RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 A6NIN4 97 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 J3QLW9 94 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 PTP4A3O75365 173 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 TSPAN19P0C672 248 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 ZNF19P17023 458 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 KLK2P20151 261 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 PAICSP22234 425 aaKnown RBP10.88□□□□□ -0.67
CCDC38-202ENST00000546386 HOXA6P31267 233 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 SLC1A3P43003 542 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 EMP3P54852 163 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 OR12D2P58182 307 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 TP53I3Q53FA7 332 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 B3GNTL1Q67FW5 361 aaPredicted RBP10.88□□□□□ -0.67
CCDC38-202ENST00000546386 ZNF550Q7Z398 422 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 PHC2Q8IXK0 858 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 AGBL5Q8NDL9 886 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 DYNC2LI1Q8TCX1 351 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 TRUB1Q8WWH5 349 aaKnown RBP10.88□□□□□ -0.67
CCDC38-202ENST00000546386 SGTBQ96EQ0 304 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 ZC3H10Q96K80 434 aaKnown RBP10.88□□□□□ -0.67
CCDC38-202ENST00000546386 CDCA4Q9BXL8 241 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 NCDNQ9UBB6 729 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 TNFRSF10DQ9UBN6 386 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 SRPK3Q9UPE1 567 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 LSM2Q9Y333 95 aaKnown RBP10.88□□□□□ -0.67
CCDC38-202ENST00000546386 ADAMTS20P59510 1910 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 ZNF407Q9C0G0 2248 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 DOCK7Q96N67 2140 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 CCRL2O00421 344 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 CXCR1P25024 350 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 PSMB10P40306 273 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 MAGEA8P43361 318 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 SLC3A1Q07837 685 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 MELKQ14680 651 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 OCLNQ16625 522 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.88□□□□□ -0.67
CCDC38-202ENST00000546386 CRTC2Q53ET0 693 aaPredicted RBP10.88□□□□□ -0.67
CCDC38-202ENST00000546386 CPEB2Q7Z5Q1 589 aaKnown RBP10.88□□□□□ -0.67
CCDC38-202ENST00000546386 WDFY1Q8IWB7 410 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 LSMEM1Q8N8F7 131 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 OR7G1Q8NGA0 311 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 OR14A16Q8NHC5 309 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 ADAMTS18Q8TE60 1221 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 NKX3-1Q99801 234 aaPredicted RBP10.88□□□□□ -0.67
CCDC38-202ENST00000546386 ZNF160Q9HCG1 818 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 CHCHD3Q9NX63 227 aaKnown RBP10.88□□□□□ -0.67
CCDC38-202ENST00000546386 A0A1B0GTH9 108 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 A0A1W2PNU3 283 aaPredicted RBP10.87□□□□□ -0.67
CCDC38-202ENST00000546386 CDX4O14627 284 aaPredicted RBP10.87□□□□□ -0.67
CCDC38-202ENST00000546386 TSPAN2O60636 221 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 RAD1O60671 282 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 UMODP07911 640 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 SYPP08247 313 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 CDKN2AP42771 156 aaKnown RBP10.87□□□□□ -0.67
CCDC38-202ENST00000546386 CSNK2BP67870 215 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 E2F1Q01094 437 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 QPRTQ15274 297 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 ETFDHQ16134 617 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 C3orf38Q5JPI3 329 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 ZNF468Q5VIY5 522 aaPredicted RBP10.87□□□□□ -0.67
CCDC38-202ENST00000546386 FNDC7Q5VTL7 733 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 ZNF385CQ66K41 422 aaPredicted RBP10.87□□□□□ -0.67
CCDC38-202ENST00000546386 SLC6A19Q695T7 634 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 RTL4Q6ZR62 310 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 TMPRSS11FQ6ZWK6 438 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 UTS2BQ765I0 119 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 FAM181AQ8N9Y4 354 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 MCFD2Q8NI22 146 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 ZNF775Q96BV0 537 aaPredicted RBP10.87□□□□□ -0.67
CCDC38-202ENST00000546386 MND1Q9BWT6 205 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 SLIRPQ9GZT3 109 aaKnown RBP10.87□□□□□ -0.67
CCDC38-202ENST00000546386 SEMA5BQ9P283 1151 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 FBXL2Q9UKC9 423 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 ANKRD11Q6UB99 2663 aaPredicted RBP10.87□□□□□ -0.67
CCDC38-202ENST00000546386 A0A1W2PQL4 384 aaPredicted RBP10.87□□□□□ -0.67
CCDC38-202ENST00000546386 RIIAD1A6NNX1 92 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 RCBTB2O95199 551 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 KLK3P07288 261 aaPredicted RBP10.87□□□□□ -0.67
CCDC38-202ENST00000546386 BMP4P12644 408 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 TCN2P20062 427 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 GTF2E2P29084 291 aaKnown RBP10.87□□□□□ -0.67
CCDC38-202ENST00000546386 RFC3P40938 356 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 CTXN1P60606 82 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 GPR85P60893 370 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 DNASE1L3Q13609 305 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 NCF4Q15080 339 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 NIPAL1Q6NVV3 410 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 NIPAL3Q6P499 406 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 LEG1Q6P5S2 330 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 ARL9Q6T311 187 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 PLXDC2Q6UX71 529 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 TIPARPQ7Z3E1 657 aaKnown RBP10.87□□□□□ -0.67
CCDC38-202ENST00000546386 RABEPKQ7Z6M1 372 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 ATG4DQ86TL0 474 aaPredicted RBP10.87□□□□□ -0.67
CCDC38-202ENST00000546386 KMT5CQ86Y97 462 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 BMPERQ8N8U9 685 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 ZBTB44Q8NCP5 570 aa10.87□□□□□ -0.67
CCDC38-202ENST00000546386 NFAM1Q8NET5 270 aaPredicted RBP10.87□□□□□ -0.67
CCDC38-202ENST00000546386 CNOT2Q9NZN8 540 aaKnown RBP10.87□□□□□ -0.67
CCDC38-202ENST00000546386 ICAM5Q9UMF0 924 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms