RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 MAN2C1Q9NTJ4 1040 aa19.41■□□□□ 0.7
SNX1-206ENST00000559389 TRAPPC4Q9Y296 219 aa19.41■□□□□ 0.7
SNX1-206ENST00000559389 LIPT2A6NK58 231 aa19.4■□□□□ 0.7
SNX1-206ENST00000559389 SMAD9O15198 467 aaKnown RBP19.4■□□□□ 0.7
SNX1-206ENST00000559389 FZD7O75084 574 aa19.4■□□□□ 0.7
SNX1-206ENST00000559389 FABP3P05413 133 aa19.4■□□□□ 0.7
SNX1-206ENST00000559389 ITGA2P17301 1181 aa19.4■□□□□ 0.7
SNX1-206ENST00000559389 RHCEP18577 417 aa19.4■□□□□ 0.7
SNX1-206ENST00000559389 PTNP21246 168 aa19.4■□□□□ 0.7
SNX1-206ENST00000559389 CEACAM8P31997 349 aaPredicted RBP19.4■□□□□ 0.7
SNX1-206ENST00000559389 IFNA8P32881 189 aa19.4■□□□□ 0.7
SNX1-206ENST00000559389 RBM34P42696 430 aaKnown RBP19.4■□□□□ 0.7
SNX1-206ENST00000559389 MAGEA2P43356 314 aa19.4■□□□□ 0.7
SNX1-206ENST00000559389 PMPCAQ10713 525 aa19.4■□□□□ 0.7
SNX1-206ENST00000559389 P4HA3Q7Z4N8 544 aa19.4■□□□□ 0.7
SNX1-206ENST00000559389 P3H2Q8IVL5 708 aa19.4■□□□□ 0.7
SNX1-206ENST00000559389 NKAIN4Q8IVV8 208 aa19.4■□□□□ 0.7
SNX1-206ENST00000559389 ADGRG5Q8IZF4 528 aa19.4■□□□□ 0.7
SNX1-206ENST00000559389 PIK3C3Q8NEB9 887 aa19.4■□□□□ 0.7
SNX1-206ENST00000559389 RNF128Q8TEB7 428 aa19.4■□□□□ 0.7
SNX1-206ENST00000559389 KTI12Q96EK9 354 aaPredicted RBP19.4■□□□□ 0.7
SNX1-206ENST00000559389 SEPHS2Q99611 448 aa19.4■□□□□ 0.7
SNX1-206ENST00000559389 RNF122Q9H9V4 155 aa19.4■□□□□ 0.7
SNX1-206ENST00000559389 RHCGQ9UBD6 479 aa19.4■□□□□ 0.7
SNX1-206ENST00000559389 PRRC2CQ9Y520 2896 aaKnown RBP19.4■□□□□ 0.7
SNX1-206ENST00000559389 TRAV36DV7A0A075B6V5 113 aa19.39■□□□□ 0.69
SNX1-206ENST00000559389 KLK2P20151 261 aa19.39■□□□□ 0.69
SNX1-206ENST00000559389 FUT4P22083 530 aa19.39■□□□□ 0.69
SNX1-206ENST00000559389 OR2B6P58173 313 aa19.39■□□□□ 0.69
SNX1-206ENST00000559389 PPP4R4Q6NUP7 873 aa19.39■□□□□ 0.69
SNX1-206ENST00000559389 TTC33Q6PID6 262 aaPredicted RBP19.39■□□□□ 0.69
SNX1-206ENST00000559389 ZDHHC21Q8IVQ6 265 aa19.39■□□□□ 0.69
SNX1-206ENST00000559389 NAXEQ8NCW5 288 aa19.39■□□□□ 0.69
SNX1-206ENST00000559389 OR6S1Q8NH40 331 aa19.39■□□□□ 0.69
SNX1-206ENST00000559389 RND1Q92730 232 aa19.39■□□□□ 0.69
SNX1-206ENST00000559389 ZHX1-C8orf76Q96EF9 292 aa19.39■□□□□ 0.69
SNX1-206ENST00000559389 DHRS1Q96LJ7 313 aa19.39■□□□□ 0.69
SNX1-206ENST00000559389 ZFP3Q96NJ6 502 aa19.39■□□□□ 0.69
SNX1-206ENST00000559389 EPYCQ99645 322 aa19.39■□□□□ 0.69
SNX1-206ENST00000559389 PIP5K1AQ99755 562 aa19.39■□□□□ 0.69
SNX1-206ENST00000559389 FNDC11Q9BVV2 318 aa19.39■□□□□ 0.69
SNX1-206ENST00000559389 SLC19A3Q9BZV2 496 aa19.39■□□□□ 0.69
SNX1-206ENST00000559389 FAM32AQ9Y421 112 aaKnown RBP19.39■□□□□ 0.69
SNX1-206ENST00000559389 NCOA6Q14686 2063 aaPredicted RBP19.39■□□□□ 0.69
SNX1-206ENST00000559389 A0A0G2JNJ9 132 aa19.38■□□□□ 0.69
SNX1-206ENST00000559389 TCRBV3S1A0A5B6 114 aa19.38■□□□□ 0.69
SNX1-206ENST00000559389 FTCDNL1E5RQL4 147 aa19.38■□□□□ 0.69
SNX1-206ENST00000559389 AGFG2O95081 481 aa19.38■□□□□ 0.69
SNX1-206ENST00000559389 RCBTB2O95199 551 aa19.38■□□□□ 0.69
SNX1-206ENST00000559389 LDLRP01130 860 aa19.38■□□□□ 0.69
SNX1-206ENST00000559389 GPIP06744 558 aa19.38■□□□□ 0.69
SNX1-206ENST00000559389 FPR1P21462 350 aa19.38■□□□□ 0.69
SNX1-206ENST00000559389 ENPP1P22413 925 aa19.38■□□□□ 0.69
SNX1-206ENST00000559389 RPS5P46782 204 aaKnown RBP19.38■□□□□ 0.69
SNX1-206ENST00000559389 AGFG1P52594 562 aaKnown RBP19.38■□□□□ 0.69
SNX1-206ENST00000559389 SLC35A1P78382 337 aa19.38■□□□□ 0.69
SNX1-206ENST00000559389 TRAM2Q15035 370 aa19.38■□□□□ 0.69
SNX1-206ENST00000559389 OR7A5Q15622 319 aa19.38■□□□□ 0.69
SNX1-206ENST00000559389 FAM98BQ52LJ0 330 aaKnown RBP19.38■□□□□ 0.69
SNX1-206ENST00000559389 HIVEP3Q5T1R4 2406 aa19.38■□□□□ 0.69
SNX1-206ENST00000559389 FAM69AQ5T7M9 428 aa19.38■□□□□ 0.69
SNX1-206ENST00000559389 ABLIM2Q6H8Q1 611 aa19.38■□□□□ 0.69
SNX1-206ENST00000559389 PIWIL3Q7Z3Z3 882 aaKnown RBP19.38■□□□□ 0.69
SNX1-206ENST00000559389 FAM26EQ8N5C1 309 aa19.38■□□□□ 0.69
SNX1-206ENST00000559389 MFSD8Q8NHS3 518 aa19.38■□□□□ 0.69
SNX1-206ENST00000559389 TMEM255BQ8WV15 326 aa19.38■□□□□ 0.69
SNX1-206ENST00000559389 ROBO4Q8WZ75 1007 aa19.38■□□□□ 0.69
SNX1-206ENST00000559389 TAPBPLQ9BX59 468 aa19.38■□□□□ 0.69
SNX1-206ENST00000559389 PRRG4Q9BZD6 226 aa19.38■□□□□ 0.69
SNX1-206ENST00000559389 ANKRD19PQ9H560 264 aa19.38■□□□□ 0.69
SNX1-206ENST00000559389 NMNAT1Q9HAN9 279 aaPredicted RBP19.38■□□□□ 0.69
SNX1-206ENST00000559389 Q9UFV3 132 aa19.38■□□□□ 0.69
SNX1-206ENST00000559389 MPDZO75970 2070 aa19.37■□□□□ 0.69
SNX1-206ENST00000559389 IGHV3-15A0A0B4J1V0 119 aa19.37■□□□□ 0.69
SNX1-206ENST00000559389 DHRS12A0PJE2 317 aa19.37■□□□□ 0.69
SNX1-206ENST00000559389 ZG16O60844 167 aa19.37■□□□□ 0.69
SNX1-206ENST00000559389 DIRAS1O95057 198 aa19.37■□□□□ 0.69
SNX1-206ENST00000559389 IL2RAP01589 272 aa19.37■□□□□ 0.69
SNX1-206ENST00000559389 H1F0P07305 194 aaKnown RBP19.37■□□□□ 0.69
SNX1-206ENST00000559389 UGT2B15P54855 530 aa19.37■□□□□ 0.69
SNX1-206ENST00000559389 H3F3AP84243 136 aa19.37■□□□□ 0.69
SNX1-206ENST00000559389 CHRNB3Q05901 458 aa19.37■□□□□ 0.69
SNX1-206ENST00000559389 C1orf146Q5VVC0 180 aa19.37■□□□□ 0.69
SNX1-206ENST00000559389 OR2A2Q6IF42 318 aa19.37■□□□□ 0.69
SNX1-206ENST00000559389 FCRLAQ7L513 359 aa19.37■□□□□ 0.69
SNX1-206ENST00000559389 SPATA24Q86W54 205 aa19.37■□□□□ 0.69
SNX1-206ENST00000559389 GCNT2Q8N0V5 402 aa19.37■□□□□ 0.69
SNX1-206ENST00000559389 ABHD3Q8WU67 409 aa19.37■□□□□ 0.69
SNX1-206ENST00000559389 TMEM239Q8WW34 195 aa19.37■□□□□ 0.69
SNX1-206ENST00000559389 TAAR8Q969N4 342 aa19.37■□□□□ 0.69
SNX1-206ENST00000559389 RNF6Q9Y252 685 aa19.37■□□□□ 0.69
SNX1-206ENST00000559389 DOCK7Q96N67 2140 aa19.36■□□□□ 0.69
SNX1-206ENST00000559389 A0A1W2PRQ8 180 aa19.36■□□□□ 0.69
SNX1-206ENST00000559389 HSPB2A8KAH6 182 aa19.36■□□□□ 0.69
SNX1-206ENST00000559389 ZNF814B7Z6K7 855 aa19.36■□□□□ 0.69
SNX1-206ENST00000559389 KPNA4O00629 521 aaPredicted RBP19.36■□□□□ 0.69
SNX1-206ENST00000559389 OR2T1O43869 369 aa19.36■□□□□ 0.69
SNX1-206ENST00000559389 EIF1BO60739 113 aaKnown RBP19.36■□□□□ 0.69
SNX1-206ENST00000559389 CIB2O75838 187 aa19.36■□□□□ 0.69
SNX1-206ENST00000559389 BGLAPP02818 100 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms