RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, human

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-223	ENST00000550442	ZNF649	Q9BS31	505 aa		10.84	□□□□□ -0.67
LETMD1-223	ENST00000550442	TTYH2	Q9BSA4	534 aa		10.84	□□□□□ -0.67
LETMD1-223	ENST00000550442	DPH1	Q9BZG8	443 aa		10.84	□□□□□ -0.67
LETMD1-223	ENST00000550442	LAT2	Q9GZY6	243 aa		10.84	□□□□□ -0.67
LETMD1-223	ENST00000550442	CD93	Q9NPY3	652 aa		10.84	□□□□□ -0.67
LETMD1-223	ENST00000550442	CTPS2	Q9NRF8	586 aa		10.84	□□□□□ -0.67
LETMD1-223	ENST00000550442	ABCB10	Q9NRK6	738 aa		10.84	□□□□□ -0.67
LETMD1-223	ENST00000550442	SNTG1	Q9NSN8	517 aa		10.84	□□□□□ -0.67
LETMD1-223	ENST00000550442	CUTC	Q9NTM9	273 aa		10.84	□□□□□ -0.67
LETMD1-223	ENST00000550442	IRAK4	Q9NWZ3	460 aa		10.84	□□□□□ -0.67
LETMD1-223	ENST00000550442	CABIN1	Q9Y6J0	2220 aa		10.84	□□□□□ -0.67
LETMD1-223	ENST00000550442	SPTAN1	Q13813	2472 aa	Known RBP	10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	MYO9A	B2RTY4	2548 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	hCG_2014768	A0A024R1R8	64 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	TRAV1-2	A0A0B4J238	106 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	FABP12	A6NFH5	140 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	CASK	O14936	926 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	PLD2	O14939	933 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	TBX1	O43435	398 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	TLX3	O43711	291 aa	Predicted RBP	10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	OR2B3	O76000	313 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	IFNA16	P05015	189 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	TACSTD2	P09758	323 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	ZGLP1	P0C6A0	271 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	MAK	P20794	623 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	GRK6	P43250	576 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	ARRB1	P49407	418 aa	Predicted RBP	10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	NRG3	P56975	720 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	ASAH1	Q13510	395 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	PERM1	Q5SV97	790 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	SLC6A19	Q695T7	634 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	MZT2B	Q6NZ67	158 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	PLBD1	Q6P4A8	553 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	BAIAP2L2	Q6UXY1	529 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	PRSS41	Q7RTY9	318 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	TMPRSS12	Q86WS5	348 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	CACTIN-AS1	Q8N1I8	211 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	BCORP1	Q8N888	145 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	PLPP5	Q8NEB5	264 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	OR6S1	Q8NH40	331 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	TM9SF4	Q92544	642 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	CNOT9	Q92600	299 aa	Known RBP	10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	SLC41A2	Q96JW4	573 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	KATNB1	Q9BVA0	655 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	ALG8	Q9BVK2	526 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	TGIF2	Q9GZN2	237 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	SLC22A4	Q9H015	551 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	RHBDL2	Q9NX52	303 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	TAS2R16	Q9NYV7	291 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	COPS7A	Q9UBW8	275 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	PAIP2B	Q9ULR5	123 aa	Known RBP	10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	CLCA3P	Q9Y6N3	262 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	TEX15	Q9BXT5	2789 aa		10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	10.83	□□□□□ -0.68
LETMD1-223	ENST00000550442	MGA	Q8IWI9	3026 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	ATM	Q13315	3056 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	COL5A1	P20908	1838 aa	Predicted RBP	10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	TEP1	Q99973	2627 aa	Known RBP	10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	IGKV3D-11	A0A0A0MRZ8	115 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	C12orf71	A8MTZ7	269 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	C17orf105	B2RV13	164 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	PHYH	O14832	338 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	ZNF264	O43296	627 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	RNF13	O43567	381 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	CDC40	O60508	579 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	DNAJB6	O75190	326 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	TRIM3	O75382	744 aa	Predicted RBP	10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	ITGA10	O75578	1167 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	PIAS2	O75928	621 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	OR7A10	O76100	309 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	TXNDC12	O95881	172 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	MT-ATP6	P00846	226 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	HLA-DQB1	P01920	261 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	GKN3P	P0CG01	181 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	CEL	P19835	753 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	SLC2A5	P22732	501 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	MYL9	P24844	172 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	TALDO1	P37837	337 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	HTR3A	P46098	478 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	PSMD7	P51665	324 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	GBX2	P52951	348 aa	Predicted RBP	10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	PNLIPRP2	P54317	469 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	MAZ	P56270	477 aa	Known RBP	10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	SLC37A1	P57057	533 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	RPS4X	P62701	263 aa	Known RBP	10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	IFITM3	Q01628	133 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	ID2	Q02363	134 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	ACY1	Q03154	408 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	MFSD13A	Q14CX5	517 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	GLYR1	Q49A26	553 aa	Predicted RBP	10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	HLA-DQA1	Q5Y7H0	255 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	C22orf42	Q6IC83	251 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	ZNF544	Q6NX49	715 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	RPL22L1	Q6P5R6	122 aa	Known RBP	10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	LHFPL3	Q86UP9	236 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	TMEM151B	Q8IW70	566 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	OR5W2	Q8NH69	310 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	SNIP1	Q8TAD8	396 aa	Known RBP	10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	NEIL3	Q8TAT5	605 aa		10.82	□□□□□ -0.68
LETMD1-223	ENST00000550442	C15orf40	Q8WUR7	153 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms