RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 RAD21L1Q9H4I0 556 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 TMEM231Q9H6L2 316 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 SYNDIG1Q9H7V2 258 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 NANOGQ9H9S0 305 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 IL1RL2Q9HB29 575 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 SGK2Q9HBY8 427 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 ZCCHC3Q9NUD5 404 aaKnown RBP4.68□□□□□ -1.66
SRP54-211ENST00000556445 SEMA5BQ9P283 1151 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 IL20RAQ9UHF4 553 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 RAB26Q9ULW5 256 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 PCM1Q15154 2024 aa4.68□□□□□ -1.66
SRP54-211ENST00000556445 SRCAPQ6ZRS2 3230 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 A0A096LPI6 279 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 A0A0U1RQV5 110 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 A0A1W2PPQ1 181 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 DHRS12A0PJE2 317 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 TMEM202A6NGA9 273 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 E7EQ34 232 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 H3BNX3 289 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 ADAM10O14672 748 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 FPGTO14772 594 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 ARPC2O15144 300 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 ZNF264O43296 627 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 SEMA3DO95025 777 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 OR6A2O95222 327 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 LGI1O95970 557 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 PAK4O96013 591 aaPredicted RBP4.67□□□□□ -1.66
SRP54-211ENST00000556445 CSTAP01040 98 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 RPSAP08865 295 aaKnown RBP4.67□□□□□ -1.66
SRP54-211ENST00000556445 ANKRD34CP0C6C1 535 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 ZCCHC18P0CG32 403 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 UQCRBP14927 111 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 IL1RNP18510 177 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 SDC1P18827 310 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 FASP25445 335 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 RYKP34925 604 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 ZFP36L2P47974 494 aaKnown RBP4.67□□□□□ -1.66
SRP54-211ENST00000556445 GSK3BP49841 420 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 ENTPD1P49961 510 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 ASCL1P50553 236 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 CCR8P51685 355 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 TAS2R38P59533 333 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 TBPL1P62380 186 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 TXNL4AP83876 142 aaKnown RBP4.67□□□□□ -1.66
SRP54-211ENST00000556445 CFHR1Q03591 330 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 MAB21L1Q13394 359 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 IL18Q14116 193 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 IRF4Q15306 451 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 PAGE3Q5JUK9 113 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 LCE1AQ5T7P2 110 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 GLYATQ6IB77 296 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 CAPRIN2Q6IMN6 1127 aaKnown RBP4.67□□□□□ -1.66
SRP54-211ENST00000556445 DOK6Q6PKX4 331 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 WASH2PQ6VEQ5 465 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 TRILQ7L0X0 811 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 MDGA2Q7Z553 956 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 TMPRSS11BQ86T26 416 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 ASPGQ86U10 573 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 TBC1D26Q86UD7 250 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 TRIM74Q86UV6 250 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 ZNF547Q8IVP9 402 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 EID3Q8N140 333 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 C9orf106Q8NAJ2 232 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 TRPV3Q8NET8 790 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 OR8J2Q8NGG1 315 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 PRSS3P2Q8NHM4 247 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 WIPF2Q8TF74 440 aaPredicted RBP4.67□□□□□ -1.66
SRP54-211ENST00000556445 NAT14Q8WUY8 206 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 PIGKQ92643 395 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 GTF2H4Q92759 462 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 EME1Q96AY2 570 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 PPWD1Q96BP3 646 aaKnown RBP4.67□□□□□ -1.66
SRP54-211ENST00000556445 TEX37Q96LM6 180 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 APOLD1Q96LR9 279 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 CCDC115Q96NT0 180 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 APOOQ9BUR5 198 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 C9orf16Q9BUW7 83 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 ALG12Q9BV10 488 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 MRPL13Q9BYD1 178 aaKnown RBP4.67□□□□□ -1.66
SRP54-211ENST00000556445 ACTL8Q9H568 366 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 CHMP1AQ9HD42 196 aaPredicted RBP4.67□□□□□ -1.66
SRP54-211ENST00000556445 CMTM6Q9NX76 183 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 IL20Q9NYY1 176 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 OR6C2Q9NZP2 312 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 NDUFA13Q9P0J0 144 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 SLC17A4Q9Y2C5 497 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 MTCH2Q9Y6C9 303 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 COLEC10Q9Y6Z7 277 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 TICRRQ7Z2Z1 1910 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 CROCCQ5TZA2 2017 aa4.67□□□□□ -1.66
SRP54-211ENST00000556445 A0A0U1RRA0 63 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 GNG14A0A1W2PPG7 69 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 CPED1A4D0V7 1026 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 ASPDHA6ND91 283 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 FAM220BPB1ANY3 271 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 RFXANKO14593 260 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 SCAMP2O15127 329 aaKnown RBP4.66□□□□□ -1.66
SRP54-211ENST00000556445 SORBS2O94875 1100 aaKnown RBP4.66□□□□□ -1.66
SRP54-211ENST00000556445 EGFP01133 1207 aa4.66□□□□□ -1.66
SRP54-211ENST00000556445 HLA-DQA2P01906 255 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms