RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 GINS1Q14691 196 aa14.99□□□□□ -0.01
TPM1-219ENST00000559397 SLC6A19Q695T7 634 aa14.99□□□□□ -0.01
TPM1-219ENST00000559397 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.99□□□□□ -0.01
TPM1-219ENST00000559397 OR2M3Q8NG83 312 aa14.99□□□□□ -0.01
TPM1-219ENST00000559397 OR8D4Q8NGM9 314 aa14.99□□□□□ -0.01
TPM1-219ENST00000559397 OR1J4Q8NGS1 313 aa14.99□□□□□ -0.01
TPM1-219ENST00000559397 B4GALNT2Q8NHY0 566 aa14.99□□□□□ -0.01
TPM1-219ENST00000559397 WBP1Q96G27 269 aa14.99□□□□□ -0.01
TPM1-219ENST00000559397 SH3YL1Q96HL8 342 aaPredicted RBP14.99□□□□□ -0.01
TPM1-219ENST00000559397 GNRHR2Q96P88 292 aa14.99□□□□□ -0.01
TPM1-219ENST00000559397 PLA2G12AQ9BZM1 189 aa14.99□□□□□ -0.01
TPM1-219ENST00000559397 ZFP64Q9NPA5 681 aa14.99□□□□□ -0.01
TPM1-219ENST00000559397 MEPEQ9NQ76 525 aaPredicted RBP14.99□□□□□ -0.01
TPM1-219ENST00000559397 MED11Q9P086 117 aa14.99□□□□□ -0.01
TPM1-219ENST00000559397 FBXL2Q9UKC9 423 aa14.99□□□□□ -0.01
TPM1-219ENST00000559397 LHX6Q9UPM6 363 aa14.99□□□□□ -0.01
TPM1-219ENST00000559397 A0A087WUJ7 227 aa14.98□□□□□ -0.01
TPM1-219ENST00000559397 CDC42EP2O14613 210 aa14.98□□□□□ -0.01
TPM1-219ENST00000559397 HCRTR2O43614 444 aa14.98□□□□□ -0.01
TPM1-219ENST00000559397 MRPS14O60783 128 aaKnown RBP14.98□□□□□ -0.01
TPM1-219ENST00000559397 GLSO94925 669 aaPredicted RBP14.98□□□□□ -0.01
TPM1-219ENST00000559397 SFTPCP11686 197 aa14.98□□□□□ -0.01
TPM1-219ENST00000559397 JUNBP17275 347 aaPredicted RBP14.98□□□□□ -0.01
TPM1-219ENST00000559397 MAKP20794 623 aa14.98□□□□□ -0.01
TPM1-219ENST00000559397 MSX1P28360 303 aa14.98□□□□□ -0.01
TPM1-219ENST00000559397 SLC6A8P48029 635 aa14.98□□□□□ -0.01
TPM1-219ENST00000559397 MASP1P48740 699 aa14.98□□□□□ -0.01
TPM1-219ENST00000559397 P2RX1P51575 399 aa14.98□□□□□ -0.01
TPM1-219ENST00000559397 COPZ1P61923 177 aa14.98□□□□□ -0.01
TPM1-219ENST00000559397 EFNB1P98172 346 aa14.98□□□□□ -0.01
TPM1-219ENST00000559397 HYAL4Q2M3T9 481 aa14.98□□□□□ -0.01
TPM1-219ENST00000559397 TMEM201Q5SNT2 666 aa14.98□□□□□ -0.01
TPM1-219ENST00000559397 WBP2NLQ6ICG8 309 aa14.98□□□□□ -0.01
TPM1-219ENST00000559397 RPUSD3Q6P087 351 aaKnown RBP14.98□□□□□ -0.01
TPM1-219ENST00000559397 ZNF620Q6ZNG0 422 aa14.98□□□□□ -0.01
TPM1-219ENST00000559397 SPARTQ8N0X7 666 aa14.98□□□□□ -0.01
TPM1-219ENST00000559397 CADM2Q8N3J6 435 aa14.98□□□□□ -0.01
TPM1-219ENST00000559397 ZFP62Q8NB50 900 aaPredicted RBP14.98□□□□□ -0.01
TPM1-219ENST00000559397 PFN4Q8NHR9 129 aa14.98□□□□□ -0.01
TPM1-219ENST00000559397 SLC39A7Q92504 469 aa14.98□□□□□ -0.01
TPM1-219ENST00000559397 PNPLA2Q96AD5 504 aa14.98□□□□□ -0.01
TPM1-219ENST00000559397 C3orf49Q96BT1 292 aa14.98□□□□□ -0.01
TPM1-219ENST00000559397 JSRP1Q96MG2 331 aaPredicted RBP14.98□□□□□ -0.01
TPM1-219ENST00000559397 EGLN3Q9H6Z9 239 aa14.98□□□□□ -0.01
TPM1-219ENST00000559397 HHATLQ9HCP6 504 aa14.98□□□□□ -0.01
TPM1-219ENST00000559397 C20orf141Q9NUB4 165 aa14.98□□□□□ -0.01
TPM1-219ENST00000559397 RPS6KB2Q9UBS0 482 aa14.98□□□□□ -0.01
TPM1-219ENST00000559397 BOKQ9UMX3 212 aaPredicted RBP14.98□□□□□ -0.01
TPM1-219ENST00000559397 NCKAP5O14513 1909 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 M0R129 80 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 IFI30P13284 250 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 SMSP52788 366 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 ACSM5Q6NUN0 579 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 PTCHD4Q6ZW05 846 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 P3H2Q8IVL5 708 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 Q8NA96 180 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 OR5W2Q8NH69 310 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 TEX47Q8TBZ9 253 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 IPCEF1Q8WWN9 437 aaPredicted RBP14.97□□□□□ -0.01
TPM1-219ENST00000559397 OSTF1Q92882 214 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 SIGLEC11Q96RL6 698 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 UBQLN3Q9H347 655 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 FKBP14Q9NWM8 211 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 PSORS1C1Q9UIG5 152 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 PCDHGB1Q9Y5G3 927 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 CDH10Q9Y6N8 788 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 SH3D21A4FU49 640 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 UNC119BA6NIH7 251 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 PTGES3LE9PB15 166 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 GMFGO60234 142 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 FAM20BO75063 409 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 RFPL3SP0C7P2 107 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 SUMO3P55854 103 aaPredicted RBP14.97□□□□□ -0.01
TPM1-219ENST00000559397 PMP22Q01453 160 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 LY6DQ14210 128 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 SLC25A30Q5SVS4 291 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 SLC27A4Q6P1M0 643 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 KCTD8Q6ZWB6 473 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 IQCF1Q8N6M8 205 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 OR8J1Q8NGP2 316 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 RNF217Q8TC41 542 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 ZNF524Q96C55 264 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 BPIFA2Q96DR5 249 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 POLDIP3Q9BY77 421 aaKnown RBP14.97□□□□□ -0.01
TPM1-219ENST00000559397 TTTY12Q9BZ98 90 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 RBM38Q9H0Z9 239 aaKnown RBP14.97□□□□□ -0.01
TPM1-219ENST00000559397 SELENONQ9NZV5 590 aa14.97□□□□□ -0.01
TPM1-219ENST00000559397 ANKUB1A6NFN9 424 aa14.96□□□□□ -0.01
TPM1-219ENST00000559397 CBR3O75828 277 aa14.96□□□□□ -0.01
TPM1-219ENST00000559397 PTNP21246 168 aa14.96□□□□□ -0.01
TPM1-219ENST00000559397 MST1P26927 711 aa14.96□□□□□ -0.01
TPM1-219ENST00000559397 RFC3P40938 356 aa14.96□□□□□ -0.01
TPM1-219ENST00000559397 PIGFQ07326 219 aa14.96□□□□□ -0.01
TPM1-219ENST00000559397 CBFBQ13951 182 aa14.96□□□□□ -0.01
TPM1-219ENST00000559397 XAF1Q6GPH4 301 aa14.96□□□□□ -0.01
TPM1-219ENST00000559397 CASP12Q6UXS9 341 aa14.96□□□□□ -0.01
TPM1-219ENST00000559397 ATG4DQ86TL0 474 aaPredicted RBP14.96□□□□□ -0.01
TPM1-219ENST00000559397 CDK20Q8IZL9 346 aa14.96□□□□□ -0.01
TPM1-219ENST00000559397 FAM26EQ8N5C1 309 aa14.96□□□□□ -0.01
TPM1-219ENST00000559397 TMCO5AQ8N6Q1 288 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms