RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 EPPINO95925 133 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 ADAP00813 363 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 FSHBP01225 129 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 IGF2P01344 180 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 MT-ND1P03886 318 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 FAHP16930 419 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 ZNF26P17031 533 aaPredicted RBP4.55□□□□□ -1.68
VTI1B-202ENST00000553619 TNFRSF1BP20333 461 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 CXCR1P25024 350 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 ELAVL4P26378 380 aaKnown RBP4.55□□□□□ -1.68
VTI1B-202ENST00000553619 RYKP34925 604 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 EIF1P41567 113 aaKnown RBP4.55□□□□□ -1.68
VTI1B-202ENST00000553619 SLC1A3P43003 542 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 MASP1P48740 699 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 CLK1P49759 484 aaKnown RBP4.55□□□□□ -1.68
VTI1B-202ENST00000553619 CCR4P51679 360 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 ZNF41P51814 821 aaPredicted RBP4.55□□□□□ -1.68
VTI1B-202ENST00000553619 POLR2HP52434 150 aaKnown RBP4.55□□□□□ -1.68
VTI1B-202ENST00000553619 ZNF136P52737 540 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 UGT2B15P54855 530 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 DSCR4P56555 118 aaPredicted RBP4.55□□□□□ -1.68
VTI1B-202ENST00000553619 ESRRGP62508 458 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 Q0VFX4 171 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 CDC20Q12834 499 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 MFAP5Q13361 173 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 DAG1Q14118 895 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 GANABQ14697 944 aaKnown RBP4.55□□□□□ -1.68
VTI1B-202ENST00000553619 ICAM4Q14773 271 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 MFSD13AQ14CX5 517 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 EXOC3L2Q2M3D2 409 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 DEFB109BQ30KR1 87 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 ANKDD1AQ495B1 522 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 GLYR1Q49A26 553 aaPredicted RBP4.55□□□□□ -1.68
VTI1B-202ENST00000553619 ALG10BQ5I7T1 473 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 OTUD3Q5T2D3 398 aaPredicted RBP4.55□□□□□ -1.68
VTI1B-202ENST00000553619 FNDC7Q5VTL7 733 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 SLC25A25Q6KCM7 469 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 ZNF730Q6ZMV8 503 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 MAMDC2Q7Z304 686 aaPredicted RBP4.55□□□□□ -1.68
VTI1B-202ENST00000553619 GRINAQ7Z429 371 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 GDF7Q7Z4P5 450 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 HMGN2P46Q86SG4 172 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 VASH2Q86V25 355 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 PLCZ1Q86YW0 608 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 RBM45Q8IUH3 476 aaKnown RBP4.55□□□□□ -1.68
VTI1B-202ENST00000553619 LACC1Q8IV20 430 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 CYP4Z2PQ8N1L4 340 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 CADM2Q8N3J6 435 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 GALNT4Q8N4A0 578 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 ZADH2Q8N4Q0 377 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 CBR4Q8N4T8 237 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 TMEM178AQ8NBL3 297 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 LSM14AQ8ND56 463 aaKnown RBP4.55□□□□□ -1.68
VTI1B-202ENST00000553619 FAM71CQ8NEG0 241 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 OR10G2Q8NGC3 310 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 OR4K17Q8NGC6 315 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 OR4D11Q8NGI4 311 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 OR5M3Q8NGP4 307 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 OR52J3Q8NH60 311 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 PIGXQ8TBF5 258 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 GPR119Q8TDV5 335 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 GRHL3Q8TE85 626 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 RNF138Q8WVD3 245 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 ACOT11Q8WXI4 607 aaPredicted RBP4.55□□□□□ -1.68
VTI1B-202ENST00000553619 ST8SIA1Q92185 356 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 PSMF1Q92530 271 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 MBD6Q96DN6 1003 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 NAF1Q96HR8 494 aaKnown RBP4.55□□□□□ -1.68
VTI1B-202ENST00000553619 TMEM41AQ96HV5 264 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 C5orf34Q96MH7 638 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 ZNF184Q99676 751 aaPredicted RBP4.55□□□□□ -1.68
VTI1B-202ENST00000553619 FAM173AQ9BQD7 235 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 DGCR6LQ9BY27 220 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 SLC19A3Q9BZV2 496 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 GABARAPL1Q9H0R8 117 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 DSN1Q9H410 356 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 NTN4Q9HB63 628 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 KRT84Q9NSB2 600 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 SMPD3Q9NY59 655 aaPredicted RBP4.55□□□□□ -1.68
VTI1B-202ENST00000553619 GPR83Q9NYM4 423 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 LRFN1Q9P244 771 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 SLC7A7Q9UM01 511 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 BOKQ9UMX3 212 aaPredicted RBP4.55□□□□□ -1.68
VTI1B-202ENST00000553619 POFUT2Q9Y2G5 429 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 KLF13Q9Y2Y9 288 aaPredicted RBP4.55□□□□□ -1.68
VTI1B-202ENST00000553619 MED31Q9Y3C7 131 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 MRPS18CQ9Y3D5 142 aaKnown RBP4.55□□□□□ -1.68
VTI1B-202ENST00000553619 CHST2Q9Y4C5 530 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 LRRC42Q9Y546 428 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 WIF1Q9Y5W5 379 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 SPIN1Q9Y657 262 aaPredicted RBP4.55□□□□□ -1.68
VTI1B-202ENST00000553619 CHCHD2Q9Y6H1 151 aaPredicted RBP4.55□□□□□ -1.68
VTI1B-202ENST00000553619 U3KQV3 271 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 TRIOO75962 3097 aa4.55□□□□□ -1.68
VTI1B-202ENST00000553619 EML6Q6ZMW3 1958 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 A0A087WUJ7 227 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 A0A087WUU8 490 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 A0A0B4J2E0 115 aa4.54□□□□□ -1.68
VTI1B-202ENST00000553619 A0A1B0GWA3 101 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms