RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 NOS3P29474 1203 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 EPHB3P54753 998 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 SCAND1P57086 179 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 SLC7A9P82251 487 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 CRMP1Q14194 572 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 MELKQ14680 651 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 C2orf68Q2NKX9 166 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 ZNF528Q3MIS6 628 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 C18orf63Q68DL7 685 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 DHRS7BQ6IAN0 325 aaPredicted RBP7.17□□□□□ -1.26
CHD8-209ENST00000555935 C11orf88Q6PI97 169 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 SERPINA12Q8IW75 414 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 CCDC116Q8IYX3 515 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 MUC20Q8N307 709 aaPredicted RBP7.17□□□□□ -1.26
CHD8-209ENST00000555935 KCNRGQ8N5I3 272 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 C2orf73Q8N5S3 287 aaPredicted RBP7.17□□□□□ -1.26
CHD8-209ENST00000555935 AMER3Q8N944 861 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 OR2L2Q8NH16 312 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 EDAQ92838 391 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 FERD3LQ96RJ6 166 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 SMAD5Q99717 465 aaKnown RBP7.17□□□□□ -1.26
CHD8-209ENST00000555935 ENKD1Q9H0I2 346 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 OR2AG1Q9H205 316 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 ZNF334Q9HCZ1 680 aaPredicted RBP7.17□□□□□ -1.26
CHD8-209ENST00000555935 CLDND1Q9NY35 253 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 MBD2Q9UBB5 411 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 OR5V1Q9UGF6 321 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 GPN3Q9UHW5 284 aaPredicted RBP7.17□□□□□ -1.26
CHD8-209ENST00000555935 PLAGL1Q9UM63 463 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 SIGLEC7Q9Y286 467 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 COL4A3Q01955 1670 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 FEZF1A0PJY2 475 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 TMEM218A2RU14 115 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 H7BY64 318 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 H7C417 338 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 PIN1P1O15428 100 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 OR1F1O43749 312 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 RAD1O60671 282 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 POP7O75817 140 aaKnown RBP7.16□□□□□ -1.26
CHD8-209ENST00000555935 OR2F2O95006 317 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 ZIC2O95409 532 aaPredicted RBP7.16□□□□□ -1.26
CHD8-209ENST00000555935 PAK4O96013 591 aaPredicted RBP7.16□□□□□ -1.26
CHD8-209ENST00000555935 RPN2P04844 631 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 CKMP06732 381 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 THBS1P07996 1170 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 EPCAMP16422 314 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 LAG3P18627 525 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 MPIP34949 423 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 ZNF136P52737 540 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 PDX1P52945 283 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 POLR2GP62487 172 aaKnown RBP eCLIP7.16□□□□□ -1.26
CHD8-209ENST00000555935 OC90Q02509 493 aaPredicted RBP7.16□□□□□ -1.26
CHD8-209ENST00000555935 OR2F1Q13607 317 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 GGTLC2Q14390 218 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 AGERQ15109 404 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 DCAF12L2Q5VW00 463 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 ELP2Q6IA86 826 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 ARHGAP11AQ6P4F7 1023 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 ZNF836Q6ZNA1 936 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 FRRS1Q6ZNA5 592 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 ZNF546Q86UE3 836 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 NPAS4Q8IUM7 802 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 TMEM185AQ8NFB2 350 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 OR5AR1Q8NGP9 310 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 SNX33Q8WV41 574 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 CCDC107Q8WV48 283 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 CNRIP1Q96F85 164 aaPredicted RBP7.16□□□□□ -1.26
CHD8-209ENST00000555935 DTD2Q96FN9 168 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 CNN2Q99439 309 aaKnown RBP7.16□□□□□ -1.26
CHD8-209ENST00000555935 SLITRK2Q9H156 845 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 OR52A5Q9H2C5 316 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 IL21Q9HBE4 155 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 APMAPQ9HDC9 416 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 TMEM138Q9NPI0 162 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 MTFP1Q9UDX5 166 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 GPR34Q9UPC5 381 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.16□□□□□ -1.26
CHD8-209ENST00000555935 BCL2L11O43521 198 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 FCMRO60667 390 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 GLSO94925 669 aaPredicted RBP7.16□□□□□ -1.26
CHD8-209ENST00000555935 CD8AP01732 235 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 CLUP10909 449 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 CST5P28325 142 aaPredicted RBP7.16□□□□□ -1.26
CHD8-209ENST00000555935 NDUFS1P28331 727 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 MC3RP41968 323 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 PPIAP62937 165 aaKnown RBP7.16□□□□□ -1.26
CHD8-209ENST00000555935 FKBP1BP68106 108 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 IRF4Q15306 451 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 PAN3Q58A45 887 aaKnown RBP7.16□□□□□ -1.26
CHD8-209ENST00000555935 LPCAT3Q6P1A2 487 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 THSD4Q6ZMP0 1018 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 ZNF793Q6ZN11 406 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 LDLRAD3Q86YD5 345 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 PUSL1Q8N0Z8 303 aaKnown RBP7.16□□□□□ -1.26
CHD8-209ENST00000555935 C12orf45Q8N5I9 185 aaPredicted RBP7.16□□□□□ -1.26
CHD8-209ENST00000555935 ZNF433Q8N7K0 673 aaPredicted RBP7.16□□□□□ -1.26
CHD8-209ENST00000555935 PCSK9Q8NBP7 692 aaKnown RBP7.16□□□□□ -1.26
CHD8-209ENST00000555935 DMBX1Q8NFW5 382 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 OR4C16Q8NGL9 310 aa7.16□□□□□ -1.26
CHD8-209ENST00000555935 PFN4Q8NHR9 129 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms