RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 TMEM185BQ9H7F4 350 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 CYSLTR2Q9NS75 346 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 ZNF443Q9Y2A4 671 aaPredicted RBP13.52□□□□□ -0.24
HOXC11-202ENST00000546378 C17orf51A8MQB3 221 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 EMC8O43402 210 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 F12P00748 615 aaPredicted RBP13.52□□□□□ -0.24
HOXC11-202ENST00000546378 PRNPP04156 253 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 HIST1H1CP16403 213 aaKnown RBP13.52□□□□□ -0.24
HOXC11-202ENST00000546378 TAF13Q15543 124 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 GSG1Q2KHT4 349 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 TMEM201Q5SNT2 666 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 PYHIN1Q6K0P9 492 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 DPPA4Q7L190 304 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 ARIH2OSQ8N7S6 290 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 C2CD4CQ8TF44 421 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 ZNRF4Q8WWF5 429 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 CAMK1GQ96NX5 476 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.52□□□□□ -0.24
HOXC11-202ENST00000546378 TCF7L1Q9HCS4 588 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 B3GNT2Q9NY97 397 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 MED31Q9Y3C7 131 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 SESN1Q9Y6P5 492 aa13.52□□□□□ -0.24
HOXC11-202ENST00000546378 MPDZO75970 2070 aa13.52□□□□□ -0.25
HOXC11-202ENST00000546378 TMEM72A0PK05 275 aa13.52□□□□□ -0.25
HOXC11-202ENST00000546378 M0QYG6 137 aa13.52□□□□□ -0.25
HOXC11-202ENST00000546378 HMGN1P05114 100 aa13.52□□□□□ -0.25
HOXC11-202ENST00000546378 LPLP06858 475 aa13.52□□□□□ -0.25
HOXC11-202ENST00000546378 ZNF3P17036 446 aa13.52□□□□□ -0.25
HOXC11-202ENST00000546378 ACTR1BP42025 376 aa13.52□□□□□ -0.25
HOXC11-202ENST00000546378 GAS1P54826 345 aa13.52□□□□□ -0.25
HOXC11-202ENST00000546378 ZP1P60852 638 aa13.52□□□□□ -0.25
HOXC11-202ENST00000546378 ACTR1AP61163 376 aa13.52□□□□□ -0.25
HOXC11-202ENST00000546378 CDK3Q00526 305 aa13.52□□□□□ -0.25
HOXC11-202ENST00000546378 TMPRSS9Q7Z410 1059 aa13.52□□□□□ -0.25
HOXC11-202ENST00000546378 RANBP3LQ86VV4 465 aaPredicted RBP13.52□□□□□ -0.25
HOXC11-202ENST00000546378 OR51Q1Q8NH59 317 aa13.52□□□□□ -0.25
HOXC11-202ENST00000546378 DIO2Q92813 273 aa13.52□□□□□ -0.25
HOXC11-202ENST00000546378 GSX2Q9BZM3 304 aa13.52□□□□□ -0.25
HOXC11-202ENST00000546378 C14orf105Q9NVL8 296 aa13.52□□□□□ -0.25
HOXC11-202ENST00000546378 NTMQ9P121 344 aa13.52□□□□□ -0.25
HOXC11-202ENST00000546378 FBXO4Q9UKT5 387 aa13.52□□□□□ -0.25
HOXC11-202ENST00000546378 A0A1B0GV50 99 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 CDC14CA4D256 554 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 ANXA2P2A6NMY6 339 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 STK25O00506 426 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 PDCD5O14737 125 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 AGPAT2O15120 278 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 EIF1AXP47813 144 aaKnown RBP13.51□□□□□ -0.25
HOXC11-202ENST00000546378 STARP49675 285 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 CAMK2DQ13557 499 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 RUNX3Q13761 415 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 C2orf68Q2NKX9 166 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 ALG10BQ5I7T1 473 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 LRRN1Q6UXK5 716 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 LRRC69Q6ZNQ3 347 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 FAM46BQ96A09 425 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 SLC25A36Q96CQ1 311 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 MRPL38Q96DV4 380 aaKnown RBP13.51□□□□□ -0.25
HOXC11-202ENST00000546378 METTL2AQ96IZ6 378 aaKnown RBP13.51□□□□□ -0.25
HOXC11-202ENST00000546378 MRGPRX3Q96LB0 322 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 LHX6Q9UPM6 363 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 MRPS2Q9Y399 296 aaKnown RBP13.51□□□□□ -0.25
HOXC11-202ENST00000546378 IFNA16P05015 189 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 ANXA2P07355 339 aaKnown RBP13.51□□□□□ -0.25
HOXC11-202ENST00000546378 SBK2P0C263 348 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 ICAM2P13598 275 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 GTF2F2P13984 249 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 GJA4P35212 333 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 P2RY2P41231 377 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 MLF2Q15773 248 aaPredicted RBP13.51□□□□□ -0.25
HOXC11-202ENST00000546378 SLC36A2Q495M3 483 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 MRM1Q6IN84 353 aaKnown RBP13.51□□□□□ -0.25
HOXC11-202ENST00000546378 METTL3Q86U44 580 aaKnown RBP13.51□□□□□ -0.25
HOXC11-202ENST00000546378 TEX19Q8NA77 164 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 OR10AC1Q8NH08 325 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 TSEN15Q8WW01 171 aaKnown RBP13.51□□□□□ -0.25
HOXC11-202ENST00000546378 MS4A6EQ96DS6 147 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 GHITMQ9H3K2 345 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 ZNF768Q9H5H4 540 aaKnown RBP13.51□□□□□ -0.25
HOXC11-202ENST00000546378 ZNF576Q9H609 170 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 PFDN2Q9UHV9 154 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 FRYQ5TBA9 3013 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 TRAV18A0A075B6X5 111 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 EIF1AYO14602 144 aaKnown RBP13.51□□□□□ -0.25
HOXC11-202ENST00000546378 EML2O95834 649 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 ITPKBP27987 946 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 HTR2AP28223 471 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 ZCCHC12Q6PEW1 402 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 ENPP7Q6UWV6 458 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 UNQ6126/PRO20091Q6UXV3 157 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 KCTD9Q7L273 389 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 CD163Q86VB7 1156 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 PRR22Q8IZ63 422 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 ZNF676Q8N7Q3 588 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 OR2A1Q8NGT9 310 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 OR5K2Q8NHB8 316 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 PINK1Q9BXM7 581 aa13.51□□□□□ -0.25
HOXC11-202ENST00000546378 MRTO4Q9UKD2 239 aaKnown RBP13.51□□□□□ -0.25
HOXC11-202ENST00000546378 TRAPPC2P0DI81 140 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 TRAPPC2BP0DI82 140 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms