RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 EIF1BO60739 113 aaKnown RBP15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 KRT75O95678 551 aa15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 IDO1P14902 403 aa15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 UQCRBP14927 111 aa15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 IL7RP16871 459 aa15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 PTNP21246 168 aa15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 CD40P25942 277 aa15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 MAP2K6P52564 334 aa15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 SLC25A3Q00325 362 aa15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 SLC17A1Q14916 467 aa15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 PAQR6Q6TCH4 344 aa15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 ZNF836Q6ZNA1 936 aa15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 MAVSQ7Z434 540 aa15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 MGARPQ8TDB4 240 aa15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 HS6ST2Q96MM7 605 aa15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 MUS81Q96NY9 551 aa15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 ADAM19Q9H013 955 aa15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 MTHFD2LQ9H903 347 aaPredicted RBP15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 BARX1Q9HBU1 254 aaPredicted RBP15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 SLC7A10Q9NS82 523 aa15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 RLIMQ9NVW2 624 aa15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 P2RX2Q9UBL9 471 aa15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 MGAT4BQ9UQ53 548 aa15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 B3GALT5Q9Y2C3 310 aa15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 ALPK2Q86TB3 2170 aa15.28■□□□□ 0.04
CHMP1A-205ENST00000548650 KITP10721 976 aa15.27■□□□□ 0.04
CHMP1A-205ENST00000548650 ETFAP13804 333 aa15.27■□□□□ 0.04
CHMP1A-205ENST00000548650 PTAFRP25105 342 aa15.27■□□□□ 0.04
CHMP1A-205ENST00000548650 NRF1Q16656 503 aa15.27■□□□□ 0.04
CHMP1A-205ENST00000548650 GTDC1Q4AE62 458 aa15.27■□□□□ 0.04
CHMP1A-205ENST00000548650 LIN52Q52LA3 116 aa15.27■□□□□ 0.04
CHMP1A-205ENST00000548650 AGAP6Q5VW22 663 aa15.27■□□□□ 0.04
CHMP1A-205ENST00000548650 OR7E24Q6IFN5 339 aa15.27■□□□□ 0.04
CHMP1A-205ENST00000548650 KLHL17Q6TDP4 642 aa15.27■□□□□ 0.04
CHMP1A-205ENST00000548650 VRK2Q86Y07 508 aa15.27■□□□□ 0.04
CHMP1A-205ENST00000548650 PEX5LQ8IYB4 626 aa15.27■□□□□ 0.04
CHMP1A-205ENST00000548650 ZNF440Q8IYI8 595 aa15.27■□□□□ 0.04
CHMP1A-205ENST00000548650 C17orf78Q8N4C9 275 aa15.27■□□□□ 0.04
CHMP1A-205ENST00000548650 C1orf162Q8NEQ5 155 aaPredicted RBP15.27■□□□□ 0.04
CHMP1A-205ENST00000548650 TMEM45BQ96B21 275 aa15.27■□□□□ 0.04
CHMP1A-205ENST00000548650 MDFIQ99750 246 aa15.27■□□□□ 0.04
CHMP1A-205ENST00000548650 NAA11Q9BSU3 229 aaPredicted RBP15.27■□□□□ 0.04
CHMP1A-205ENST00000548650 DCTN4Q9UJW0 460 aa15.27■□□□□ 0.04
CHMP1A-205ENST00000548650 COL6A5A8TX70 2615 aa15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 LIPT2A6NK58 231 aa15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 M0R1B8 84 aa15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 CRLF1O75462 422 aa15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 SLC22A3O75751 556 aa15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 IL6P05231 212 aa15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 BCHEP06276 602 aa15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 GKN3PP0CG01 181 aa15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 ZCCHC18P0CG32 403 aa15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 TTKP33981 857 aa15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 ACAA2P42765 397 aaKnown RBP15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 IRX1P78414 480 aaPredicted RBP15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 SLC9B1Q4ZJI4 515 aa15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 RPS26P11Q5JNZ5 115 aaPredicted RBP15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 OTUD3Q5T2D3 398 aaPredicted RBP15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 TSPO2Q5TGU0 170 aa15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 RNF220Q5VTB9 566 aa15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 C9orf135Q5VTT2 229 aa15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 NXNQ6DKJ4 435 aa15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 SLC22A25Q6T423 547 aa15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 WDR31Q8NA23 367 aa15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 OR52P1PQ8NH57 321 aa15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 AURKBQ96GD4 344 aaPredicted RBP15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 DHRS9Q9BPW9 319 aa15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 CACNG6Q9BXT2 260 aa15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 SDR39U1Q9NRG7 319 aaPredicted RBP15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 CBLN4Q9NTU7 201 aa15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 ZNF443Q9Y2A4 671 aaPredicted RBP15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 CHST2Q9Y4C5 530 aa15.26■□□□□ 0.03
CHMP1A-205ENST00000548650 ARFGEF3Q5TH69 2177 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 A0A096LNT2 108 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 AQP7P3A6NL99 342 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 SLCO1B7G3V0H7 640 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 FRS3O43559 492 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 GPIP06744 558 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 TFPTP0C1Z6 253 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 CRISP3P54108 245 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 SLC18A1P54219 525 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 DSTNP60981 165 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 CEACAM7Q14002 265 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 OR7A5Q15622 319 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 GSTA3Q16772 222 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 MSANTD1Q6ZTZ1 278 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 TMEM99Q8N816 258 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 ZIC4Q8N9L1 334 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 OR9K2Q8NGE7 335 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 OR9I1Q8NGQ6 314 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 SLC38A5Q8WUX1 472 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 VPS33AQ96AX1 596 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 TMEM19Q96HH6 336 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 ZNF385AQ96PM9 386 aaKnown RBP15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 OR52B2Q96RD2 323 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 TPT1P8Q9HAU6 139 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 SLC17A5Q9NRA2 495 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 PARPBPQ9NWS1 579 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 ZIM2Q9NZV7 527 aa15.25■□□□□ 0.03
CHMP1A-205ENST00000548650 POU2F3Q9UKI9 436 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms