RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 NET1Q7Z628 596 aaPredicted RBP18.16■□□□□ 0.5
VTI1B-205ENST00000555543 C11orf65Q8NCR3 313 aa18.16■□□□□ 0.5
VTI1B-205ENST00000555543 NINJ1Q92982 152 aa18.16■□□□□ 0.5
VTI1B-205ENST00000555543 S100PBPQ96BU1 408 aa18.16■□□□□ 0.5
VTI1B-205ENST00000555543 SPATA5L1Q9BVQ7 753 aa18.16■□□□□ 0.5
VTI1B-205ENST00000555543 PRR14Q9BWN1 585 aa18.16■□□□□ 0.5
VTI1B-205ENST00000555543 FANCFQ9NPI8 374 aa18.16■□□□□ 0.5
VTI1B-205ENST00000555543 EMC3Q9P0I2 261 aa18.16■□□□□ 0.5
VTI1B-205ENST00000555543 ANGPT4Q9Y264 503 aa18.16■□□□□ 0.5
VTI1B-205ENST00000555543 A8MVM7 634 aa18.15■□□□□ 0.5
VTI1B-205ENST00000555543 EIF1BO60739 113 aaKnown RBP18.15■□□□□ 0.5
VTI1B-205ENST00000555543 NPIPB7O75200 414 aa18.15■□□□□ 0.5
VTI1B-205ENST00000555543 MFN2O95140 757 aa18.15■□□□□ 0.5
VTI1B-205ENST00000555543 ADSLP30566 484 aaPredicted RBP18.15■□□□□ 0.5
VTI1B-205ENST00000555543 GZMMP51124 257 aa18.15■□□□□ 0.5
VTI1B-205ENST00000555543 OR7A5Q15622 319 aa18.15■□□□□ 0.5
VTI1B-205ENST00000555543 SFRP5Q5T4F7 317 aa18.15■□□□□ 0.5
VTI1B-205ENST00000555543 REP15Q6BDI9 236 aa18.15■□□□□ 0.5
VTI1B-205ENST00000555543 PAQR6Q6TCH4 344 aa18.15■□□□□ 0.5
VTI1B-205ENST00000555543 Q6ZT83 130 aa18.15■□□□□ 0.5
VTI1B-205ENST00000555543 SNX32Q86XE0 403 aa18.15■□□□□ 0.5
VTI1B-205ENST00000555543 ARMC8Q8IUR7 673 aa18.15■□□□□ 0.5
VTI1B-205ENST00000555543 ZNF607Q96SK3 696 aa18.15■□□□□ 0.5
VTI1B-205ENST00000555543 OR10A4Q9H209 315 aa18.15■□□□□ 0.5
VTI1B-205ENST00000555543 NOSIPQ9Y314 301 aaKnown RBP18.15■□□□□ 0.5
VTI1B-205ENST00000555543 A0A1B0GWA3 101 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 PRORSD1PA6NEY8 169 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 MRASO14807 208 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 KLF4O43474 513 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 AKR7A3O95154 331 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 IGHV3-9P01782 118 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 OPN1SWP03999 348 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 GPIP06744 558 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 ART1P52961 327 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 EGR4Q05215 589 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 RBBP4Q09028 425 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 SLC17A1Q14916 467 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 RABL3Q5HYI8 236 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 C1orf140Q5VVS0 124 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 NANOGP8Q6NSW7 305 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 WFDC8Q8IUA0 241 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 ZNF100Q8IYN0 542 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 TMEM99Q8N816 258 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 SMYD1Q8NB12 490 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 STEAP2Q8NFT2 490 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 OR10A6Q8NH74 314 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 PIF1Q9H611 641 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 NANOGQ9H9S0 305 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 MRGBPQ9NV56 204 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 ARMCX1Q9P291 453 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 FLVCR1Q9Y5Y0 555 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 ITPR3Q14573 2671 aa18.14■□□□□ 0.49
VTI1B-205ENST00000555543 VPS13CQ709C8 3753 aa18.13■□□□□ 0.49
VTI1B-205ENST00000555543 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.13■□□□□ 0.49
VTI1B-205ENST00000555543 TPST2O60704 377 aa18.13■□□□□ 0.49
VTI1B-205ENST00000555543 SERPINB7O75635 380 aa18.13■□□□□ 0.49
VTI1B-205ENST00000555543 LYZL6O75951 148 aa18.13■□□□□ 0.49
VTI1B-205ENST00000555543 ATE1O95260 518 aa18.13■□□□□ 0.49
VTI1B-205ENST00000555543 COX5AP20674 150 aa18.13■□□□□ 0.49
VTI1B-205ENST00000555543 IL32P24001 234 aa18.13■□□□□ 0.49
VTI1B-205ENST00000555543 P2RY4P51582 365 aa18.13■□□□□ 0.49
VTI1B-205ENST00000555543 ITGADQ13349 1161 aa18.13■□□□□ 0.49
VTI1B-205ENST00000555543 P2RY6Q15077 328 aa18.13■□□□□ 0.49
VTI1B-205ENST00000555543 COQ5Q5HYK3 327 aa18.13■□□□□ 0.49
VTI1B-205ENST00000555543 OTUD3Q5T2D3 398 aaPredicted RBP18.13■□□□□ 0.49
VTI1B-205ENST00000555543 C6orf89Q6UWU4 347 aa18.13■□□□□ 0.49
VTI1B-205ENST00000555543 LSMEM1Q8N8F7 131 aa18.13■□□□□ 0.49
VTI1B-205ENST00000555543 GPR32P1Q8NGA4 272 aa18.13■□□□□ 0.49
VTI1B-205ENST00000555543 KISS1RQ969F8 398 aaPredicted RBP18.13■□□□□ 0.49
VTI1B-205ENST00000555543 LRRC58Q96CX6 371 aa18.13■□□□□ 0.49
VTI1B-205ENST00000555543 NAA11Q9BSU3 229 aaPredicted RBP18.13■□□□□ 0.49
VTI1B-205ENST00000555543 PTDSS2Q9BVG9 487 aa18.13■□□□□ 0.49
VTI1B-205ENST00000555543 ADPRHL2Q9NX46 363 aa18.13■□□□□ 0.49
VTI1B-205ENST00000555543 RPS6KB2Q9UBS0 482 aa18.13■□□□□ 0.49
VTI1B-205ENST00000555543 CAPN7Q9Y6W3 813 aa18.13■□□□□ 0.49
VTI1B-205ENST00000555543 LOC100653049A0A140TA62 436 aa18.12■□□□□ 0.49
VTI1B-205ENST00000555543 AQP7P3A6NL99 342 aa18.12■□□□□ 0.49
VTI1B-205ENST00000555543 BBIP1A8MTZ0 92 aa18.12■□□□□ 0.49
VTI1B-205ENST00000555543 GPR171O14626 319 aa18.12■□□□□ 0.49
VTI1B-205ENST00000555543 KRT34O76011 436 aa18.12■□□□□ 0.49
VTI1B-205ENST00000555543 RAF1P04049 648 aa18.12■□□□□ 0.49
VTI1B-205ENST00000555543 IGHV1-2P23083 117 aa18.12■□□□□ 0.49
VTI1B-205ENST00000555543 DNASE1P24855 282 aa18.12■□□□□ 0.49
VTI1B-205ENST00000555543 PCGF2P35227 344 aa18.12■□□□□ 0.49
VTI1B-205ENST00000555543 RGS8P57771 180 aaPredicted RBP18.12■□□□□ 0.49
VTI1B-205ENST00000555543 CYLC2Q14093 348 aaPredicted RBP18.12■□□□□ 0.49
VTI1B-205ENST00000555543 DUSP7Q16829 419 aa18.12■□□□□ 0.49
VTI1B-205ENST00000555543 MMEL1Q495T6 779 aa18.12■□□□□ 0.49
VTI1B-205ENST00000555543 ALKBH2Q6NS38 261 aa18.12■□□□□ 0.49
VTI1B-205ENST00000555543 SPNS3Q6ZMD2 512 aa18.12■□□□□ 0.49
VTI1B-205ENST00000555543 BHLHA15Q7RTS1 189 aaPredicted RBP18.12■□□□□ 0.49
VTI1B-205ENST00000555543 OR52E4Q8NGH9 312 aa18.12■□□□□ 0.49
VTI1B-205ENST00000555543 STK35Q8TDR2 534 aa18.12■□□□□ 0.49
VTI1B-205ENST00000555543 APH1AQ96BI3 265 aa18.12■□□□□ 0.49
VTI1B-205ENST00000555543 KTI12Q96EK9 354 aaPredicted RBP18.12■□□□□ 0.49
VTI1B-205ENST00000555543 HDHD5Q9BXW7 423 aa18.12■□□□□ 0.49
VTI1B-205ENST00000555543 TESQ9UGI8 421 aaKnown RBP18.12■□□□□ 0.49
VTI1B-205ENST00000555543 USP22Q9UPT9 525 aa18.12■□□□□ 0.49
VTI1B-205ENST00000555543 IGKV1D-42A0A075B6H8 117 aa18.11■□□□□ 0.49
VTI1B-205ENST00000555543 ELOA3DA6NLF2 546 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms