RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 TMEM176BQ3YBM2 270 aaPredicted RBP9.85□□□□□ -0.83
CARMIL3-202ENST00000559694 ANKRD34AQ69YU3 496 aa9.85□□□□□ -0.83
CARMIL3-202ENST00000559694 CNIH2Q6PI25 160 aa9.85□□□□□ -0.83
CARMIL3-202ENST00000559694 GDPD3Q7L5L3 318 aa9.85□□□□□ -0.83
CARMIL3-202ENST00000559694 SLC25A45Q8N413 288 aa9.85□□□□□ -0.83
CARMIL3-202ENST00000559694 COQ8BQ96D53 544 aa9.85□□□□□ -0.83
CARMIL3-202ENST00000559694 HIST1H2AAQ96QV6 131 aa9.85□□□□□ -0.83
CARMIL3-202ENST00000559694 ORAI3Q9BRQ5 295 aa9.85□□□□□ -0.83
CARMIL3-202ENST00000559694 AKIP1Q9NQ31 210 aa9.85□□□□□ -0.83
CARMIL3-202ENST00000559694 PCOLCE2Q9UKZ9 415 aa9.85□□□□□ -0.83
CARMIL3-202ENST00000559694 MRPS2Q9Y399 296 aaKnown RBP9.85□□□□□ -0.83
CARMIL3-202ENST00000559694 PCDHGB2Q9Y5G2 931 aa9.85□□□□□ -0.83
CARMIL3-202ENST00000559694 PCDH17O14917 1159 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 SPARCP09486 303 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 POU3F2P20265 443 aaPredicted RBP9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 TRHRP34981 398 aaPredicted RBP9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 TGFBR1P36897 503 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 PSMA6P60900 246 aaKnown RBP9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 MAP4K2Q12851 820 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 ODF4Q2M2E3 257 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 ENTPD8Q5MY95 495 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 SLC25A25Q6KCM7 469 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 PWWP2BQ6NUJ5 590 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 VN1R4Q7Z5H5 301 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 GPR137CQ8N3F9 429 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 AMER3Q8N944 861 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 OR52E2Q8NGJ4 325 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 OR2T35Q8NGX2 323 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 TRIM36Q9NQ86 728 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 PILRBQ9UKJ0 227 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 EXOSC1Q9Y3B2 195 aaKnown RBP9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 FKBP7Q9Y680 259 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 MYO16Q9Y6X6 1858 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 CD8B2A6NJW9 211 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 ANKRD28O15084 1053 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 CD8BP10966 210 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 RPS5P46782 204 aaKnown RBP9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 C17orf67Q0P5P2 114 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 OR1Q1Q15612 314 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 CCDC58Q4VC31 144 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 C4orf46Q504U0 113 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 FTMTQ8N4E7 242 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 CLDN23Q96B33 292 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 ZNF775Q96BV0 537 aaPredicted RBP9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 SAV1Q9H4B6 383 aaPredicted RBP9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 DOCK8Q8NF50 2099 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 CUL9Q8IWT3 2517 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 FXYD1O00168 92 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 PTHP01270 115 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 PRKCAP17252 672 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 DPP4P27487 766 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 NAA10P41227 235 aaPredicted RBP9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 ZNF84P51523 738 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 SLC35A2P78381 396 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 SNTB2Q13425 540 aaKnown RBP9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 RPL13AP3Q6NVV1 102 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 ZNF793Q6ZN11 406 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 SLC46A3Q7Z3Q1 461 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 CYB561A3Q8NBI2 242 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 OR51L1Q8NGJ5 315 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 C16orf52Q8NHV5 167 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 NT5CQ8TCD5 201 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 DYNC2LI1Q8TCX1 351 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 PMM1Q92871 262 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 LOXL4Q96JB6 756 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 SAMD8Q96LT4 415 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 IP6K3Q96PC2 410 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 FYTTD1Q96QD9 318 aaKnown RBP9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 OCIAD1Q9NX40 245 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 NPAP1Q9NZP6 1156 aa9.84□□□□□ -0.83
CARMIL3-202ENST00000559694 ECDO95905 644 aaPredicted RBP9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 ADAP00813 363 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 SERPINA3P01011 423 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 ABOP16442 354 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 UBE2IP63279 158 aaKnown RBP9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 ZMYND11Q15326 602 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 MICAQ29983 383 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 FCRL6Q6DN72 434 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 WBP2NLQ6ICG8 309 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 MARCH3Q86UD3 253 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 LAX1Q8IWV1 398 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 DNAJC22Q8N4W6 341 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 SLC35B4Q969S0 331 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 GAL3ST1Q99999 423 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 PSD2Q9BQI7 771 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 ATPIF1Q9UII2 106 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 LAMP5Q9UJQ1 280 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 PCDHGB1Q9Y5G3 927 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 PCYT1BQ9Y5K3 369 aaPredicted RBP9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 VSTM5A8MXK1 200 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 DDAH2O95865 285 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 F8A1P23610 371 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 UGT2B10P36537 528 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 MAN2A2P49641 1150 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 SOWAHCQ53LP3 525 aaPredicted RBP9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 UEVLDQ8IX04 471 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 ZADH2Q8N4Q0 377 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 TMEM105Q8N8V8 129 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 ACOT11Q8WXI4 607 aaPredicted RBP9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 BPIFA2Q96DR5 249 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms