RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 SMYD1Q8NB12 490 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 SLC25A43Q8WUT9 341 aaPredicted RBP10.66□□□□□ -0.7
TPM1-216ENST00000558910 S100PBPQ96BU1 408 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 SLC25A36Q96CQ1 311 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 MDFIQ99750 246 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 CPPED1Q9BRF8 314 aaPredicted RBP10.66□□□□□ -0.7
TPM1-216ENST00000558910 SPATA9Q9BWV2 254 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 FAM107BQ9H098 131 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 ST6GALNAC2Q9UJ37 374 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 CHST2Q9Y4C5 530 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 ITPR3Q14573 2671 aa10.66□□□□□ -0.7
TPM1-216ENST00000558910 DSPPQ9NZW4 1301 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 ELOA3CA0A087WX78 387 aaPredicted RBP10.65□□□□□ -0.7
TPM1-216ENST00000558910 A0A1W2PR80 420 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 ELOA3DA6NLF2 546 aaPredicted RBP10.65□□□□□ -0.7
TPM1-216ENST00000558910 ETV2O00321 342 aaPredicted RBP10.65□□□□□ -0.7
TPM1-216ENST00000558910 CYTIPO60759 359 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 DNAJA2O60884 412 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 AKR7A3O95154 331 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 THBDP07204 575 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 GUSBP08236 651 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 SLC6A2P23975 617 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 ADSLP30566 484 aaPredicted RBP10.65□□□□□ -0.7
TPM1-216ENST00000558910 ACAA2P42765 397 aaKnown RBP10.65□□□□□ -0.7
TPM1-216ENST00000558910 HTR3AP46098 478 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 MRPL19P49406 292 aaKnown RBP10.65□□□□□ -0.7
TPM1-216ENST00000558910 IL1RL1Q01638 556 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 ELOA3BQ3SY89 546 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 RUNDC3AQ59EK9 446 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 WBP2NLQ6ICG8 309 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 REEP3Q6NUK4 255 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 CASP12Q6UXS9 341 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 DLEU7Q6UYE1 221 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 GALNT5Q7Z7M9 940 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 MTDHQ86UE4 582 aaKnown RBP10.65□□□□□ -0.7
TPM1-216ENST00000558910 COMTD1Q86VU5 262 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 ZNF440Q8IYI8 595 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 SLC43A2Q8N370 569 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 ELOA3Q8NG57 546 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 CGREF1Q99674 301 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 ZNF385DQ9H6B1 395 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 ARMC7Q9H6L4 198 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 THUMPD1Q9NXG2 353 aaKnown RBP10.65□□□□□ -0.7
TPM1-216ENST00000558910 ARMCX1Q9P291 453 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 TMEM181Q9P2C4 612 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 ING1Q9UK53 422 aaPredicted RBP10.65□□□□□ -0.7
TPM1-216ENST00000558910 SLC13A4Q9UKG4 626 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 NOSIPQ9Y314 301 aaKnown RBP10.65□□□□□ -0.7
TPM1-216ENST00000558910 IFT52Q9Y366 437 aa10.65□□□□□ -0.7
TPM1-216ENST00000558910 CCT8L1PA6NM43 557 aa10.64□□□□□ -0.71
TPM1-216ENST00000558910 DEFB108AA8MXU0 73 aa10.64□□□□□ -0.71
TPM1-216ENST00000558910 CLOCKO15516 846 aa10.64□□□□□ -0.71
TPM1-216ENST00000558910 PLAUP00749 431 aa10.64□□□□□ -0.71
TPM1-216ENST00000558910 IGHA1P01876 353 aa10.64□□□□□ -0.71
TPM1-216ENST00000558910 CDH2P19022 906 aaPredicted RBP10.64□□□□□ -0.71
TPM1-216ENST00000558910 PPIBP23284 216 aaKnown RBP10.64□□□□□ -0.71
TPM1-216ENST00000558910 IDUAP35475 653 aa10.64□□□□□ -0.71
TPM1-216ENST00000558910 OTUD3Q5T2D3 398 aaPredicted RBP10.64□□□□□ -0.71
TPM1-216ENST00000558910 ATG4DQ86TL0 474 aaPredicted RBP10.64□□□□□ -0.71
TPM1-216ENST00000558910 SNX32Q86XE0 403 aa10.64□□□□□ -0.71
TPM1-216ENST00000558910 KRT73Q86Y46 540 aa10.64□□□□□ -0.71
TPM1-216ENST00000558910 KDM8Q8N371 416 aa10.64□□□□□ -0.71
TPM1-216ENST00000558910 POU5F2Q8N7G0 328 aa10.64□□□□□ -0.71
TPM1-216ENST00000558910 TMEM99Q8N816 258 aa10.64□□□□□ -0.71
TPM1-216ENST00000558910 OR10A6Q8NH74 314 aa10.64□□□□□ -0.71
TPM1-216ENST00000558910 VANGL1Q8TAA9 524 aaPredicted RBP10.64□□□□□ -0.71
TPM1-216ENST00000558910 KISS1RQ969F8 398 aaPredicted RBP10.64□□□□□ -0.71
TPM1-216ENST00000558910 WFDC6Q9BQY6 131 aa10.64□□□□□ -0.71
TPM1-216ENST00000558910 NAA11Q9BSU3 229 aaPredicted RBP10.64□□□□□ -0.71
TPM1-216ENST00000558910 TAPBPLQ9BX59 468 aa10.64□□□□□ -0.71
TPM1-216ENST00000558910 RSPO3Q9BXY4 272 aaPredicted RBP10.64□□□□□ -0.71
TPM1-216ENST00000558910 FANCFQ9NPI8 374 aa10.64□□□□□ -0.71
TPM1-216ENST00000558910 USP22Q9UPT9 525 aa10.64□□□□□ -0.71
TPM1-216ENST00000558910 ANGPT4Q9Y264 503 aa10.64□□□□□ -0.71
TPM1-216ENST00000558910 HDGFL3Q9Y3E1 203 aa10.64□□□□□ -0.71
TPM1-216ENST00000558910 PRRC2AP48634 2157 aaKnown RBP10.63□□□□□ -0.71
TPM1-216ENST00000558910 PRR14LQ5THK1 2151 aa10.63□□□□□ -0.71
TPM1-216ENST00000558910 TRBV5-3A0A0A0MS03 114 aa10.63□□□□□ -0.71
TPM1-216ENST00000558910 FAM221AA4D161 298 aa10.63□□□□□ -0.71
TPM1-216ENST00000558910 M0R3H8 397 aa10.63□□□□□ -0.71
TPM1-216ENST00000558910 FBP2O00757 339 aa10.63□□□□□ -0.71
TPM1-216ENST00000558910 GCM2O75603 506 aaPredicted RBP10.63□□□□□ -0.71
TPM1-216ENST00000558910 RAD51DO75771 328 aa10.63□□□□□ -0.71
TPM1-216ENST00000558910 PMS2P2O95744 297 aa10.63□□□□□ -0.71
TPM1-216ENST00000558910 CRYGSP22914 178 aa10.63□□□□□ -0.71
TPM1-216ENST00000558910 MAGEA8P43361 318 aa10.63□□□□□ -0.71
TPM1-216ENST00000558910 RPS5P46782 204 aaKnown RBP10.63□□□□□ -0.71
TPM1-216ENST00000558910 OR3A2P47893 321 aa10.63□□□□□ -0.71
TPM1-216ENST00000558910 FOXG1P55316 489 aaPredicted RBP10.63□□□□□ -0.71
TPM1-216ENST00000558910 RGS8P57771 180 aaPredicted RBP10.63□□□□□ -0.71
TPM1-216ENST00000558910 NCALDP61601 193 aa10.63□□□□□ -0.71
TPM1-216ENST00000558910 SLC35A1P78382 337 aa10.63□□□□□ -0.71
TPM1-216ENST00000558910 DMTNQ08495 405 aa10.63□□□□□ -0.71
TPM1-216ENST00000558910 FAPQ12884 760 aa10.63□□□□□ -0.71
TPM1-216ENST00000558910 KLF10Q13118 480 aa10.63□□□□□ -0.71
TPM1-216ENST00000558910 ADRM1Q16186 407 aa10.63□□□□□ -0.71
TPM1-216ENST00000558910 RABL3Q5HYI8 236 aa10.63□□□□□ -0.71
TPM1-216ENST00000558910 RNF220Q5VTB9 566 aa10.63□□□□□ -0.71
TPM1-216ENST00000558910 REP15Q6BDI9 236 aa10.63□□□□□ -0.71
TPM1-216ENST00000558910 BHLHA15Q7RTS1 189 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms