 622 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 A8MVM7 634 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 FZD7O75084 574 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 NDUFS7O75251 213 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 CRLF1O75462 422 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 VAMP5O95183 116 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 ANP32DO95626 131 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 BCHEP06276 602 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 GKN3PP0CG01 181 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 HOXB9P17482 250 aaPredicted RBP15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 MPGP29372 298 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 ZNF83P51522 516 aa15.1■□□□□ 0.01
VPS9D1-203ENST00000563798 P2RY4P51582 365 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms