RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 ALG6Q9Y672 507 aa2.39□□□□□ -2.03
GPN3-209ENST00000551079 CLCA3PQ9Y6N3 262 aa2.39□□□□□ -2.03
GPN3-209ENST00000551079 BRWD3Q6RI45 1802 aa2.39□□□□□ -2.03
GPN3-209ENST00000551079 FRMPD4Q14CM0 1322 aa2.39□□□□□ -2.03
GPN3-209ENST00000551079 GPRASP1Q5JY77 1395 aa2.38□□□□□ -2.03
GPN3-209ENST00000551079 KRT87PA6NCN2 255 aa2.38□□□□□ -2.03
GPN3-209ENST00000551079 VSTM2BA6NLU5 285 aa2.38□□□□□ -2.03
GPN3-209ENST00000551079 AGPAT2O15120 278 aa2.38□□□□□ -2.03
GPN3-209ENST00000551079 MSH4O15457 936 aa2.38□□□□□ -2.03
GPN3-209ENST00000551079 RBBP9O75884 186 aa2.38□□□□□ -2.03
GPN3-209ENST00000551079 PTBP3O95758 552 aaKnown RBP2.38□□□□□ -2.03
GPN3-209ENST00000551079 C6orf47O95873 294 aa2.38□□□□□ -2.03
GPN3-209ENST00000551079 ADRA1AP35348 466 aa2.38□□□□□ -2.03
GPN3-209ENST00000551079 EFNB2P52799 333 aa2.38□□□□□ -2.03
GPN3-209ENST00000551079 ABCA11PQ4W5N1 156 aa2.38□□□□□ -2.03
GPN3-209ENST00000551079 ZNF836Q6ZNA1 936 aa2.38□□□□□ -2.03
GPN3-209ENST00000551079 CATSPER4Q7RTX7 472 aa2.38□□□□□ -2.03
GPN3-209ENST00000551079 PCP2Q8IVA1 136 aa2.38□□□□□ -2.03
GPN3-209ENST00000551079 RDH10Q8IZV5 341 aa2.38□□□□□ -2.03
GPN3-209ENST00000551079 ARL10Q8N8L6 244 aa2.38□□□□□ -2.03
GPN3-209ENST00000551079 FRZBQ92765 325 aa2.38□□□□□ -2.03
GPN3-209ENST00000551079 EXOSC8Q96B26 276 aaKnown RBP2.38□□□□□ -2.03
GPN3-209ENST00000551079 FCRL1Q96LA6 429 aa2.38□□□□□ -2.03
GPN3-209ENST00000551079 LINC00477Q96M19 166 aa2.38□□□□□ -2.03
GPN3-209ENST00000551079 NPAS2Q99743 824 aa2.38□□□□□ -2.03
GPN3-209ENST00000551079 C20orf85Q9H1P6 137 aa2.38□□□□□ -2.03
GPN3-209ENST00000551079 CDC42EP4Q9H3Q1 356 aaKnown RBP2.38□□□□□ -2.03
GPN3-209ENST00000551079 OPN4Q9UHM6 478 aa2.38□□□□□ -2.03
GPN3-209ENST00000551079 B9D1Q9UPM9 204 aa2.38□□□□□ -2.03
GPN3-209ENST00000551079 TRAF3IP3Q9Y228 551 aa2.38□□□□□ -2.03
GPN3-209ENST00000551079 MROH7-TTC4A0A0A0MT08 1334 aa2.38□□□□□ -2.03
GPN3-209ENST00000551079 IGLV11-55A0A075B6I3 123 aa2.37□□□□□ -2.03
GPN3-209ENST00000551079 CLDN5O00501 218 aa2.37□□□□□ -2.03
GPN3-209ENST00000551079 SDHDO14521 159 aa2.37□□□□□ -2.03
GPN3-209ENST00000551079 PRPSAP2O60256 369 aa2.37□□□□□ -2.03
GPN3-209ENST00000551079 TPST2O60704 377 aa2.37□□□□□ -2.03
GPN3-209ENST00000551079 OR4F21O95013 312 aa2.37□□□□□ -2.03
GPN3-209ENST00000551079 POU2F1P14859 743 aa2.37□□□□□ -2.03
GPN3-209ENST00000551079 TBXA2RP21731 343 aa2.37□□□□□ -2.03
GPN3-209ENST00000551079 CXCR2P25025 360 aa2.37□□□□□ -2.03
GPN3-209ENST00000551079 FGF9P31371 208 aaPredicted RBP2.37□□□□□ -2.03
GPN3-209ENST00000551079 SLC26A3P40879 764 aa2.37□□□□□ -2.03
GPN3-209ENST00000551079 GLP1RP43220 463 aa2.37□□□□□ -2.03
GPN3-209ENST00000551079 GMFBP60983 142 aa2.37□□□□□ -2.03
GPN3-209ENST00000551079 SNTB2Q13425 540 aaKnown RBP2.37□□□□□ -2.03
GPN3-209ENST00000551079 UBE2SQ16763 222 aa2.37□□□□□ -2.03
GPN3-209ENST00000551079 TIGD3Q6B0B8 471 aa2.37□□□□□ -2.03
GPN3-209ENST00000551079 ZSCAN25Q6NSZ9 544 aa2.37□□□□□ -2.03
GPN3-209ENST00000551079 SLC25A34Q6PIV7 304 aa2.37□□□□□ -2.03
GPN3-209ENST00000551079 CNSTQ6PJW8 725 aa2.37□□□□□ -2.03
GPN3-209ENST00000551079 PRSS41Q7RTY9 318 aa2.37□□□□□ -2.03
GPN3-209ENST00000551079 DPY19L4Q7Z388 723 aa2.37□□□□□ -2.03
GPN3-209ENST00000551079 ZNF571Q7Z3V5 609 aaPredicted RBP2.37□□□□□ -2.03
GPN3-209ENST00000551079 ERASQ7Z444 233 aa2.37□□□□□ -2.03
GPN3-209ENST00000551079 ZNF709Q8N972 641 aa2.37□□□□□ -2.03
GPN3-209ENST00000551079 OR9G1Q8NH87 305 aa2.37□□□□□ -2.03
GPN3-209ENST00000551079 TAAR1Q96RJ0 339 aa2.37□□□□□ -2.03
GPN3-209ENST00000551079 SLC35A5Q9BS91 424 aa2.37□□□□□ -2.03
GPN3-209ENST00000551079 ZNF2Q9BSG1 426 aaPredicted RBP2.37□□□□□ -2.03
GPN3-209ENST00000551079 MRPL13Q9BYD1 178 aaKnown RBP2.37□□□□□ -2.03
GPN3-209ENST00000551079 RHBGQ9H310 441 aa2.37□□□□□ -2.03
GPN3-209ENST00000551079 FOLH1BQ9HBA9 442 aa2.37□□□□□ -2.03
GPN3-209ENST00000551079 HOOK1Q9UJC3 728 aaKnown RBP2.37□□□□□ -2.03
GPN3-209ENST00000551079 IGKV1D-8A0A087WSZ0 117 aa2.36□□□□□ -2.03
GPN3-209ENST00000551079 F8WDY8 70 aa2.36□□□□□ -2.03
GPN3-209ENST00000551079 CHADO15335 359 aa2.36□□□□□ -2.03
GPN3-209ENST00000551079 ANGPTL7O43827 346 aa2.36□□□□□ -2.03
GPN3-209ENST00000551079 CTDNEP1O95476 244 aa2.36□□□□□ -2.03
GPN3-209ENST00000551079 TPSB2P20231 275 aa2.36□□□□□ -2.03
GPN3-209ENST00000551079 MAPK3P27361 379 aaPredicted RBP2.36□□□□□ -2.03
GPN3-209ENST00000551079 SHMT2P34897 504 aa2.36□□□□□ -2.03
GPN3-209ENST00000551079 VDAC2P45880 294 aaPredicted RBP2.36□□□□□ -2.03
GPN3-209ENST00000551079 CAMLGP49069 296 aa2.36□□□□□ -2.03
GPN3-209ENST00000551079 HSD17B7P56937 341 aa2.36□□□□□ -2.03
GPN3-209ENST00000551079 EWSR1Q01844 656 aaKnown RBP eCLIP2.36□□□□□ -2.03
GPN3-209ENST00000551079 ENPEPQ07075 957 aa2.36□□□□□ -2.03
GPN3-209ENST00000551079 PDZK1IP1Q13113 114 aa2.36□□□□□ -2.03
GPN3-209ENST00000551079 TPSAB1Q15661 275 aa2.36□□□□□ -2.03
GPN3-209ENST00000551079 TRIM16LQ309B1 348 aa2.36□□□□□ -2.03
GPN3-209ENST00000551079 LY6G6FQ5SQ64 297 aa2.36□□□□□ -2.03
GPN3-209ENST00000551079 HMGN2P46Q86SG4 172 aa2.36□□□□□ -2.03
GPN3-209ENST00000551079 Q8N976 141 aa2.36□□□□□ -2.03
GPN3-209ENST00000551079 OR10G9Q8NGN4 311 aa2.36□□□□□ -2.03
GPN3-209ENST00000551079 DTX3LQ8TDB6 740 aa2.36□□□□□ -2.03
GPN3-209ENST00000551079 ASB9Q96DX5 294 aa2.36□□□□□ -2.03
GPN3-209ENST00000551079 KRT23Q9C075 422 aa2.36□□□□□ -2.03
GPN3-209ENST00000551079 POLR1EQ9GZS1 481 aaKnown RBP2.36□□□□□ -2.03
GPN3-209ENST00000551079 CCL28Q9NRJ3 127 aa2.36□□□□□ -2.03
GPN3-209ENST00000551079 ZNF226Q9NYT6 803 aa2.36□□□□□ -2.03
GPN3-209ENST00000551079 TBK1Q9UHD2 729 aa2.36□□□□□ -2.03
GPN3-209ENST00000551079 YTHDF2Q9Y5A9 579 aaKnown RBP2.36□□□□□ -2.03
GPN3-209ENST00000551079 LANCL1O43813 399 aa2.35□□□□□ -2.03
GPN3-209ENST00000551079 CA1P00915 261 aaPredicted RBP2.35□□□□□ -2.03
GPN3-209ENST00000551079 RHOXF2BP0C7M4 288 aa2.35□□□□□ -2.03
GPN3-209ENST00000551079 ZNF14P17017 642 aaPredicted RBP2.35□□□□□ -2.03
GPN3-209ENST00000551079 FMO3P31513 532 aa2.35□□□□□ -2.03
GPN3-209ENST00000551079 RFC4P35249 363 aa2.35□□□□□ -2.03
GPN3-209ENST00000551079 DAP3P51398 398 aaKnown RBP2.35□□□□□ -2.03
GPN3-209ENST00000551079 IL1RL1Q01638 556 aa2.35□□□□□ -2.03
GPN3-209ENST00000551079 ATP6AP1Q15904 470 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms