RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 TRBC2A0A5B9 178 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 TSPAN11A1L157 253 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 TSTD3H0UI37 97 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 AP4M1O00189 453 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 GABRPO00591 440 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 KIAA0355O15063 1070 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 SMAD9O15198 467 aaKnown RBP7.28□□□□□ -1.24
UBR1-202ENST00000546274 LEFTY1O75610 366 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 TGFB1P01137 390 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 SRPRAP08240 638 aaKnown RBP7.28□□□□□ -1.24
UBR1-202ENST00000546274 PIPP12273 146 aaPredicted RBP7.28□□□□□ -1.24
UBR1-202ENST00000546274 TIMP2P16035 220 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 HCCSP53701 268 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 GMFBP60983 142 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 NUTF2P61970 127 aaKnown RBP7.28□□□□□ -1.24
UBR1-202ENST00000546274 MAT1AQ00266 395 aaKnown RBP7.28□□□□□ -1.24
UBR1-202ENST00000546274 DHODHQ02127 395 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 ZNF630Q2M218 657 aaPredicted RBP7.28□□□□□ -1.24
UBR1-202ENST00000546274 ODF4Q2M2E3 257 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 FIGNL1Q6PIW4 674 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 BAIAP2L2Q6UXY1 529 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 OR2W3Q7Z3T1 314 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 NR2C2APQ86WQ0 139 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 LRRC28Q86X40 367 aaPredicted RBP7.28□□□□□ -1.24
UBR1-202ENST00000546274 DNAAF1Q8NEP3 725 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 OR11G2Q8NGC1 345 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 OR52I1Q8NGK6 324 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 PAQR8Q8TEZ7 354 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 THAP4Q8WY91 577 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 TMEM159Q96B96 161 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 MAPKAP1Q9BPZ7 522 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 WFDC6Q9BQY6 131 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 PRM3Q9NNZ6 103 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 SIRT7Q9NRC8 400 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 TAAR2Q9P1P5 351 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 NDOR1Q9UHB4 597 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 SLC25A13Q9UJS0 675 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 SSUH2Q9Y2M2 353 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 TCF20Q9UGU0 1960 aaKnown RBP7.28□□□□□ -1.24
UBR1-202ENST00000546274 NOTCH4Q99466 2003 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 CARNS1A5YM72 827 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 SLC28A2O43868 658 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 CREBL2O60519 120 aaPredicted RBP7.28□□□□□ -1.24
UBR1-202ENST00000546274 TBX6O95947 436 aaPredicted RBP7.28□□□□□ -1.24
UBR1-202ENST00000546274 ACTL6AO96019 429 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 CATP04040 527 aaKnown RBP7.28□□□□□ -1.24
UBR1-202ENST00000546274 ADH1AP07327 375 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 UBCP0CG48 685 aaKnown RBP7.28□□□□□ -1.24
UBR1-202ENST00000546274 ABOP16442 354 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 STAT5AP42229 794 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 TAS2R50P59544 299 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 POLR2LP62875 67 aaKnown RBP7.28□□□□□ -1.24
UBR1-202ENST00000546274 SLBPQ14493 270 aaKnown RBP eCLIP7.28□□□□□ -1.24
UBR1-202ENST00000546274 ATXN7L3Q14CW9 347 aaPredicted RBP7.28□□□□□ -1.24
UBR1-202ENST00000546274 OCLNQ16625 522 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 RPS26P11Q5JNZ5 115 aaPredicted RBP7.28□□□□□ -1.24
UBR1-202ENST00000546274 DEFB128Q7Z7B8 93 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 OAFQ86UD1 273 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 GPR32P1Q8NGA4 272 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 OR10D4PQ8NGN7 298 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 PPCDCQ96CD2 204 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 TMEM169Q96HH4 297 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 SGPP1Q9BX95 441 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 SLC6A16Q9GZN6 736 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 AUNIPQ9H7T9 357 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 NPDC1Q9NQX5 325 aaPredicted RBP7.28□□□□□ -1.24
UBR1-202ENST00000546274 PTGFRNQ9P2B2 879 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 RCE1Q9Y256 329 aa7.28□□□□□ -1.24
UBR1-202ENST00000546274 SF3B6Q9Y3B4 125 aaKnown RBP7.28□□□□□ -1.24
UBR1-202ENST00000546274 KIAA0100Q14667 2235 aaKnown RBP7.28□□□□□ -1.24
UBR1-202ENST00000546274 OR14I1A6ND48 311 aa7.27□□□□□ -1.24
UBR1-202ENST00000546274 ANKRD61A6NGH8 418 aa7.27□□□□□ -1.24
UBR1-202ENST00000546274 RFPL4AA6NLU0 287 aa7.27□□□□□ -1.24
UBR1-202ENST00000546274 RFPL4AL1F8VTS6 287 aa7.27□□□□□ -1.24
UBR1-202ENST00000546274 PPIHO43447 177 aaKnown RBP7.27□□□□□ -1.24
UBR1-202ENST00000546274 LILRB3O75022 631 aa7.27□□□□□ -1.24
UBR1-202ENST00000546274 THEGLP0DJG4 465 aa7.27□□□□□ -1.24
UBR1-202ENST00000546274 GABRA5P31644 462 aa7.27□□□□□ -1.24
UBR1-202ENST00000546274 RPL3P39023 403 aaKnown RBP7.27□□□□□ -1.24
UBR1-202ENST00000546274 CCR2P41597 374 aa7.27□□□□□ -1.24
UBR1-202ENST00000546274 OR10A3P58181 314 aa7.27□□□□□ -1.24
UBR1-202ENST00000546274 AP3S2P59780 193 aa7.27□□□□□ -1.24
UBR1-202ENST00000546274 MAP4K2Q12851 820 aa7.27□□□□□ -1.24
UBR1-202ENST00000546274 TMEM115Q12893 351 aaPredicted RBP7.27□□□□□ -1.24
UBR1-202ENST00000546274 HEPACAMQ14CZ8 416 aa7.27□□□□□ -1.24
UBR1-202ENST00000546274 C2orf68Q2NKX9 166 aa7.27□□□□□ -1.24
UBR1-202ENST00000546274 PLEKHN1Q494U1 663 aaPredicted RBP7.27□□□□□ -1.24
UBR1-202ENST00000546274 MINDY4Q4G0A6 757 aa7.27□□□□□ -1.24
UBR1-202ENST00000546274 TRIM40Q6P9F5 258 aa7.27□□□□□ -1.24
UBR1-202ENST00000546274 ZC3H14Q6PJT7 736 aaKnown RBP7.27□□□□□ -1.24
UBR1-202ENST00000546274 CEACAM20Q6UY09 585 aa7.27□□□□□ -1.24
UBR1-202ENST00000546274 MOB3CQ70IA8 216 aa7.27□□□□□ -1.24
UBR1-202ENST00000546274 TIPARPQ7Z3E1 657 aaKnown RBP7.27□□□□□ -1.24
UBR1-202ENST00000546274 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.27□□□□□ -1.24
UBR1-202ENST00000546274 TMEM200AQ86VY9 491 aa7.27□□□□□ -1.24
UBR1-202ENST00000546274 ZNF740Q8NDX6 193 aa7.27□□□□□ -1.24
UBR1-202ENST00000546274 MRPS31Q92665 395 aaKnown RBP7.27□□□□□ -1.24
UBR1-202ENST00000546274 GLYATL1Q969I3 302 aa7.27□□□□□ -1.24
UBR1-202ENST00000546274 GAL3ST3Q96A11 431 aa7.27□□□□□ -1.24
UBR1-202ENST00000546274 ZNF689Q96CS4 500 aaPredicted RBP7.27□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms