RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 MCTS1Q9ULC4 181 aaKnown RBP19.07■□□□□ 0.64
CASC4-204ENST00000557945 FAM215AQ9Y5M1 114 aa19.07■□□□□ 0.64
CASC4-204ENST00000557945 TRAV36DV7A0A075B6V5 113 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 SLC22A20A6NK97 555 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 KDM4EB2RXH2 506 aaPredicted RBP19.06■□□□□ 0.64
CASC4-204ENST00000557945 CCL21O00585 134 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 PMS2P2O95744 297 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 IMPDH2P12268 514 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 HOXB6P17509 224 aaKnown RBP19.06■□□□□ 0.64
CASC4-204ENST00000557945 RRM2P31350 389 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 RBM34P42696 430 aaKnown RBP19.06■□□□□ 0.64
CASC4-204ENST00000557945 SMIM11AP58511 58 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 RAC3P60763 192 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 OR7A5Q15622 319 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 RTL6Q6ICC9 239 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 C5orf46Q6UWT4 87 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 RPRMLQ8N4K4 120 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 TMEM239Q8WW34 195 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 CPNE4Q96A23 557 aaPredicted RBP19.06■□□□□ 0.64
CASC4-204ENST00000557945 SLC25A36Q96CQ1 311 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 HS6ST2Q96MM7 605 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 YY1AP1Q9H869 796 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 CALHM2Q9HA72 323 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 CCM2LQ9NUG4 571 aaPredicted RBP19.06■□□□□ 0.64
CASC4-204ENST00000557945 TRAPPC4Q9Y296 219 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 FKBP6O75344 327 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 GADD45GO95257 159 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 FPR1P21462 350 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 ACTR3P61158 418 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 SLC35A1P78382 337 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 NSUN5P2Q63ZY6 315 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 FJX1Q86VR8 437 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 FNDC9Q8TBE3 224 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 ROBO4Q8WZ75 1007 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 TAAR8Q969N4 342 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 SLCO4A1Q96BD0 722 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 ZHX1-C8orf76Q96EF9 292 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 ZNF426Q9BUY5 554 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 ANKRD19PQ9H560 264 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 MEMO1Q9Y316 297 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 MED31Q9Y3C7 131 aa19.06■□□□□ 0.64
CASC4-204ENST00000557945 IGHV3-15A0A0B4J1V0 119 aa19.05■□□□□ 0.64
CASC4-204ENST00000557945 A0A1B0GUH1 482 aa19.05■□□□□ 0.64
CASC4-204ENST00000557945 A0A1W2PRQ8 180 aa19.05■□□□□ 0.64
CASC4-204ENST00000557945 CD8B2A6NJW9 211 aa19.05■□□□□ 0.64
CASC4-204ENST00000557945 LIPT2A6NK58 231 aa19.05■□□□□ 0.64
CASC4-204ENST00000557945 E9PLN8 166 aa19.05■□□□□ 0.64
CASC4-204ENST00000557945 LRRTM2O43300 516 aa19.05■□□□□ 0.64
CASC4-204ENST00000557945 OR2T1O43869 369 aa19.05■□□□□ 0.64
CASC4-204ENST00000557945 ENPP1P22413 925 aa19.05■□□□□ 0.64
CASC4-204ENST00000557945 CBLP22681 906 aa19.05■□□□□ 0.64
CASC4-204ENST00000557945 GTF2E2P29084 291 aaKnown RBP19.05■□□□□ 0.64
CASC4-204ENST00000557945 UGT2B15P54855 530 aa19.05■□□□□ 0.64
CASC4-204ENST00000557945 PMPCAQ10713 525 aa19.05■□□□□ 0.64
CASC4-204ENST00000557945 DGCR6Q14129 220 aa19.05■□□□□ 0.64
CASC4-204ENST00000557945 ZNF239Q16600 458 aaKnown RBP19.05■□□□□ 0.64
CASC4-204ENST00000557945 ZNF730Q6ZMV8 503 aa19.05■□□□□ 0.64
CASC4-204ENST00000557945 RRM2BQ7LG56 351 aa19.05■□□□□ 0.64
CASC4-204ENST00000557945 ADGRE4PQ86SQ3 457 aa19.05■□□□□ 0.64
CASC4-204ENST00000557945 PFN4Q8NHR9 129 aa19.05■□□□□ 0.64
CASC4-204ENST00000557945 DHRS1Q96LJ7 313 aa19.05■□□□□ 0.64
CASC4-204ENST00000557945 VKORC1Q9BQB6 163 aa19.05■□□□□ 0.64
CASC4-204ENST00000557945 TTYH2Q9BSA4 534 aa19.05■□□□□ 0.64
CASC4-204ENST00000557945 PTDSS2Q9BVG9 487 aa19.05■□□□□ 0.64
CASC4-204ENST00000557945 SLC19A3Q9BZV2 496 aa19.05■□□□□ 0.64
CASC4-204ENST00000557945 DENND2DQ9H6A0 471 aaPredicted RBP19.05■□□□□ 0.64
CASC4-204ENST00000557945 CLCF1Q9UBD9 225 aa19.05■□□□□ 0.64
CASC4-204ENST00000557945 ZNF175Q9Y473 711 aa19.05■□□□□ 0.64
CASC4-204ENST00000557945 J3QKU1 62 aa19.04■□□□□ 0.64
CASC4-204ENST00000557945 TGM6O95932 706 aa19.04■□□□□ 0.64
CASC4-204ENST00000557945 FAM69AQ5T7M9 428 aa19.04■□□□□ 0.64
CASC4-204ENST00000557945 TMEM211Q6ICI0 200 aa19.04■□□□□ 0.64
CASC4-204ENST00000557945 OR2T5Q6IEZ7 315 aa19.04■□□□□ 0.64
CASC4-204ENST00000557945 PODNL1Q6PEZ8 512 aa19.04■□□□□ 0.64
CASC4-204ENST00000557945 NCCRP1Q6ZVX7 275 aaPredicted RBP19.04■□□□□ 0.64
CASC4-204ENST00000557945 PAPD5Q8NDF8 572 aaKnown RBP19.04■□□□□ 0.64
CASC4-204ENST00000557945 OR2T29Q8NH02 315 aa19.04■□□□□ 0.64
CASC4-204ENST00000557945 MFSD8Q8NHS3 518 aa19.04■□□□□ 0.64
CASC4-204ENST00000557945 ACOT11Q8WXI4 607 aaPredicted RBP19.04■□□□□ 0.64
CASC4-204ENST00000557945 WNT2BQ93097 391 aa19.04■□□□□ 0.64
CASC4-204ENST00000557945 KLHL4Q9C0H6 718 aa19.04■□□□□ 0.64
CASC4-204ENST00000557945 C6orf203Q9P0P8 240 aaPredicted RBP19.04■□□□□ 0.64
CASC4-204ENST00000557945 MPDZO75970 2070 aa19.04■□□□□ 0.64
CASC4-204ENST00000557945 TRBV4-1A0A0J9YWV2 114 aa19.03■□□□□ 0.64
CASC4-204ENST00000557945 ENO4A6NNW6 628 aa19.03■□□□□ 0.64
CASC4-204ENST00000557945 GNGT2O14610 69 aa19.03■□□□□ 0.64
CASC4-204ENST00000557945 CH25HO95992 272 aa19.03■□□□□ 0.64
CASC4-204ENST00000557945 CST1P01037 141 aa19.03■□□□□ 0.64
CASC4-204ENST00000557945 GLI4P10075 376 aa19.03■□□□□ 0.64
CASC4-204ENST00000557945 KLK2P20151 261 aa19.03■□□□□ 0.64
CASC4-204ENST00000557945 C4orf17Q53FE4 359 aa19.03■□□□□ 0.64
CASC4-204ENST00000557945 TBPL2Q6SJ96 375 aa19.03■□□□□ 0.64
CASC4-204ENST00000557945 SEM1Q6ZVN7 128 aa19.03■□□□□ 0.64
CASC4-204ENST00000557945 C9orf106Q8NAJ2 232 aa19.03■□□□□ 0.64
CASC4-204ENST00000557945 SLC7A13Q8TCU3 470 aa19.03■□□□□ 0.64
CASC4-204ENST00000557945 ALPK1Q96QP1 1244 aa19.03■□□□□ 0.64
CASC4-204ENST00000557945 UCN2Q96RP3 112 aa19.03■□□□□ 0.64
CASC4-204ENST00000557945 NAA11Q9BSU3 229 aaPredicted RBP19.03■□□□□ 0.64
CASC4-204ENST00000557945 REEP1Q9H902 201 aa19.03■□□□□ 0.64
CASC4-204ENST00000557945 MEPEQ9NQ76 525 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms