RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 PSMB1P20618 241 aaKnown RBP2.24□□□□□ -2.05
SCFD1-213ENST00000554776 COX5AP20674 150 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 ZP3P21754 424 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 NMT1P30419 496 aaKnown RBP2.24□□□□□ -2.05
SCFD1-213ENST00000554776 NTSP30990 170 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 HNRNPH3P31942 346 aaKnown RBP2.24□□□□□ -2.05
SCFD1-213ENST00000554776 UGT1A5P35504 534 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 PTGDSP41222 190 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 NDPQ00604 133 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 TGFBR3Q03167 851 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 CHRNB3Q05901 458 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 OXA1LQ15070 435 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 KYAT1Q16773 422 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 CFAP221Q4G0U5 840 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 PRR30Q53SZ7 412 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-213ENST00000554776 OR52E8Q6IFG1 317 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 ENPP6Q6UWR7 440 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 UNQ9370/PRO34162Q6UXP9 181 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 ZYG11AQ6WRX3 759 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 ARCQ7LC44 396 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 TMEM179BQ7Z7N9 219 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 TGIF2LYQ8IUE0 185 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 UBE2J2Q8N2K1 259 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 OR52I1Q8NGK6 324 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 OR1L6Q8NGR2 347 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 ZNF564Q8TBZ8 553 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-213ENST00000554776 MAGEE2Q8TD90 523 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-213ENST00000554776 DNAJA4Q8WW22 397 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-213ENST00000554776 CHCHD10Q8WYQ3 142 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-213ENST00000554776 MRPS31Q92665 395 aaKnown RBP2.24□□□□□ -2.05
SCFD1-213ENST00000554776 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.24□□□□□ -2.052e-9■■■■■ 43.2
SCFD1-213ENST00000554776 FGGYQ96C11 551 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 TUBGCP3Q96CW5 907 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 CXorf40BQ96DE9 158 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 CMTM7Q96FZ5 175 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 OXGR1Q96P68 337 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 CLCC1Q96S66 551 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 PLEKHF1Q96S99 279 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 NAT9Q9BTE0 207 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 PARD6BQ9BYG5 372 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 REEP4Q9H6H4 257 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 VNN3Q9NY84 501 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 SLC7A8Q9UHI5 535 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 ABCG2Q9UNQ0 655 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 COPS3Q9UNS2 423 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 TRAF3IP3Q9Y228 551 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 IFT52Q9Y366 437 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 UGT2A1Q9Y4X1 527 aa2.24□□□□□ -2.05
SCFD1-213ENST00000554776 NSG1A0A0A6YYJ2 146 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 KIR2DL5BA0A0G2JN68 375 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 KIR2DL5BA0A0G2JPC4 375 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 XKRY2A2RUG3 117 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 FAM47DPA6NHR8 397 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 A6NIZ1 184 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 HAS3O00219 553 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 UGT1A9O60656 530 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 TOM1O60784 492 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 ECI2O75521 394 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 IGHV3-48P01763 117 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 SEMG1P04279 462 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 P04436 131 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 DUX4L4P0CJ87 422 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 ATP1B2P14415 290 aaPredicted RBP2.23□□□□□ -2.05
SCFD1-213ENST00000554776 CXCR2P25025 360 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 CALCRP30988 508 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 SHMT2P34897 504 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 GPM6AP51674 278 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 STX17P56962 302 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 RAP1BP61224 184 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 ENPEPQ07075 957 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 EGFEM1PQ0D2K5 195 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 LRRC74AQ0VAA2 488 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 GK3PQ14409 553 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 IMMTQ16891 758 aaKnown RBP2.23□□□□□ -2.05
SCFD1-213ENST00000554776 ISXQ2M1V0 245 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 KLHL38Q2WGJ6 581 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 FILIP1LQ4L180 1135 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 PRAMEF5Q5TYX0 476 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 PRAMEF6Q5VXH4 476 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 HSDL2Q6YN16 418 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 KDM7AQ6ZMT4 941 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 Q6ZN92 141 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 ZNF571Q7Z3V5 609 aaPredicted RBP2.23□□□□□ -2.05
SCFD1-213ENST00000554776 SLC26A11Q86WA9 606 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 VRK2Q86Y07 508 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 KIR2DL5AQ8N109 375 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 FTMTQ8N4E7 242 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 ACOT4Q8N9L9 421 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 ZNF740Q8NDX6 193 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 KIR2DL5BQ8NHK3 375 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 HTR3CQ8WXA8 447 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 UFD1Q92890 307 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 RPUSD4Q96CM3 377 aaKnown RBP2.23□□□□□ -2.05
SCFD1-213ENST00000554776 C16orf74Q96GX8 76 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 PANX2Q96RD6 677 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 TSG101Q99816 390 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 MRPL45Q9BRJ2 306 aaKnown RBP2.23□□□□□ -2.05
SCFD1-213ENST00000554776 CHRDL1Q9BU40 450 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 RAB34Q9BZG1 259 aa2.23□□□□□ -2.05
SCFD1-213ENST00000554776 ACTR6Q9GZN1 396 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms