RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 OPN1SWP03999 348 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 GP1BAP07359 652 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 DUX4L2P0CJ85 424 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 DUX4L3P0CJ86 424 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 DUX4L4P0CJ87 422 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 DUX4L5P0CJ88 424 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 DUX4L6P0CJ89 424 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 DUX4L7P0CJ90 424 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 PSKH1P11801 424 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 ANXA3P12429 323 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 TNFRSF1AP19438 455 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 KELP23276 732 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 STOMP27105 288 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 SLC6A1P30531 599 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 NTSP30990 170 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 SOX3P41225 446 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 HTR2BP41595 481 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 TSFMP43897 325 aaKnown RBP5.45□□□□□ -1.54
VPS33B-203ENST00000554264 OR1E2P47887 323 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 RFX3P48380 749 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 MAPK12P53778 367 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 TAS2R50P59544 299 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 RAB14P61106 215 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 TBPL1P62380 186 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 DGCR2P98153 550 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 HHEXQ03014 270 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 HSF2Q03933 536 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 SRSF1Q07955 248 aaKnown RBP eCLIP5.45□□□□□ -1.54
VPS33B-203ENST00000554264 ST3GAL3Q11203 375 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 IL18Q14116 193 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 GINS1Q14691 196 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 TRAM2Q15035 370 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 CST6Q15828 149 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 SNAPC1Q16533 368 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 CARTPTQ16568 116 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 HNRNPA1L2Q32P51 320 aaKnown RBP5.45□□□□□ -1.54
VPS33B-203ENST00000554264 SPDYE7PQ495Y7 208 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 CCDC58Q4VC31 144 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 TMEM35AQ53FP2 167 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.45□□□□□ -1.54
VPS33B-203ENST00000554264 SLC22A10Q63ZE4 541 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 HBMQ6B0K9 141 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 C22orf42Q6IC83 251 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 PYHIN1Q6K0P9 492 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 CNIH2Q6PI25 160 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 TMEM107Q6UX40 140 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 TMIGD1Q6UXZ0 262 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 Q6ZPB1 254 aaPredicted RBP5.45□□□□□ -1.54
VPS33B-203ENST00000554264 RRM2BQ7LG56 351 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 GALNT10Q86SR1 603 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 TMPRSS11BQ86T26 416 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 SLC9B2Q86UD5 537 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 TSPAN33Q86UF1 283 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 IQCHQ86VS3 1027 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 SAMD14Q8IZD0 417 aaPredicted RBP5.45□□□□□ -1.54
VPS33B-203ENST00000554264 ADGRF3Q8IZF5 1079 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 YIPF7Q8N8F6 280 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 TEX19Q8NA77 164 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 ATP6V1C2Q8NEY4 427 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 OR56A1Q8NGH5 318 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 SLC2A12Q8TD20 617 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 HAVCR2Q8TDQ0 301 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 SLC38A5Q8WUX1 472 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 ST8SIA2Q92186 375 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 SMPDL3AQ92484 453 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 PHYHIPQ92561 330 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 PMM1Q92871 262 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 GLYATL1Q969I3 302 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 NEIL2Q969S2 332 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 RFT1Q96AA3 541 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 RAD51AP1Q96B01 352 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 TMEM19Q96HH6 336 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 SLC35G5Q96KT7 338 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 LRR1Q96L50 414 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 GPR137Q96N19 417 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 ZNF582Q96NG8 517 aaPredicted RBP5.45□□□□□ -1.54
VPS33B-203ENST00000554264 LRFN5Q96NI6 719 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 NEDD4LQ96PU5 975 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 SMIM14Q96QK8 99 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 OR4K3Q96R72 315 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 DCLRE1CQ96SD1 692 aaKnown RBP5.45□□□□□ -1.54
VPS33B-203ENST00000554264 PKP4Q99569 1192 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 SMAD5Q99717 465 aaKnown RBP5.45□□□□□ -1.54
VPS33B-203ENST00000554264 MED28Q9H204 178 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 MIXL1Q9H2W2 232 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 DPAGT1Q9H3H5 408 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 RNF167Q9H6Y7 350 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 TIGARQ9NQ88 270 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 NLGN3Q9NZ94 848 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 DNAJC27Q9NZQ0 273 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 DUX4Q9UBX2 424 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 KCNN3Q9UGI6 736 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 SERGEFQ9UGK8 458 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 GLS2Q9UI32 602 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 TEKT2Q9UIF3 430 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 EXO1Q9UQ84 846 aaKnown RBP5.45□□□□□ -1.54
VPS33B-203ENST00000554264 EXOGQ9Y2C4 368 aaKnown RBP5.45□□□□□ -1.54
VPS33B-203ENST00000554264 ALG5Q9Y673 324 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 TMEM131Q92545 1883 aa5.45□□□□□ -1.54
VPS33B-203ENST00000554264 MYO18BQ8IUG5 2567 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms