RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 NELFAQ9H3P2 528 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 PCDHGA9Q9Y5G4 932 aaKnown RBP3.45□□□□□ -1.86
ATXN3-248ENST00000558190 CTRB1P17538 263 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 MVDP53602 400 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 CTRB2Q6GPI1 263 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 GATSQ8NAP1 163 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF480Q8WV37 535 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 ABHD1Q96SE0 405 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 ENKD1Q9H0I2 346 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 MYOTQ9UBF9 498 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 TMEM269A0A1B0GVZ9 245 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 NFKBIEO00221 500 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 PFKMP08237 780 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 CD37P11049 281 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 EIPR1Q53HC9 387 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 KCTD18Q6PI47 426 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-248ENST00000558190 DOK1Q99704 481 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 BACE2Q9Y5Z0 518 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 HYKKA2RU49 373 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 TMEM235A6NFC5 223 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 PNLIPRP1P54315 467 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 OR1Q1Q15612 314 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 MCEMP1Q8IX19 187 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 NUP43Q8NFH3 380 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 OR6N1Q8NGY5 312 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 PHOSPHO1Q8TCT1 267 aa3.45□□□□□ -1.86
ATXN3-248ENST00000558190 DNAJB6O75190 326 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 ACAA2P42765 397 aaKnown RBP3.44□□□□□ -1.86
ATXN3-248ENST00000558190 TLE3Q04726 772 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 EXOSC2Q13868 293 aaKnown RBP3.44□□□□□ -1.86
ATXN3-248ENST00000558190 MLF2Q15773 248 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-248ENST00000558190 ANGPTL5Q86XS5 388 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 NTAN1Q96AB6 310 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 SLC35A4Q96G79 324 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 NXF5Q9H1B4 397 aaKnown RBP3.44□□□□□ -1.86
ATXN3-248ENST00000558190 ANKRD19PQ9H560 264 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 SNRPGP15A8MWD9 76 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 TACR3P29371 465 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF91Q05481 1191 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 COX20Q5RI15 118 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 NIPAL3Q6P499 406 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 OR52B6Q8NGF0 335 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 KLRG1Q96E93 195 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 TMEM14AQ9Y6G1 99 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 PRSS21Q9Y6M0 314 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 SYT7O43581 403 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 BCHEP06276 602 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 GSTP1P09211 210 aaKnown RBP3.44□□□□□ -1.86
ATXN3-248ENST00000558190 SLC1A3P43003 542 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 MARCH8Q5T0T0 291 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 CERS5Q8N5B7 392 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 WFIKKN2Q8TEU8 576 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 C4orf36Q96KX1 117 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 TAF9BQ9HBM6 251 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 DPM1O60762 260 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 EDN3P14138 238 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 MLIPQ5VWP3 458 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 GRIN2BQ13224 1484 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 PYCARD-AS1I3L0S3 204 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 J3QR89 54 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 AKR7A3O95154 331 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 RRASP10301 218 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 HOXA10P31260 410 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-248ENST00000558190 CD52P31358 61 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 SYT14P1Q58G82 188 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 ARL14EPQ8N8R7 260 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-248ENST00000558190 OR9K2Q8NGE7 335 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 PDLIM5Q96HC4 596 aaKnown RBP3.44□□□□□ -1.86
ATXN3-248ENST00000558190 C1QTNF6Q9BXI9 259 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 SLIRPQ9GZT3 109 aaKnown RBP3.44□□□□□ -1.86
ATXN3-248ENST00000558190 PRDM7Q9NQW5 492 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 PRSS50Q9UI38 385 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 NXT1Q9UKK6 140 aaKnown RBP3.44□□□□□ -1.86
ATXN3-248ENST00000558190 POMT2Q9UKY4 750 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 CCDC141Q6ZP82 1450 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 TAPBPO15533 448 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 PIM1P11309 404 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-248ENST00000558190 GAS6Q14393 721 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 DECR1Q16698 335 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 THRSPQ92748 146 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 ELOVL2Q9NXB9 296 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 FAM155AB1AL88 458 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-248ENST00000558190 S100A7P31151 101 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 HNF4GQ14541 408 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 SLC24A5Q71RS6 500 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 C11orf42Q8N5U0 333 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 hCG_1809904A0A1W2PP81 198 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 A0A1W2PR64 198 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 A0A1W2PRV1 198 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 GABARAPO95166 117 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 MTCP1P56278 107 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 DLX2Q07687 328 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-248ENST00000558190 THEM4Q5T1C6 240 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 SHEQ5VZ18 495 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 RNF128Q8TEB7 428 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 MCOLN1Q9GZU1 580 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 SELENOPP49908 381 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 ADIRFQ15847 76 aa3.44□□□□□ -1.86
ATXN3-248ENST00000558190 MUC20Q8N307 709 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-248ENST00000558190 HSD17B11Q8NBQ5 300 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms