RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 LRIG1Q96JA1 1093 aa12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 IL17FQ96PD4 163 aa12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 TBX5Q99593 518 aa12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 PLA2G2FQ9BZM2 168 aa12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 BHLHE41Q9C0J9 482 aaPredicted RBP12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 SGK2Q9HBY8 427 aa12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 TM7SF3Q9NS93 570 aa12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 ASF1BQ9NVP2 202 aa12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 KLK11Q9UBX7 282 aa12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 GON4LQ3T8J9 2241 aa12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 DOCK8Q8NF50 2099 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 UBE2QL1A1L167 161 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 LINC01565O15544 149 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 FMO6PO60774 539 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 CD63P08962 238 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 MAPK3P27361 379 aaPredicted RBP12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 LUMP51884 338 aaPredicted RBP12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 SMIM11AP58511 58 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 SLC3A1Q07837 685 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 ELAVL3Q14576 367 aaKnown RBP12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 KLHL26Q53HC5 615 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 CD300LDQ6UXZ3 194 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 RTL10Q7L3V2 364 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 OR2W3Q7Z3T1 314 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 ZNF480Q8WV37 535 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 RPP25Q9BUL9 199 aaKnown RBP12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 CACYBPQ9HB71 228 aaKnown RBP12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 FBXL3Q9UKT7 428 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 A0A1W2PPK0 400 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 SERTM1A2A2V5 107 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 EPOPA6NHQ4 379 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 C2orf74A8MZ97 194 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 E9PI62 339 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 SLC25A12O75746 678 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 UBXN7O94888 489 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 IGHA1P01876 353 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 RB1P06400 928 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 ZNF8P17098 575 aaPredicted RBP12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 AHRP35869 848 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 PPT1P50897 306 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 PPIAP62937 165 aaKnown RBP12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 EEF1A1P68104 462 aaKnown RBP12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 CNTN1Q12860 1018 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 IER5LQ5T953 404 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 EEF1A1P5Q5VTE0 462 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 TNFAIP8L2Q6P589 184 aaPredicted RBP12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 ZSCAN1Q8NBB4 408 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 OR51G2Q8NGK0 314 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 STK35Q8TDR2 534 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 WFIKKN2Q8TEU8 576 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 SLC38A5Q8WUX1 472 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 SUSD6Q92537 303 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 KLK6Q92876 244 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 TMEM41AQ96HV5 264 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 ZNF75AQ96N20 296 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 KXD1Q9BQD3 176 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 FNDC11Q9BVV2 318 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 WDR13Q9H1Z4 485 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 A4GNTQ9UNA3 340 aa12.95□□□□□ -0.34
GTF3C1-203ENST00000562609 EDDM13A0A1B0GTR0 161 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 NAP1L6A6NFF2 107 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 C1orf196B1AJZ1 125 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 CTDSPLO15194 276 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 SLC16A5O15375 505 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 HYAL3O43820 417 aaPredicted RBP12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 IL5P05113 134 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 STAT5AP42229 794 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 TMEM71Q6P5X7 295 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 C11orf88Q6PI97 169 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 VITQ6UXI7 678 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 CXXC5Q7LFL8 322 aaKnown RBP12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 SIRT6Q8N6T7 355 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 ZFPM2Q8WW38 1151 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 LGR4Q9BXB1 951 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 MTIF3Q9H2K0 278 aaKnown RBP12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 TMEM185BQ9H7F4 350 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 KCNK12Q9HB15 430 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 A0A1B0GTQ1 180 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 M0R3H8 397 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 SC5DO75845 299 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 VSIG10L2P0DP72 767 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 SAGP10523 405 aaPredicted RBP12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 P2RY2P41231 377 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 TBPL1P62380 186 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 PEA15Q15121 130 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 FAM180BQ6P0A1 224 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 FAM83HQ6ZRV2 1179 aaPredicted RBP12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 ABHD4Q8TB40 342 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 TMEM19Q96HH6 336 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 FAM117AQ9C073 453 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 REEP4Q9H6H4 257 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 ACSS1Q9NUB1 689 aaPredicted RBP12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 A0A1W2PPE3 182 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 C1orf105O95561 183 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 MUC1P15941 1255 aaPredicted RBP12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 GJA4P35212 333 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 AP3S2P59780 193 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 AADACL4Q5VUY2 407 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 MISPQ8IVT2 679 aa12.94□□□□□ -0.34
GTF3C1-203ENST00000562609 DCUN1D3Q8IWE4 304 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms