RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 KLHL13Q9P2N7 655 aa21.02■□□□□ 0.96
TDP1-205ENST00000553527 OSGIN1Q9UJX0 560 aa21.02■□□□□ 0.96
TDP1-205ENST00000553527 ABCA4P78363 2273 aa21.02■□□□□ 0.95
TDP1-205ENST00000553527 FAM221AA4D161 298 aa21.01■□□□□ 0.95
TDP1-205ENST00000553527 SMAD9O15198 467 aaKnown RBP21.01■□□□□ 0.95
TDP1-205ENST00000553527 GSTA4O15217 222 aa21.01■□□□□ 0.95
TDP1-205ENST00000553527 SERPINB7O75635 380 aa21.01■□□□□ 0.95
TDP1-205ENST00000553527 FESP07332 822 aa21.01■□□□□ 0.95
TDP1-205ENST00000553527 YES1P07947 543 aa21.01■□□□□ 0.95
TDP1-205ENST00000553527 PRG2P13727 222 aa21.01■□□□□ 0.95
TDP1-205ENST00000553527 SLC1A3P43003 542 aa21.01■□□□□ 0.95
TDP1-205ENST00000553527 HTR3AP46098 478 aa21.01■□□□□ 0.95
TDP1-205ENST00000553527 CSNK2A1P68400 391 aaPredicted RBP21.01■□□□□ 0.95
TDP1-205ENST00000553527 BNIP1Q12981 228 aa21.01■□□□□ 0.95
TDP1-205ENST00000553527 ARMC8Q8IUR7 673 aa21.01■□□□□ 0.95
TDP1-205ENST00000553527 RNF148Q8N7C7 305 aa21.01■□□□□ 0.95
TDP1-205ENST00000553527 ARMC7Q9H6L4 198 aa21.01■□□□□ 0.95
TDP1-205ENST00000553527 MYO9AB2RTY4 2548 aa21■□□□□ 0.95
TDP1-205ENST00000553527 TMEM72A0PK05 275 aa21■□□□□ 0.95
TDP1-205ENST00000553527 PRORSD1PA6NEY8 169 aa21■□□□□ 0.95
TDP1-205ENST00000553527 ACAA2P42765 397 aaKnown RBP21■□□□□ 0.95
TDP1-205ENST00000553527 OR2B6P58173 313 aa21■□□□□ 0.95
TDP1-205ENST00000553527 COPZ1P61923 177 aa21■□□□□ 0.95
TDP1-205ENST00000553527 RNF220Q5VTB9 566 aa21■□□□□ 0.95
TDP1-205ENST00000553527 BEND4Q6ZU67 534 aa21■□□□□ 0.95
TDP1-205ENST00000553527 TAS2R1Q9NYW7 299 aa21■□□□□ 0.95
TDP1-205ENST00000553527 ZKSCAN7Q9P0L1 754 aaPredicted RBP21■□□□□ 0.95
TDP1-205ENST00000553527 C6orf203Q9P0P8 240 aaPredicted RBP21■□□□□ 0.95
TDP1-205ENST00000553527 KLHL9Q9P2J3 617 aa21■□□□□ 0.95
TDP1-205ENST00000553527 CHST2Q9Y4C5 530 aa21■□□□□ 0.95
TDP1-205ENST00000553527 TESMINQ9Y4I5 508 aa21■□□□□ 0.95
TDP1-205ENST00000553527 HRNRQ86YZ3 2850 aaPredicted RBP20.99■□□□□ 0.95
TDP1-205ENST00000553527 FRS3O43559 492 aa20.99■□□□□ 0.95
TDP1-205ENST00000553527 OPN1SWP03999 348 aa20.99■□□□□ 0.95
TDP1-205ENST00000553527 CXCR1P25024 350 aa20.99■□□□□ 0.95
TDP1-205ENST00000553527 PRKAR1BP31321 381 aa20.99■□□□□ 0.95
TDP1-205ENST00000553527 CCKARP32238 428 aa20.99■□□□□ 0.95
TDP1-205ENST00000553527 HOXC5Q00444 222 aa20.99■□□□□ 0.95
TDP1-205ENST00000553527 ZSWIM7Q19AV6 140 aa20.99■□□□□ 0.95
TDP1-205ENST00000553527 DNAL1Q4LDG9 190 aa20.99■□□□□ 0.95
TDP1-205ENST00000553527 CCDC80Q76M96 950 aa20.99■□□□□ 0.95
TDP1-205ENST00000553527 DDIT4LQ96D03 193 aa20.99■□□□□ 0.95
TDP1-205ENST00000553527 ZNF300Q96RE9 604 aaPredicted RBP20.99■□□□□ 0.95
TDP1-205ENST00000553527 PSD2Q9BQI7 771 aa20.99■□□□□ 0.95
TDP1-205ENST00000553527 HDGFL3Q9Y3E1 203 aa20.99■□□□□ 0.95
TDP1-205ENST00000553527 FAAHO00519 579 aa20.98■□□□□ 0.95
TDP1-205ENST00000553527 EBAG9O00559 213 aa20.98■□□□□ 0.95
TDP1-205ENST00000553527 GYG2O15488 501 aa20.98■□□□□ 0.95
TDP1-205ENST00000553527 CYTIPO60759 359 aa20.98■□□□□ 0.95
TDP1-205ENST00000553527 ATP5HO75947 161 aa20.98■□□□□ 0.95
TDP1-205ENST00000553527 HSD17B1P14061 328 aa20.98■□□□□ 0.95
TDP1-205ENST00000553527 TCN1P20061 433 aaPredicted RBP20.98■□□□□ 0.95
TDP1-205ENST00000553527 FKBP2P26885 142 aaKnown RBP20.98■□□□□ 0.95
TDP1-205ENST00000553527 DNAJA1P31689 397 aaKnown RBP20.98■□□□□ 0.95
TDP1-205ENST00000553527 SPATS1Q496A3 300 aa20.98■□□□□ 0.95
TDP1-205ENST00000553527 LRRC23Q53EV4 343 aaPredicted RBP20.98■□□□□ 0.95
TDP1-205ENST00000553527 C22orf34Q6ZV56 151 aa20.98■□□□□ 0.95
TDP1-205ENST00000553527 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.98■□□□□ 0.95
TDP1-205ENST00000553527 ARHGAP24Q8N264 748 aa20.98■□□□□ 0.95
TDP1-205ENST00000553527 FAM156AQ8NDB6 213 aa20.98■□□□□ 0.95
TDP1-205ENST00000553527 BHLHE22Q8NFJ8 381 aaPredicted RBP20.98■□□□□ 0.95
TDP1-205ENST00000553527 SLC26A7Q8TE54 656 aa20.98■□□□□ 0.95
TDP1-205ENST00000553527 ZHX1-C8orf76Q96EF9 292 aa20.98■□□□□ 0.95
TDP1-205ENST00000553527 ZNF226Q9NYT6 803 aa20.98■□□□□ 0.95
TDP1-205ENST00000553527 ING1Q9UK53 422 aaPredicted RBP20.98■□□□□ 0.95
TDP1-205ENST00000553527 SLC13A4Q9UKG4 626 aa20.98■□□□□ 0.95
TDP1-205ENST00000553527 PRPF19Q9UMS4 504 aaKnown RBP20.98■□□□□ 0.95
TDP1-205ENST00000553527 ZC3H12DA2A288 527 aaKnown RBP20.97■□□□□ 0.95
TDP1-205ENST00000553527 M0QX08 132 aa20.97■□□□□ 0.95
TDP1-205ENST00000553527 CXCR6O00574 342 aa20.97■□□□□ 0.95
TDP1-205ENST00000553527 GCM2O75603 506 aaPredicted RBP20.97■□□□□ 0.95
TDP1-205ENST00000553527 MFN2O95140 757 aa20.97■□□□□ 0.95
TDP1-205ENST00000553527 PMS2P2O95744 297 aa20.97■□□□□ 0.95
TDP1-205ENST00000553527 RASSF2P50749 326 aa20.97■□□□□ 0.95
TDP1-205ENST00000553527 BNIP2Q12982 314 aa20.97■□□□□ 0.95
TDP1-205ENST00000553527 WBP2NLQ6ICG8 309 aa20.97■□□□□ 0.95
TDP1-205ENST00000553527 ALKBH2Q6NS38 261 aa20.97■□□□□ 0.95
TDP1-205ENST00000553527 DHRS4L2Q6PKH6 230 aa20.97■□□□□ 0.95
TDP1-205ENST00000553527 STAC2Q6ZMT1 411 aa20.97■□□□□ 0.95
TDP1-205ENST00000553527 CCDC121Q6ZUS5 278 aa20.97■□□□□ 0.95
TDP1-205ENST00000553527 CCDC103Q8IW40 242 aa20.97■□□□□ 0.95
TDP1-205ENST00000553527 SMYD1Q8NB12 490 aa20.97■□□□□ 0.95
TDP1-205ENST00000553527 TAMM41Q96BW9 452 aa20.97■□□□□ 0.95
TDP1-205ENST00000553527 SLC7A6OSQ96CW6 309 aaPredicted RBP20.97■□□□□ 0.95
TDP1-205ENST00000553527 ADAM19Q9H013 955 aa20.97■□□□□ 0.95
TDP1-205ENST00000553527 GP6Q9HCN6 339 aa20.97■□□□□ 0.95
TDP1-205ENST00000553527 FANCFQ9NPI8 374 aa20.97■□□□□ 0.95
TDP1-205ENST00000553527 CD300AQ9UGN4 299 aa20.97■□□□□ 0.95
TDP1-205ENST00000553527 EGFL7Q9UHF1 273 aa20.97■□□□□ 0.95
TDP1-205ENST00000553527 GMNNO75496 209 aa20.96■□□□□ 0.95
TDP1-205ENST00000553527 IFNA14P01570 189 aa20.96■□□□□ 0.95
TDP1-205ENST00000553527 HRGP04196 525 aa20.96■□□□□ 0.95
TDP1-205ENST00000553527 PCYT1AP49585 367 aa20.96■□□□□ 0.95
TDP1-205ENST00000553527 CLK1P49759 484 aaKnown RBP20.96■□□□□ 0.95
TDP1-205ENST00000553527 DMTNQ08495 405 aa20.96■□□□□ 0.95
TDP1-205ENST00000553527 CEACAM7Q14002 265 aa20.96■□□□□ 0.95
TDP1-205ENST00000553527 TSC22D1Q15714 1073 aa20.96■□□□□ 0.95
TDP1-205ENST00000553527 TFAP2EQ6VUC0 442 aa20.96■□□□□ 0.95
TDP1-205ENST00000553527 CXorf67Q86X51 503 aaPredicted RBP20.96■□□□□ 0.95
TDP1-205ENST00000553527 RASSF5Q8WWW0 418 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms