RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 COX18Q8N8Q8 333 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 ZNF527Q8NB42 609 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 ZNF540Q8NDQ6 660 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 NUP43Q8NFH3 380 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 METTL6Q8TCB7 284 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 AGR3Q8TD06 166 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 FAM216AQ8WUB2 273 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 HPS1Q92902 700 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 GCDHQ92947 438 aaPredicted RBP8.63□□□□□ -1.03
TPM1-225ENST00000560679 APH1AQ96BI3 265 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 CMTM5Q96DZ9 223 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 VRK1Q99986 396 aaPredicted RBP8.63□□□□□ -1.03
TPM1-225ENST00000560679 QRSL1Q9H0R6 528 aaKnown RBP8.63□□□□□ -1.03
TPM1-225ENST00000560679 C1orf21Q9H246 121 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 GSTO2Q9H4Y5 243 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 DENND2DQ9H6A0 471 aaPredicted RBP8.63□□□□□ -1.03
TPM1-225ENST00000560679 ZNF385DQ9H6B1 395 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 RNPEPL1Q9HAU8 725 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 SLC17A5Q9NRA2 495 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 ASB6Q9NWX5 421 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 GIN1Q9NXP7 522 aa8.63□□□□□ -1.03
TPM1-225ENST00000560679 NOP53Q9NZM5 478 aaKnown RBP8.63□□□□□ -1.03
TPM1-225ENST00000560679 A0A0G2JK05 382 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 SERTM1A2A2V5 107 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 SERINC4A6NH21 518 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 SDHDO14521 159 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 PDPK1O15530 556 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 IGFBP1P08833 259 aaPredicted RBP8.62□□□□□ -1.03
TPM1-225ENST00000560679 COX4I1P13073 169 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 IMPDH1P20839 514 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 EPHA3P29320 983 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 DIO1P49895 249 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 PPOXP50336 477 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 FOXA1P55317 472 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 HILS1P60008 231 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 CCNIQ14094 377 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 PDK3Q15120 406 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 QPRTQ15274 297 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 ADIPOQQ15848 244 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 PDCD2Q16342 344 aaPredicted RBP8.62□□□□□ -1.03
TPM1-225ENST00000560679 TRMT5Q32P41 509 aaKnown RBP8.62□□□□□ -1.03
TPM1-225ENST00000560679 LSM12Q3MHD2 195 aaKnown RBP8.62□□□□□ -1.03
TPM1-225ENST00000560679 AWAT1Q58HT5 328 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 OR7E24Q6IFN5 339 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 IKBIPQ70UQ0 350 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 SZRD1Q7Z422 152 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 PEG10Q86TG7 708 aaKnown RBP8.62□□□□□ -1.03
TPM1-225ENST00000560679 C17orf78Q8N4C9 275 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 POU5F2Q8N7G0 328 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 MAELQ96JY0 434 aaKnown RBP8.62□□□□□ -1.03
TPM1-225ENST00000560679 EGLN2Q96KS0 407 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 NUF2Q9BZD4 464 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 WDR55Q9H6Y2 383 aaPredicted RBP8.62□□□□□ -1.03
TPM1-225ENST00000560679 CA10Q9NS85 328 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 EMC3Q9P0I2 261 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 AMDHD2Q9Y303 409 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 NOSIPQ9Y314 301 aaKnown RBP8.62□□□□□ -1.03
TPM1-225ENST00000560679 NOTCH1P46531 2555 aa8.62□□□□□ -1.03
TPM1-225ENST00000560679 IGHV1-18A0A0C4DH31 117 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 TMEM233B4DJY2 109 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 NPIPB8E9PQR5 432 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 NPIPB9F8W1W9 429 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 SUPT7LO94864 414 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 ALOX5P09917 674 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 DAOP14920 347 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 GPC1P35052 558 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 SERPINF1P36955 418 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 FRKP42685 505 aaPredicted RBP8.61□□□□□ -1.03
TPM1-225ENST00000560679 SLC16A1P53985 500 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 NAA20P61599 178 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 POU6F2P78424 691 aaPredicted RBP8.61□□□□□ -1.03
TPM1-225ENST00000560679 RIN1Q13671 783 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 KPNB1Q14974 876 aaKnown RBP8.61□□□□□ -1.03
TPM1-225ENST00000560679 EFNB3Q15768 340 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 TIGD2Q4W5G0 525 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 NXNQ6DKJ4 435 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 NOXRED1Q6NXP6 359 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 TMPPEQ6ZT21 453 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 SPATA19Q7Z5L4 167 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 NET1Q7Z628 596 aaPredicted RBP8.61□□□□□ -1.03
TPM1-225ENST00000560679 C1orf162Q8NEQ5 155 aaPredicted RBP8.61□□□□□ -1.03
TPM1-225ENST00000560679 TOR1AIP2Q8NFQ8 470 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 OR5W2Q8NH69 310 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 CEP70Q8NHQ1 597 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 JADE3Q92613 823 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 CDS1Q92903 461 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 DNAJA3Q96EY1 480 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 ZNF764Q96H86 408 aaPredicted RBP8.61□□□□□ -1.03
TPM1-225ENST00000560679 BTBD2Q9BX70 525 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 PLK3Q9H4B4 646 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 ZNF696Q9H7X3 374 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 MEAF6Q9HAF1 191 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 SIRT3Q9NTG7 399 aaPredicted RBP8.61□□□□□ -1.03
TPM1-225ENST00000560679 MRGBPQ9NV56 204 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 SPEF1Q9Y4P9 236 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 PCDHGB1Q9Y5G3 927 aa8.61□□□□□ -1.03
TPM1-225ENST00000560679 B9A039 149 aa8.6□□□□□ -1.03
TPM1-225ENST00000560679 SULT2B1O00204 365 aa8.6□□□□□ -1.03
TPM1-225ENST00000560679 DNAJA2O60884 412 aa8.6□□□□□ -1.03
TPM1-225ENST00000560679 ENTPD5O75356 428 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms