RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 CDSNQ15517 529 aa18.31■□□□□ 0.52
HMGA2-211ENST00000545998 C1orf140Q5VVS0 124 aa18.31■□□□□ 0.52
HMGA2-211ENST00000545998 OR2A2Q6IF42 318 aa18.31■□□□□ 0.52
HMGA2-211ENST00000545998 CYP2R1Q6VVX0 501 aa18.31■□□□□ 0.52
HMGA2-211ENST00000545998 WDR88Q6ZMY6 472 aa18.31■□□□□ 0.52
HMGA2-211ENST00000545998 GDF7Q7Z4P5 450 aa18.31■□□□□ 0.52
HMGA2-211ENST00000545998 RNF217Q8TC41 542 aa18.31■□□□□ 0.52
HMGA2-211ENST00000545998 ASB5Q8WWX0 329 aa18.31■□□□□ 0.52
HMGA2-211ENST00000545998 ROBO4Q8WZ75 1007 aa18.31■□□□□ 0.52
HMGA2-211ENST00000545998 INTS12Q96CB8 462 aaKnown RBP18.31■□□□□ 0.52
HMGA2-211ENST00000545998 CCDC124Q96CT7 223 aaKnown RBP18.31■□□□□ 0.52
HMGA2-211ENST00000545998 ASB9Q96DX5 294 aa18.31■□□□□ 0.52
HMGA2-211ENST00000545998 SLC41A3Q96GZ6 507 aa18.31■□□□□ 0.52
HMGA2-211ENST00000545998 CADM1Q9BY67 442 aaKnown RBP18.31■□□□□ 0.52
HMGA2-211ENST00000545998 SLC7A7Q9UM01 511 aa18.31■□□□□ 0.52
HMGA2-211ENST00000545998 A4GNTQ9UNA3 340 aa18.31■□□□□ 0.52
HMGA2-211ENST00000545998 DNPH1O43598 174 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 KLK2P20151 261 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 ENPP1P22413 925 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 CTSSP25774 331 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 IDUAP35475 653 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 AGFG1P52594 562 aaKnown RBP18.3■□□□□ 0.52
HMGA2-211ENST00000545998 FOXF2Q12947 444 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 LCN8Q6JVE9 175 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 FCRLAQ7L513 359 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 TSEN54Q7Z6J9 526 aaKnown RBP18.3■□□□□ 0.52
HMGA2-211ENST00000545998 GCNT2Q8N0V5 402 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 RNF128Q8TEB7 428 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 KTI12Q96EK9 354 aaPredicted RBP18.3■□□□□ 0.52
HMGA2-211ENST00000545998 PYURFQ96I23 114 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 PRRC1Q96M27 445 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 PTDSS2Q9BVG9 487 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 ZNF629Q9UEG4 869 aaPredicted RBP18.3■□□□□ 0.52
HMGA2-211ENST00000545998 RIMS3Q9UJD0 308 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 IGHV3-15A0A0B4J1V0 119 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 LIPT2A6NK58 231 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 ACOT8O14734 319 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 SMAD9O15198 467 aaKnown RBP18.3■□□□□ 0.52
HMGA2-211ENST00000545998 SEMG1P04279 462 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 OR2B6P58173 313 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 SLC35A1P78382 337 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 GUSBP1Q15486 140 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 MTX3Q5HYI7 312 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 C5orf46Q6UWT4 87 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 DHFR2Q86XF0 187 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 LIX1LQ8IVB5 337 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 LILRB4Q8NHJ6 448 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 MPP4Q96JB8 637 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 C7orf34Q96L11 122 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 PRSS27Q9BQR3 290 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 TMEM43Q9BTV4 400 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 ZNF426Q9BUY5 554 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.3■□□□□ 0.52
HMGA2-211ENST00000545998 V9GYQ6 96 aa18.3■□□□□ 0.52
HMGA2-211ENST00000545998 J3KTA2 159 aa18.29■□□□□ 0.52
HMGA2-211ENST00000545998 GPIP06744 558 aa18.29■□□□□ 0.52
HMGA2-211ENST00000545998 CRHP06850 196 aa18.29■□□□□ 0.52
HMGA2-211ENST00000545998 THRBP10828 461 aa18.29■□□□□ 0.52
HMGA2-211ENST00000545998 YAP1P46937 504 aaKnown RBP18.29■□□□□ 0.52
HMGA2-211ENST00000545998 H3F3AP84243 136 aa18.29■□□□□ 0.52
HMGA2-211ENST00000545998 TRAP1Q12931 704 aaKnown RBP18.29■□□□□ 0.52
HMGA2-211ENST00000545998 P3H2Q8IVL5 708 aa18.29■□□□□ 0.52
HMGA2-211ENST00000545998 ABHD3Q8WU67 409 aa18.29■□□□□ 0.52
HMGA2-211ENST00000545998 SFXN3Q9BWM7 321 aa18.29■□□□□ 0.52
HMGA2-211ENST00000545998 NBPF19A0A087WUL8 3843 aa18.28■□□□□ 0.52
HMGA2-211ENST00000545998 A0A1W2PNV4 684 aa18.28■□□□□ 0.52
HMGA2-211ENST00000545998 TCRBV5S2A0A599 114 aa18.28■□□□□ 0.52
HMGA2-211ENST00000545998 FTCDNL1E5RQL4 147 aa18.28■□□□□ 0.52
HMGA2-211ENST00000545998 EBAG9O00559 213 aa18.28■□□□□ 0.52
HMGA2-211ENST00000545998 FFAR1O14842 300 aa18.28■□□□□ 0.52
HMGA2-211ENST00000545998 EIF1BO60739 113 aaKnown RBP18.28■□□□□ 0.52
HMGA2-211ENST00000545998 TNFSF13O75888 250 aa18.28■□□□□ 0.52
HMGA2-211ENST00000545998 AHSA1O95433 338 aa18.28■□□□□ 0.52
HMGA2-211ENST00000545998 IL18BPO95998 194 aa18.28■□□□□ 0.52
HMGA2-211ENST00000545998 FPR1P21462 350 aa18.28■□□□□ 0.52
HMGA2-211ENST00000545998 RPS5P46782 204 aaKnown RBP18.28■□□□□ 0.52
HMGA2-211ENST00000545998 RNPS1Q15287 305 aaKnown RBP18.28■□□□□ 0.52
HMGA2-211ENST00000545998 OR7A5Q15622 319 aa18.28■□□□□ 0.52
HMGA2-211ENST00000545998 GTF2IRD2BQ6EKJ0 949 aa18.28■□□□□ 0.52
HMGA2-211ENST00000545998 CCDC121Q6ZUS5 278 aa18.28■□□□□ 0.52
HMGA2-211ENST00000545998 GTF2IRD2Q86UP8 949 aa18.28■□□□□ 0.52
HMGA2-211ENST00000545998 NKAIN4Q8IVV8 208 aa18.28■□□□□ 0.52
HMGA2-211ENST00000545998 SLC43A2Q8N370 569 aa18.28■□□□□ 0.52
HMGA2-211ENST00000545998 MFSD8Q8NHS3 518 aa18.28■□□□□ 0.52
HMGA2-211ENST00000545998 CA5BP1Q8WTZ4 195 aa18.28■□□□□ 0.52
HMGA2-211ENST00000545998 TAAR8Q969N4 342 aa18.28■□□□□ 0.52
HMGA2-211ENST00000545998 ZHX1-C8orf76Q96EF9 292 aa18.28■□□□□ 0.52
HMGA2-211ENST00000545998 GMPPAQ96IJ6 420 aaPredicted RBP18.28■□□□□ 0.52
HMGA2-211ENST00000545998 LRMDAQ9H2I8 198 aa18.28■□□□□ 0.52
HMGA2-211ENST00000545998 NDUFAF4Q9P032 175 aa18.28■□□□□ 0.52
HMGA2-211ENST00000545998 ENPP4Q9Y6X5 453 aa18.28■□□□□ 0.52
HMGA2-211ENST00000545998 TRAV36DV7A0A075B6V5 113 aa18.27■□□□□ 0.52
HMGA2-211ENST00000545998 ZNF814B7Z6K7 855 aa18.27■□□□□ 0.52
HMGA2-211ENST00000545998 CYTIPO60759 359 aa18.27■□□□□ 0.52
HMGA2-211ENST00000545998 FZD7O75084 574 aa18.27■□□□□ 0.52
HMGA2-211ENST00000545998 SS18L1O75177 396 aaPredicted RBP18.27■□□□□ 0.52
HMGA2-211ENST00000545998 PRSS23O95084 383 aa18.27■□□□□ 0.52
HMGA2-211ENST00000545998 CLDN14O95500 239 aa18.27■□□□□ 0.52
HMGA2-211ENST00000545998 PTNP21246 168 aa18.27■□□□□ 0.52
HMGA2-211ENST00000545998 BMP5P22003 454 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms