RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 AQP12AQ8IXF9 295 aa8.09□□□□□ -1.11
HMG20A-209ENST00000559728 OFCC1Q8IZS5 231 aa8.09□□□□□ -1.11
HMG20A-209ENST00000559728 PIK3C3Q8NEB9 887 aa8.09□□□□□ -1.11
HMG20A-209ENST00000559728 FNDC9Q8TBE3 224 aa8.09□□□□□ -1.11
HMG20A-209ENST00000559728 STK35Q8TDR2 534 aa8.09□□□□□ -1.11
HMG20A-209ENST00000559728 SLC25A43Q8WUT9 341 aaPredicted RBP8.09□□□□□ -1.11
HMG20A-209ENST00000559728 TMEM255BQ8WV15 326 aa8.09□□□□□ -1.11
HMG20A-209ENST00000559728 LZICQ8WZA0 190 aa8.09□□□□□ -1.11
HMG20A-209ENST00000559728 OSTF1Q92882 214 aa8.09□□□□□ -1.11
HMG20A-209ENST00000559728 TAAR8Q969N4 342 aa8.09□□□□□ -1.11
HMG20A-209ENST00000559728 SLC47A1Q96FL8 570 aa8.09□□□□□ -1.11
HMG20A-209ENST00000559728 CCDC120Q96HB5 630 aa8.09□□□□□ -1.11
HMG20A-209ENST00000559728 PRRC1Q96M27 445 aa8.09□□□□□ -1.11
HMG20A-209ENST00000559728 ZNF300Q96RE9 604 aaPredicted RBP8.09□□□□□ -1.11
HMG20A-209ENST00000559728 TRIB1Q96RU8 372 aa8.09□□□□□ -1.11
HMG20A-209ENST00000559728 VKORC1Q9BQB6 163 aa8.09□□□□□ -1.11
HMG20A-209ENST00000559728 POTEKPQ9BYX7 375 aa8.09□□□□□ -1.11
HMG20A-209ENST00000559728 POLR2J2Q9GZM3 115 aaKnown RBP8.09□□□□□ -1.11
HMG20A-209ENST00000559728 POLR2J3Q9H1A7 115 aaKnown RBP8.09□□□□□ -1.11
HMG20A-209ENST00000559728 MMADHCQ9H3L0 296 aaPredicted RBP8.09□□□□□ -1.11
HMG20A-209ENST00000559728 CALHM2Q9HA72 323 aa8.09□□□□□ -1.11
HMG20A-209ENST00000559728 TMEM27Q9HBJ8 222 aa8.09□□□□□ -1.11
HMG20A-209ENST00000559728 IL1RAPQ9NPH3 570 aa8.09□□□□□ -1.11
HMG20A-209ENST00000559728 MEPEQ9NQ76 525 aaPredicted RBP8.09□□□□□ -1.11
HMG20A-209ENST00000559728 ALKBH4Q9NXW9 302 aa8.09□□□□□ -1.11
HMG20A-209ENST00000559728 RHCGQ9UBD6 479 aa8.09□□□□□ -1.11
HMG20A-209ENST00000559728 SLC13A4Q9UKG4 626 aa8.09□□□□□ -1.11
HMG20A-209ENST00000559728 SLC7A7Q9UM01 511 aa8.09□□□□□ -1.11
HMG20A-209ENST00000559728 FLNCQ14315 2725 aa8.09□□□□□ -1.11
HMG20A-209ENST00000559728 HELZ2Q9BYK8 2649 aaKnown RBP8.08□□□□□ -1.12
HMG20A-209ENST00000559728 A0A0G2JNJ9 132 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 LRRN3E7EW58 273 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 H0Y3Z8 333 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 CCL21O00585 134 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 LDLRP01130 860 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 BGLAPP02818 100 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 MT-ND1P03886 318 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 THRBP10828 461 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 PNMTP11086 282 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 SNRPBP14678 240 aaKnown RBP8.08□□□□□ -1.12
HMG20A-209ENST00000559728 CXCR1P25024 350 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 FKBP2P26885 142 aaKnown RBP8.08□□□□□ -1.12
HMG20A-209ENST00000559728 PTGER4P35408 488 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 GCKP35557 465 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 TIMP3P35625 211 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 EIF1AXP47813 144 aaKnown RBP8.08□□□□□ -1.12
HMG20A-209ENST00000559728 LIMS1P48059 325 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 DIO1P49895 249 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 ERFP50548 548 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 AGFG1P52594 562 aaKnown RBP8.08□□□□□ -1.12
HMG20A-209ENST00000559728 UGT2B15P54855 530 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 CARD18P57730 90 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 RAC3P60763 192 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 FOXF2Q12947 444 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 PON3Q15166 354 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 MTX3Q5HYI7 312 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 C1orf140Q5VVS0 124 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 NHLRC1Q6VVB1 395 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 B3GNT6Q6ZMB0 384 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 LIX1LQ8IVB5 337 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 PAPD5Q8NDF8 572 aaKnown RBP8.08□□□□□ -1.12
HMG20A-209ENST00000559728 CANT1Q8WVQ1 401 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 ROBO4Q8WZ75 1007 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 OR5B2Q96R09 309 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 TMEM43Q9BTV4 400 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 RNF122Q9H9V4 155 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 NMNAT1Q9HAN9 279 aaPredicted RBP8.08□□□□□ -1.12
HMG20A-209ENST00000559728 SERINC1Q9NRX5 453 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 C20orf141Q9NUB4 165 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 VNN3Q9NY84 501 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 SEC14L4Q9UDX3 406 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 Q9UFV3 132 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 TRAPPC4Q9Y296 219 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 HDGFL3Q9Y3E1 203 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 ZNF175Q9Y473 711 aa8.08□□□□□ -1.12
HMG20A-209ENST00000559728 USP9XQ93008 2570 aaPredicted RBP8.08□□□□□ -1.12
HMG20A-209ENST00000559728 A0A087WUU8 490 aa8.07□□□□□ -1.12
HMG20A-209ENST00000559728 IGHV3-15A0A0B4J1V0 119 aa8.07□□□□□ -1.12
HMG20A-209ENST00000559728 A0A1W2PRQ8 180 aa8.07□□□□□ -1.12
HMG20A-209ENST00000559728 ELOA3DA6NLF2 546 aaPredicted RBP8.07□□□□□ -1.12
HMG20A-209ENST00000559728 GJE1A6NN92 205 aa8.07□□□□□ -1.12
HMG20A-209ENST00000559728 ZNF716A6NP11 495 aa8.07□□□□□ -1.12
HMG20A-209ENST00000559728 PIP5K1CO60331 668 aa8.07□□□□□ -1.12
HMG20A-209ENST00000559728 GMNNO75496 209 aa8.07□□□□□ -1.12
HMG20A-209ENST00000559728 TNFSF13O75888 250 aa8.07□□□□□ -1.12
HMG20A-209ENST00000559728 RCBTB2O95199 551 aa8.07□□□□□ -1.12
HMG20A-209ENST00000559728 PMS2P2O95744 297 aa8.07□□□□□ -1.12
HMG20A-209ENST00000559728 HOXD4P09016 255 aaPredicted RBP8.07□□□□□ -1.12
HMG20A-209ENST00000559728 RHCEP18577 417 aa8.07□□□□□ -1.12
HMG20A-209ENST00000559728 NTF4P34130 210 aa8.07□□□□□ -1.12
HMG20A-209ENST00000559728 TAS2R41P59536 307 aa8.07□□□□□ -1.12
HMG20A-209ENST00000559728 PMPCAQ10713 525 aa8.07□□□□□ -1.12
HMG20A-209ENST00000559728 FHL1Q13642 323 aa8.07□□□□□ -1.12
HMG20A-209ENST00000559728 DGCR6Q14129 220 aa8.07□□□□□ -1.12
HMG20A-209ENST00000559728 FLOT2Q14254 428 aa8.07□□□□□ -1.12
HMG20A-209ENST00000559728 SEC23BQ15437 767 aa8.07□□□□□ -1.12
HMG20A-209ENST00000559728 ELOA3BQ3SY89 546 aa8.07□□□□□ -1.12
HMG20A-209ENST00000559728 RIPPLY2Q5TAB7 128 aa8.07□□□□□ -1.12
HMG20A-209ENST00000559728 ABLIM2Q6H8Q1 611 aa8.07□□□□□ -1.12
HMG20A-209ENST00000559728 TBPL2Q6SJ96 375 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms