RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 SH3GL1Q99961 368 aa13.66□□□□□ -0.22
CCNDBP1-203ENST00000562553 ECSITQ9BQ95 431 aa13.66□□□□□ -0.22
CCNDBP1-203ENST00000562553 POTEKPQ9BYX7 375 aa13.66□□□□□ -0.22
CCNDBP1-203ENST00000562553 KLHL4Q9C0H6 718 aa13.66□□□□□ -0.22
CCNDBP1-203ENST00000562553 NSRP1Q9H0G5 558 aaKnown RBP13.66□□□□□ -0.22
CCNDBP1-203ENST00000562553 MYLK2Q9H1R3 596 aa13.66□□□□□ -0.22
CCNDBP1-203ENST00000562553 GID8Q9NWU2 228 aa13.66□□□□□ -0.22
CCNDBP1-203ENST00000562553 KLHL28Q9NXS3 571 aa13.66□□□□□ -0.22
CCNDBP1-203ENST00000562553 GMPR2Q9P2T1 348 aaKnown RBP13.66□□□□□ -0.22
CCNDBP1-203ENST00000562553 PRDM4Q9UKN5 801 aa13.66□□□□□ -0.22
CCNDBP1-203ENST00000562553 HRNRQ86YZ3 2850 aaPredicted RBP13.66□□□□□ -0.22
CCNDBP1-203ENST00000562553 LIPT2A6NK58 231 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 CCT8L1PA6NM43 557 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 ZNF724A8MTY0 619 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 A8MVM7 634 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 C16orf97H3BN30 126 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 AIM2O14862 343 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 NPIPB7O75200 414 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 LGI1O95970 557 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 CD247P20963 164 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 IDUAP35475 653 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 SLC35A1P78382 337 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 H3F3AP84243 136 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 EGR4Q05215 589 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 CEACAM7Q14002 265 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 DAZAP2Q15038 168 aaPredicted RBP13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 TESK1Q15569 626 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 OR7A5Q15622 319 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 C6orf89Q6UWU4 347 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 CPLX4Q7Z7G2 160 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 PATL1Q86TB9 770 aaKnown RBP13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 LSMEM1Q8N8F7 131 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 OR52E4Q8NGH9 312 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 OR4D11Q8NGI4 311 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 NRGNQ92686 78 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 ZNF583Q96ND8 569 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 DACH2Q96NX9 599 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 ARHGDIGQ99819 225 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 TACO1Q9BSH4 297 aaKnown RBP13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 RASSF1Q9NS23 344 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 CMTM6Q9NX76 183 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 RPS6KB2Q9UBS0 482 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 TESQ9UGI8 421 aaKnown RBP13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 PRSS50Q9UI38 385 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 SLC13A4Q9UKG4 626 aa13.65□□□□□ -0.22
CCNDBP1-203ENST00000562553 IGKV3D-15A0A087WSY6 115 aa13.64□□□□□ -0.23
CCNDBP1-203ENST00000562553 NTF4P34130 210 aa13.64□□□□□ -0.23
CCNDBP1-203ENST00000562553 OR3A2P47893 321 aa13.64□□□□□ -0.23
CCNDBP1-203ENST00000562553 NCALDP61601 193 aa13.64□□□□□ -0.23
CCNDBP1-203ENST00000562553 PDK3Q15120 406 aa13.64□□□□□ -0.23
CCNDBP1-203ENST00000562553 POU4F3Q15319 338 aa13.64□□□□□ -0.23
CCNDBP1-203ENST00000562553 OR1Q1Q15612 314 aa13.64□□□□□ -0.23
CCNDBP1-203ENST00000562553 TSC22D1Q15714 1073 aa13.64□□□□□ -0.23
CCNDBP1-203ENST00000562553 NPTX1Q15818 432 aa13.64□□□□□ -0.23
CCNDBP1-203ENST00000562553 NRF1Q16656 503 aa13.64□□□□□ -0.23
CCNDBP1-203ENST00000562553 INTS11Q5TA45 600 aaKnown RBP13.64□□□□□ -0.23
CCNDBP1-203ENST00000562553 C1orf140Q5VVS0 124 aa13.64□□□□□ -0.23
CCNDBP1-203ENST00000562553 BEND4Q6ZU67 534 aa13.64□□□□□ -0.23
CCNDBP1-203ENST00000562553 CCDC80Q76M96 950 aa13.64□□□□□ -0.23
CCNDBP1-203ENST00000562553 STK32CQ86UX6 486 aa13.64□□□□□ -0.23
CCNDBP1-203ENST00000562553 BHLHE22Q8NFJ8 381 aaPredicted RBP13.64□□□□□ -0.23
CCNDBP1-203ENST00000562553 PIGXQ8TBF5 258 aa13.64□□□□□ -0.23
CCNDBP1-203ENST00000562553 STK35Q8TDR2 534 aa13.64□□□□□ -0.23
CCNDBP1-203ENST00000562553 ZC3HAV1LQ96H79 300 aaKnown RBP13.64□□□□□ -0.23
CCNDBP1-203ENST00000562553 PTDSS2Q9BVG9 487 aa13.64□□□□□ -0.23
CCNDBP1-203ENST00000562553 TRIM2Q9C040 744 aa13.64□□□□□ -0.23
CCNDBP1-203ENST00000562553 NDRG3Q9UGV2 375 aa13.64□□□□□ -0.23
CCNDBP1-203ENST00000562553 IGKV1D-42A0A075B6H8 117 aa13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 A0A0B4J2E0 115 aa13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 A0A1B0GX12 115 aa13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 ELOA3DA6NLF2 546 aaPredicted RBP13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 FAM220BPB1ANY3 271 aa13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 SIAH2O43255 324 aa13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 AKR7A3O95154 331 aa13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 GPIP06744 558 aa13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 PTNP21246 168 aa13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 SLC16A1P53985 500 aa13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 ELOA3BQ3SY89 546 aa13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 ALG10BQ5I7T1 473 aa13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 OTUD3Q5T2D3 398 aaPredicted RBP13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 PAQR6Q6TCH4 344 aa13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 GALNT5Q7Z7M9 940 aa13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 CXorf67Q86X51 503 aaPredicted RBP13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 RBM45Q8IUH3 476 aaKnown RBP13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 P3H2Q8IVL5 708 aa13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 GABRG1Q8N1C3 465 aa13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 TMEM99Q8N816 258 aa13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 ELOA3Q8NG57 546 aa13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 OR6T1Q8NGN1 323 aa13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 VANGL1Q8TAA9 524 aaPredicted RBP13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 KTI12Q96EK9 354 aaPredicted RBP13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 NAA11Q9BSU3 229 aaPredicted RBP13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 MED18Q9BUE0 208 aa13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 POLDIP3Q9BY77 421 aaKnown RBP13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 CLEC4MQ9H2X3 399 aaPredicted RBP13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 C12orf10Q9HB07 376 aa13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 ADPRHL2Q9NX46 363 aa13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 EMC3Q9P0I2 261 aa13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 MED13LQ71F56 2210 aa13.63□□□□□ -0.23
CCNDBP1-203ENST00000562553 A0A1W2PPR1 153 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms