RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 HIVEP2P31629 2446 aa11.82□□□□□ -0.52
GCN1-206ENST00000549815 CR1P17927 2039 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 A0A1W2PP18 115 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 ABCD4O14678 606 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 UBDO15205 165 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 BCHEP06276 602 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 GKN3PP0CG01 181 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 CRATP43155 626 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 MRPL19P49406 292 aaKnown RBP11.81□□□□□ -0.52
GCN1-206ENST00000549815 P2RY4P51582 365 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 POLR2JP52435 117 aaKnown RBP11.81□□□□□ -0.52
GCN1-206ENST00000549815 CRISP3P54108 245 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 DSTNP60981 165 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 FAPQ12884 760 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 CLEC12BQ2HXU8 276 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 LIN52Q52LA3 116 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 RPS26P11Q5JNZ5 115 aaPredicted RBP11.81□□□□□ -0.52
GCN1-206ENST00000549815 RNF220Q5VTB9 566 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 EPGNQ6UW88 154 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 ZNF440Q8IYI8 595 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 UBE2J2Q8N2K1 259 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 CLIP4Q8N3C7 705 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 ZIC4Q8N9L1 334 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 OR52N5Q8NH56 324 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 GTF2H4Q92759 462 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 TMEM45BQ96B21 275 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 TRMT61AQ96FX7 289 aaKnown RBP11.81□□□□□ -0.52
GCN1-206ENST00000549815 TMEM19Q96HH6 336 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 NAA11Q9BSU3 229 aaPredicted RBP11.81□□□□□ -0.52
GCN1-206ENST00000549815 PAIP1Q9H074 479 aaKnown RBP11.81□□□□□ -0.52
GCN1-206ENST00000549815 NKIRAS1Q9NYS0 192 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 CALML5Q9NZT1 146 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 ZNF443Q9Y2A4 671 aaPredicted RBP11.81□□□□□ -0.52
GCN1-206ENST00000549815 SLC9A8Q9Y2E8 581 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 JMJD1CQ15652 2540 aa11.81□□□□□ -0.52
GCN1-206ENST00000549815 CUBNO60494 3623 aa11.8□□□□□ -0.52
GCN1-206ENST00000549815 A0A1W2PR80 420 aa11.8□□□□□ -0.52
GCN1-206ENST00000549815 FAM234BA2RU67 622 aa11.8□□□□□ -0.52
GCN1-206ENST00000549815 LIPT2A6NK58 231 aa11.8□□□□□ -0.52
GCN1-206ENST00000549815 NPIPB7O75200 414 aa11.8□□□□□ -0.52
GCN1-206ENST00000549815 NDUFS7O75251 213 aa11.8□□□□□ -0.52
GCN1-206ENST00000549815 IGHV4-39P01824 125 aa11.8□□□□□ -0.52
GCN1-206ENST00000549815 NUDT7P0C024 238 aa11.8□□□□□ -0.52
GCN1-206ENST00000549815 BMP2P12643 396 aa11.8□□□□□ -0.52
GCN1-206ENST00000549815 UQCRBP14927 111 aa11.8□□□□□ -0.52
GCN1-206ENST00000549815 CDH11P55287 796 aa11.8□□□□□ -0.52
GCN1-206ENST00000549815 SPOCK1Q08629 439 aa11.8□□□□□ -0.52
GCN1-206ENST00000549815 ETFDHQ16134 617 aa11.8□□□□□ -0.52
GCN1-206ENST00000549815 TSPO2Q5TGU0 170 aa11.8□□□□□ -0.52
GCN1-206ENST00000549815 CASP12Q6UXS9 341 aa11.8□□□□□ -0.52
GCN1-206ENST00000549815 PRIMA1Q86XR5 153 aa11.8□□□□□ -0.52
GCN1-206ENST00000549815 TMEM99Q8N816 258 aa11.8□□□□□ -0.52
GCN1-206ENST00000549815 WDR31Q8NA23 367 aa11.8□□□□□ -0.52
GCN1-206ENST00000549815 ITCHQ96J02 903 aa11.8□□□□□ -0.52
GCN1-206ENST00000549815 SF3B5Q9BWJ5 86 aaKnown RBP11.8□□□□□ -0.52
GCN1-206ENST00000549815 RSPO3Q9BXY4 272 aaPredicted RBP11.8□□□□□ -0.52
GCN1-206ENST00000549815 SLCO5A1Q9H2Y9 848 aa11.8□□□□□ -0.52
GCN1-206ENST00000549815 RMND5AQ9H871 391 aa11.8□□□□□ -0.52
GCN1-206ENST00000549815 SLC7A10Q9NS82 523 aa11.8□□□□□ -0.52
GCN1-206ENST00000549815 DCTN4Q9UJW0 460 aa11.8□□□□□ -0.52
GCN1-206ENST00000549815 PCDHB14Q9Y5E9 798 aa11.8□□□□□ -0.52
GCN1-206ENST00000549815 USH1CQ9Y6N9 552 aa11.8□□□□□ -0.52
GCN1-206ENST00000549815 A0A0G2JPF8 293 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 CIB4A0PJX0 185 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 AQP7P3A6NL99 342 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 CCT8L1PA6NM43 557 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 TMEM229AB2RXF0 380 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 HNRNPCL2B2RXH8 293 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 HNRNPCL3B7ZW38 293 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 INAFM1C9JVW0 142 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 E7EQL1 145 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 HNRNPCL1O60812 293 aaKnown RBP11.79□□□□□ -0.52
GCN1-206ENST00000549815 ANP32DO95626 131 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 HNRNPCL4P0DMR1 293 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 PRG2P13727 222 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 CD40P25942 277 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 PCSK6P29122 969 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 IDUAP35475 653 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 ACVR1BP36896 505 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 ZNF83P51522 516 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 SLC25A3Q00325 362 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 BNIP2Q12982 314 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 CEACAM7Q14002 265 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 RGNQ15493 299 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 OR7A5Q15622 319 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 ZSWIM7Q19AV6 140 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 OTUD3Q5T2D3 398 aaPredicted RBP11.79□□□□□ -0.52
GCN1-206ENST00000549815 WBP2NLQ6ICG8 309 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 OR7E24Q6IFN5 339 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 C11orf71Q6IPW1 123 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 SLC2A7Q6PXP3 512 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 TMEM108Q6UXF1 575 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 B3GLCTQ6Y288 498 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 SERPINA11Q86U17 422 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 FUNDC1Q8IVP5 155 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 MIER2Q8N344 545 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 OR9K2Q8NGE7 335 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 GTPBP3Q969Y2 492 aaKnown RBP11.79□□□□□ -0.52
GCN1-206ENST00000549815 C3orf49Q96BT1 292 aa11.79□□□□□ -0.52
GCN1-206ENST00000549815 BOD1Q96IK1 185 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms