RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 MCTS1Q9ULC4 181 aaKnown RBP5.53□□□□□ -1.52
CNOT1-204ENST00000563130 TMED7Q9Y3B3 224 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 SPIN1Q9Y657 262 aaPredicted RBP5.53□□□□□ -1.52
CNOT1-204ENST00000563130 A0A1W2PNV4 684 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 TMEM72A0PK05 275 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 ELOVL7A1L3X0 281 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 ZC3H12DA2A288 527 aaKnown RBP5.53□□□□□ -1.52
CNOT1-204ENST00000563130 NKX2-6A6NCS4 301 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 PRSS44E7EML9 344 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 NDUFAB1O14561 156 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 FMO6PO60774 539 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 PMS2P2O95744 297 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 CGAP01215 116 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 FESP07332 822 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 ENPP1P22413 925 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 SLC7A1P30825 629 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 KDELR2P33947 212 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 CPA2P48052 419 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 GSK3BP49841 420 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 DIO1P49895 249 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 AGFG1P52594 562 aaKnown RBP5.53□□□□□ -1.52
CNOT1-204ENST00000563130 PSME3P61289 254 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 COPZ1P61923 177 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 H3F3AP84243 136 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 LIPEQ05469 1076 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 MYBPHQ13203 477 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 FXNQ16595 210 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 EEF1A1P5Q5VTE0 462 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 LSRQ86X29 649 aaPredicted RBP5.53□□□□□ -1.52
CNOT1-204ENST00000563130 MICU2Q8IYU8 434 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 INTS1Q8N201 2190 aaKnown RBP5.53□□□□□ -1.52
CNOT1-204ENST00000563130 CADM2Q8N3J6 435 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 ATP6V1C2Q8NEY4 427 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 OR4D11Q8NGI4 311 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 STARD4Q96DR4 205 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 OR11A1Q9GZK7 315 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 PCDHAC1Q9H158 963 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 GP6Q9HCN6 339 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 SPAG4Q9NPE6 437 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 TIGARQ9NQ88 270 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 KLHL28Q9NXS3 571 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 ING1Q9UK53 422 aaPredicted RBP5.53□□□□□ -1.52
CNOT1-204ENST00000563130 TRAPPC4Q9Y296 219 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 HDGFL3Q9Y3E1 203 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 A0A0B4J2E0 115 aa5.52□□□□□ -1.53
CNOT1-204ENST00000563130 A0A1B0GWA3 101 aa5.52□□□□□ -1.53
CNOT1-204ENST00000563130 A0A1B0GX12 115 aa5.52□□□□□ -1.53
CNOT1-204ENST00000563130 FAM90A27PA6NNH2 459 aa5.52□□□□□ -1.53
CNOT1-204ENST00000563130 SMAD9O15198 467 aaKnown RBP5.52□□□□□ -1.53
CNOT1-204ENST00000563130 DNPH1O43598 174 aa5.52□□□□□ -1.53
CNOT1-204ENST00000563130 FZD7O75084 574 aa5.52□□□□□ -1.53
CNOT1-204ENST00000563130 SS18L1O75177 396 aaPredicted RBP5.52□□□□□ -1.53
CNOT1-204ENST00000563130 SMNDC1O75940 238 aaKnown RBP eCLIP5.52□□□□□ -1.53
CNOT1-204ENST00000563130 T-ENOLP0DO92 83 aa5.52□□□□□ -1.53
CNOT1-204ENST00000563130 IMPDH2P12268 514 aa5.52□□□□□ -1.53
CNOT1-204ENST00000563130 RGS8P57771 180 aaPredicted RBP5.52□□□□□ -1.53
CNOT1-204ENST00000563130 EGR4Q05215 589 aa5.52□□□□□ -1.53
CNOT1-204ENST00000563130 NPTX1Q15818 432 aa5.52□□□□□ -1.53
CNOT1-204ENST00000563130 SP5Q6BEB4 398 aaPredicted RBP5.52□□□□□ -1.53
CNOT1-204ENST00000563130 FAM214BQ7L5A3 538 aa5.52□□□□□ -1.53
CNOT1-204ENST00000563130 P4HA3Q7Z4N8 544 aa5.52□□□□□ -1.53
CNOT1-204ENST00000563130 WFDC8Q8IUA0 241 aa5.52□□□□□ -1.53
CNOT1-204ENST00000563130 PGAM4Q8N0Y7 254 aa5.52□□□□□ -1.53
CNOT1-204ENST00000563130 OR6T1Q8NGN1 323 aa5.52□□□□□ -1.53
CNOT1-204ENST00000563130 BCAS4Q8TDM0 211 aa5.52□□□□□ -1.53
CNOT1-204ENST00000563130 ROBO4Q8WZ75 1007 aa5.52□□□□□ -1.53
CNOT1-204ENST00000563130 SLC38A4Q969I6 547 aa5.52□□□□□ -1.53
CNOT1-204ENST00000563130 GMPPAQ96IJ6 420 aaPredicted RBP5.52□□□□□ -1.53
CNOT1-204ENST00000563130 OR5B2Q96R09 309 aa5.52□□□□□ -1.53
CNOT1-204ENST00000563130 POTEKPQ9BYX7 375 aa5.52□□□□□ -1.53
CNOT1-204ENST00000563130 TRIM2Q9C040 744 aa5.52□□□□□ -1.53
CNOT1-204ENST00000563130 GLRX2Q9NS18 164 aa5.52□□□□□ -1.53
CNOT1-204ENST00000563130 UTP20O75691 2785 aaKnown RBP5.52□□□□□ -1.53
CNOT1-204ENST00000563130 HCFC1P51610 2035 aa5.52□□□□□ -1.53
CNOT1-204ENST00000563130 A8MVM7 634 aa5.51□□□□□ -1.53
CNOT1-204ENST00000563130 A8MXE2 369 aa5.51□□□□□ -1.53
CNOT1-204ENST00000563130 M0R3H8 397 aa5.51□□□□□ -1.53
CNOT1-204ENST00000563130 SULT2B1O00204 365 aa5.51□□□□□ -1.53
CNOT1-204ENST00000563130 MSTNO14793 375 aa5.51□□□□□ -1.53
CNOT1-204ENST00000563130 CYTIPO60759 359 aa5.51□□□□□ -1.53
CNOT1-204ENST00000563130 SYNGR4O95473 234 aa5.51□□□□□ -1.53
CNOT1-204ENST00000563130 CD8BP10966 210 aa5.51□□□□□ -1.53
CNOT1-204ENST00000563130 KLK2P20151 261 aa5.51□□□□□ -1.53
CNOT1-204ENST00000563130 CXCR1P25024 350 aa5.51□□□□□ -1.53
CNOT1-204ENST00000563130 CPOXP36551 454 aa5.51□□□□□ -1.53
CNOT1-204ENST00000563130 PCYT1AP49585 367 aa5.51□□□□□ -1.53
CNOT1-204ENST00000563130 ASCL1P50553 236 aa5.51□□□□□ -1.53
CNOT1-204ENST00000563130 SELENOWP63302 87 aa5.51□□□□□ -1.53
CNOT1-204ENST00000563130 CSNK2A1P68400 391 aaPredicted RBP5.51□□□□□ -1.53
CNOT1-204ENST00000563130 RNPS1Q15287 305 aaKnown RBP5.51□□□□□ -1.53
CNOT1-204ENST00000563130 HIST2H2BCQ6DN03 193 aa5.51□□□□□ -1.53
CNOT1-204ENST00000563130 ABLIM2Q6H8Q1 611 aa5.51□□□□□ -1.53
CNOT1-204ENST00000563130 VWA1Q6PCB0 445 aa5.51□□□□□ -1.53
CNOT1-204ENST00000563130 ULK3Q6PHR2 472 aa5.51□□□□□ -1.53
CNOT1-204ENST00000563130 FCRLAQ7L513 359 aa5.51□□□□□ -1.53
CNOT1-204ENST00000563130 TSPYL5Q86VY4 417 aaPredicted RBP5.51□□□□□ -1.53
CNOT1-204ENST00000563130 RBM45Q8IUH3 476 aaKnown RBP5.51□□□□□ -1.53
CNOT1-204ENST00000563130 SLC43A2Q8N370 569 aa5.51□□□□□ -1.53
CNOT1-204ENST00000563130 OR52E4Q8NGH9 312 aa5.51□□□□□ -1.53
CNOT1-204ENST00000563130 ABHD3Q8WU67 409 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms