RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 NCLNQ969V3 563 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 NEURL3Q96EH8 262 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 FAM120BQ96EK7 910 aaKnown RBP5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 GIMAP5Q96F15 307 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 OR8D2Q9GZM6 311 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 CXorf36Q9H7Y0 433 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 ZNF160Q9HCG1 818 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 SLC6A13Q9NSD5 602 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 ARL8BQ9NVJ2 186 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 DDX18Q9NVP1 670 aaKnown RBP5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 GID8Q9NWU2 228 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 GIN1Q9NXP7 522 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 SLC25A37Q9NYZ2 338 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 PRODH2Q9UF12 536 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 TAGLN3Q9UI15 199 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 ZNF223Q9UK11 482 aaPredicted RBP5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 NPIPA1Q9UND3 350 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 ERVK-19Q9WJR5 959 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 CFL2Q9Y281 166 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 SNX8Q9Y5X2 465 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 KIAA1549Q9HCM3 1950 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 MALRD1Q5VYJ5 2156 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 RNF103-CHMP3A0A140T963 221 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 LINC01548A6NM66 108 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 M0QYG6 137 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 FXYD1O00168 92 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 CLIC1O00299 241 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 ZFAND5O76080 213 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 ANP32DO95626 131 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 KRT75O95678 551 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 WDPCPO95876 746 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 HMGN2P05204 90 aaKnown RBP5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 CELA2AP08217 269 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 KRT16P08779 473 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 CT45A8P0DMV1 189 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 CT45A9P0DMV2 189 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 T-ENOLP0DO92 83 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 DRD5P21918 477 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 PPIBP23284 216 aaKnown RBP5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 PPICP45877 212 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 PRIM2P49643 509 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 PSPHP78330 225 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 GAB1Q13480 694 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 EXOSC7Q15024 291 aaKnown RBP5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 DAZAP2Q15038 168 aaPredicted RBP5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 EBPQ15125 230 aaKnown RBP5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 CT45A2Q5DJT8 189 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 C8orf82Q6P1X6 216 aaPredicted RBP5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 ANKRD16Q6P6B7 361 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 SLC29A4Q7RTT9 530 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 C6orf120Q7Z4R8 191 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 DHDDSQ86SQ9 333 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 MSRB3Q8IXL7 192 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 C9orf40Q8IXQ3 194 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 ZNF321PQ8N8H1 164 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 CDRT4Q8N9R6 151 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 OR52R1Q8NGF1 315 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 OR5L2Q8NGL0 311 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 C16orf52Q8NHV5 167 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 ZFP90Q8TF47 636 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 ADIPOR1Q96A54 375 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 LRRC58Q96CX6 371 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 RCN3Q96D15 328 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 NSL1Q96IY1 281 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 VSTM2LQ96N03 204 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 ANKRD27Q96NW4 1050 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 MS4A4EQ96PG1 132 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 BTBD9Q96Q07 612 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 STACQ99469 402 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 NPAS2Q99743 824 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 HOPXQ9BPY8 73 aaPredicted RBP5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 SLC35A5Q9BS91 424 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 LMF2Q9BU23 707 aaKnown RBP5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 C1orf21Q9H246 121 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 RAD21L1Q9H4I0 556 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 ANKRA2Q9H9E1 313 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 TPT1P8Q9HAU6 139 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 ZCCHC3Q9NUD5 404 aaKnown RBP5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 VAPAQ9P0L0 249 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 BCAP29Q9UHQ4 241 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 CORO2BQ9UQ03 480 aa5.82□□□□□ -1.48
DEPDC4-210ENST00000551642 NUP214P35658 2090 aaPredicted RBP5.81□□□□□ -1.48
DEPDC4-210ENST00000551642 C15orf38-AP3S2A0A0A6YYH1 394 aa5.81□□□□□ -1.48
DEPDC4-210ENST00000551642 TRBV11-1A0A0K0K1C0 115 aa5.81□□□□□ -1.48
DEPDC4-210ENST00000551642 C2orf92A0A1B0GVN3 265 aa5.81□□□□□ -1.48
DEPDC4-210ENST00000551642 FRG2CA6NGY1 282 aa5.81□□□□□ -1.48
DEPDC4-210ENST00000551642 DUXAA6NLW8 204 aa5.81□□□□□ -1.48
DEPDC4-210ENST00000551642 EVPLLA8MZ36 301 aa5.81□□□□□ -1.48
DEPDC4-210ENST00000551642 AIM2O14862 343 aa5.81□□□□□ -1.48
DEPDC4-210ENST00000551642 ACOX3O15254 700 aa5.81□□□□□ -1.48
DEPDC4-210ENST00000551642 ASNA1O43681 348 aa5.81□□□□□ -1.48
DEPDC4-210ENST00000551642 HNRNPCL1O60812 293 aaKnown RBP5.81□□□□□ -1.48
DEPDC4-210ENST00000551642 ATP5HO75947 161 aa5.81□□□□□ -1.48
DEPDC4-210ENST00000551642 NKX2-2O95096 273 aa5.81□□□□□ -1.48
DEPDC4-210ENST00000551642 AGR2O95994 175 aa5.81□□□□□ -1.48
DEPDC4-210ENST00000551642 GPX2P18283 190 aa5.81□□□□□ -1.48
DEPDC4-210ENST00000551642 MATN1P21941 496 aa5.81□□□□□ -1.48
DEPDC4-210ENST00000551642 SOAT1P35610 550 aa5.81□□□□□ -1.48
DEPDC4-210ENST00000551642 CHI3L1P36222 383 aaPredicted RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms