RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 AGR2O95994 175 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 IL7RP16871 459 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 IGFBP2P18065 325 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 GSTT1P30711 240 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 POLR2IP36954 125 aaKnown RBP11.23□□□□□ -0.61
SHMT2-214ENST00000554604 GAS1P54826 345 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 IL1RL1Q01638 556 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 FUT5Q11128 374 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 NPRL3Q12980 569 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 CDK5R2Q13319 367 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 LASP1Q14847 261 aaKnown RBP11.23□□□□□ -0.61
SHMT2-214ENST00000554604 NSUN5P2Q63ZY6 315 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 LAIR2Q6ISS4 152 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 SEM1Q6ZVN7 128 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 GPR141Q7Z602 305 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 LURAP1LQ8IV03 231 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 DMRTC2Q8IXT2 367 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-214ENST00000554604 CDRT4Q8N9R6 151 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 ACBD4Q8NC06 268 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 OR5D16Q8NGK9 328 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 GIMAP5Q96F15 307 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 HRASLS5Q96KN8 279 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 MS4A4EQ96PG1 132 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 OR7D2Q96RA2 312 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 ACTRT3Q9BYD9 372 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 TBL1XR1Q9BZK7 514 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 DSN1Q9H410 356 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 PTGES2Q9H7Z7 377 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 CALHM2Q9HA72 323 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 VCX3AQ9NNX9 186 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 PAPOLBQ9NRJ5 636 aaKnown RBP11.23□□□□□ -0.61
SHMT2-214ENST00000554604 GIN1Q9NXP7 522 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 PTTG2Q9NZH5 202 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 RPH3AQ9Y2J0 694 aaPredicted RBP11.23□□□□□ -0.61
SHMT2-214ENST00000554604 MRPS18CQ9Y3D5 142 aaKnown RBP11.23□□□□□ -0.61
SHMT2-214ENST00000554604 ABCA4P78363 2273 aa11.23□□□□□ -0.61
SHMT2-214ENST00000554604 GXYLT2A0PJZ3 443 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 DUXAA6NLW8 204 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 KDM4EB2RXH2 506 aaPredicted RBP11.22□□□□□ -0.61
SHMT2-214ENST00000554604 J3KTA2 159 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 ZNF701M0R085 212 aaPredicted RBP11.22□□□□□ -0.61
SHMT2-214ENST00000554604 SLC1A7O00341 560 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 SYT5O00445 386 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 FADS1O60427 444 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 MRPS14O60783 128 aaKnown RBP11.22□□□□□ -0.61
SHMT2-214ENST00000554604 CCNB2O95067 398 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 UTS2O95399 124 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 OXSR1O95747 527 aaPredicted RBP11.22□□□□□ -0.61
SHMT2-214ENST00000554604 CPN1P15169 458 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 CBLP22681 906 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 UQCRC1P31930 480 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 CEACAM8P31997 349 aaPredicted RBP11.22□□□□□ -0.61
SHMT2-214ENST00000554604 YAP1P46937 504 aaKnown RBP11.22□□□□□ -0.61
SHMT2-214ENST00000554604 GFRA1P56159 465 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 DSCR4P56555 118 aaPredicted RBP11.22□□□□□ -0.61
SHMT2-214ENST00000554604 SMIM11AP58511 58 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 IL5RAQ01344 420 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 MYBPHQ13203 477 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 ATAD3BQ5T9A4 648 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 HEPHL1Q6MZM0 1159 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 CDC73Q6P1J9 531 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 PARP8Q8N3A8 854 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 NAXEQ8NCW5 288 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 ZPLD1Q8TCW7 415 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 DUSP19Q8WTR2 217 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 RNF138Q8WVD3 245 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 PIK3R3Q92569 461 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 TRNT1Q96Q11 434 aaKnown RBP11.22□□□□□ -0.61
SHMT2-214ENST00000554604 FEVQ99581 238 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 ZNF559Q9BR84 538 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 PINK1Q9BXM7 581 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 MCCC2Q9HCC0 563 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 FLRT3Q9NZU0 649 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 DSPPQ9NZW4 1301 aa11.22□□□□□ -0.61
SHMT2-214ENST00000554604 ZNF629Q9UEG4 869 aaPredicted RBP11.22□□□□□ -0.61
SHMT2-214ENST00000554604 RSL24D1Q9UHA3 163 aaKnown RBP11.22□□□□□ -0.61
SHMT2-214ENST00000554604 CCDC160A6NGH7 325 aa11.21□□□□□ -0.61
SHMT2-214ENST00000554604 C17orf51A8MQB3 221 aa11.21□□□□□ -0.61
SHMT2-214ENST00000554604 H3BSA7 217 aa11.21□□□□□ -0.61
SHMT2-214ENST00000554604 FAAHO00519 579 aa11.21□□□□□ -0.61
SHMT2-214ENST00000554604 ZIC3O60481 467 aa11.21□□□□□ -0.61
SHMT2-214ENST00000554604 NKX2-2O95096 273 aa11.21□□□□□ -0.61
SHMT2-214ENST00000554604 ANGPTL1O95841 491 aa11.21□□□□□ -0.61
SHMT2-214ENST00000554604 CHRM4P08173 479 aa11.21□□□□□ -0.61
SHMT2-214ENST00000554604 ALOX5P09917 674 aa11.21□□□□□ -0.61
SHMT2-214ENST00000554604 HPGDP15428 266 aa11.21□□□□□ -0.61
SHMT2-214ENST00000554604 CHMP24386 653 aa11.21□□□□□ -0.61
SHMT2-214ENST00000554604 EEF1B2P24534 225 aaKnown RBP11.21□□□□□ -0.61
SHMT2-214ENST00000554604 STARP49675 285 aa11.21□□□□□ -0.61
SHMT2-214ENST00000554604 ASCL1P50553 236 aa11.21□□□□□ -0.61
SHMT2-214ENST00000554604 TEKQ02763 1124 aa11.21□□□□□ -0.61
SHMT2-214ENST00000554604 C17orf67Q0P5P2 114 aa11.21□□□□□ -0.61
SHMT2-214ENST00000554604 GANABQ14697 944 aaKnown RBP11.21□□□□□ -0.61
SHMT2-214ENST00000554604 MAD2L1BPQ15013 274 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-214ENST00000554604 EXOSC6Q5RKV6 272 aaKnown RBP11.21□□□□□ -0.61
SHMT2-214ENST00000554604 RAET1LQ5VY80 246 aa11.21□□□□□ -0.61
SHMT2-214ENST00000554604 MFSD12Q6NUT3 480 aa11.21□□□□□ -0.61
SHMT2-214ENST00000554604 ZCCHC12Q6PEW1 402 aa11.21□□□□□ -0.61
SHMT2-214ENST00000554604 KCTD8Q6ZWB6 473 aa11.21□□□□□ -0.61
SHMT2-214ENST00000554604 CHMP1BQ7LBR1 199 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms