RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 CHST2Q9Y4C5 530 aa11.98□□□□□ -0.49
NUP188-211ENST00000550219 ABCA4P78363 2273 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 SERINC4A6NH21 518 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 H7C1Q1 480 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 SMAD7O15105 426 aaKnown RBP11.97□□□□□ -0.49
NUP188-211ENST00000550219 SS18L1O75177 396 aaPredicted RBP11.97□□□□□ -0.49
NUP188-211ENST00000550219 GMNNO75496 209 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 NUDT14O95848 222 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 IFNA14P01570 189 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 NID1P14543 1247 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 CD247P20963 164 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 ATP6V1B2P21281 511 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 PCYT1AP49585 367 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 FOXF1Q12946 379 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 LARS2Q15031 903 aaKnown RBP11.97□□□□□ -0.49
NUP188-211ENST00000550219 ZSWIM7Q19AV6 140 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 CTU2Q2VPK5 515 aaKnown RBP11.97□□□□□ -0.49
NUP188-211ENST00000550219 LIN52Q52LA3 116 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 MTX3Q5HYI7 312 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 PDZK1Q5T2W1 519 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 RNF220Q5VTB9 566 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 C22orf34Q6ZV56 151 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 CBLL1Q75N03 491 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 EIF3MQ7L2H7 374 aaKnown RBP11.97□□□□□ -0.49
NUP188-211ENST00000550219 DHFR2Q86XF0 187 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 VRK2Q86Y07 508 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 WFDC8Q8IUA0 241 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 ARMC8Q8IUR7 673 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 CMIPQ8IY22 773 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 ZNF614Q8N883 585 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 BHLHE22Q8NFJ8 381 aaPredicted RBP11.97□□□□□ -0.49
NUP188-211ENST00000550219 GPR32P1Q8NGA4 272 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 B4GALNT2Q8NHY0 566 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 PHOSPHO1Q8TCT1 267 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 RASSF5Q8WWW0 418 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 ZBTB8AQ96BR9 441 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 GMPPAQ96IJ6 420 aaPredicted RBP11.97□□□□□ -0.49
NUP188-211ENST00000550219 ADGRG7Q96K78 797 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 KLHL15Q96M94 604 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 NSMCE2Q96MF7 247 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 RAB3IPQ96QF0 476 aaPredicted RBP11.97□□□□□ -0.49
NUP188-211ENST00000550219 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.97□□□□□ -0.49
NUP188-211ENST00000550219 ZNF232Q9UNY5 417 aa11.97□□□□□ -0.49
NUP188-211ENST00000550219 ZNF443Q9Y2A4 671 aaPredicted RBP11.97□□□□□ -0.49
NUP188-211ENST00000550219 A0A0J9YW62 118 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.96□□□□□ -0.49
NUP188-211ENST00000550219 TCRBV5S2A0A599 114 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 AQP12BA6NM10 295 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 TPST1O60507 370 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 LGI1O95970 557 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 SERPINA1P01009 418 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 C8BP07358 591 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 IL7RP16871 459 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 IL11P20809 199 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 SHC1P29353 583 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 RAC1P63000 192 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 SELENOWP63302 87 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 KCNJ10P78508 379 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 PLAURQ03405 335 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 ZNF117Q03924 483 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 DUSP7Q16829 419 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 LRRC23Q53EV4 343 aaPredicted RBP11.96□□□□□ -0.49
NUP188-211ENST00000550219 CYBRD1Q53TN4 286 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 ZNF311Q5JNZ3 666 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 PDSS1Q5T2R2 415 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 C20orf204Q6ZNR8 217 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 ESPNLQ6ZVH7 1005 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 HMGN2P46Q86SG4 172 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 MISPQ8IVT2 679 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 AQP12AQ8IXF9 295 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 LRRC75A-AS1Q8N1F1 130 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 CIARTQ8N365 385 aaPredicted RBP11.96□□□□□ -0.49
NUP188-211ENST00000550219 TMCO5AQ8N6Q1 288 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 FAM71CQ8NEG0 241 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 POC1BQ8TC44 478 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 WDR60Q8WVS4 1066 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 ROBO4Q8WZ75 1007 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 SLC35B4Q969S0 331 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 FAM162AQ96A26 154 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 PIP5K1AQ99755 562 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 ACTR6Q9GZN1 396 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 HHATLQ9HCP6 504 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 PAQR5Q9NXK6 330 aaPredicted RBP11.96□□□□□ -0.49
NUP188-211ENST00000550219 SLC35A3Q9Y2D2 325 aa11.96□□□□□ -0.49
NUP188-211ENST00000550219 ZNF469Q96JG9 3925 aaPredicted RBP11.96□□□□□ -0.5
NUP188-211ENST00000550219 ZFHX3Q15911 3703 aa11.95□□□□□ -0.5
NUP188-211ENST00000550219 C7orf72A4D263 438 aa11.95□□□□□ -0.5
NUP188-211ENST00000550219 CDHR4A6H8M9 788 aa11.95□□□□□ -0.5
NUP188-211ENST00000550219 CLDN24A6NM45 220 aa11.95□□□□□ -0.5
NUP188-211ENST00000550219 H3BNH8 94 aa11.95□□□□□ -0.5
NUP188-211ENST00000550219 OIP5O43482 229 aa11.95□□□□□ -0.5
NUP188-211ENST00000550219 BCAS1O75363 584 aaPredicted RBP11.95□□□□□ -0.5
NUP188-211ENST00000550219 OPN1SWP03999 348 aa11.95□□□□□ -0.5
NUP188-211ENST00000550219 THBDP07204 575 aa11.95□□□□□ -0.5
NUP188-211ENST00000550219 PSMA4P25789 261 aaKnown RBP11.95□□□□□ -0.5
NUP188-211ENST00000550219 LOXP28300 417 aaPredicted RBP11.95□□□□□ -0.5
NUP188-211ENST00000550219 AGTR1P30556 359 aa11.95□□□□□ -0.5
NUP188-211ENST00000550219 CCR4P51679 360 aa11.95□□□□□ -0.5
NUP188-211ENST00000550219 FLOT2Q14254 428 aa11.95□□□□□ -0.5
NUP188-211ENST00000550219 NDUFAF6Q330K2 333 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms