RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 KCNE5Q9UJ90 142 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 FBXL4Q9UKA2 621 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 SLC17A4Q9Y2C5 497 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 ETV7Q9Y603 341 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 URADA6NGE7 173 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 OR52A4PA6NMU1 304 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 KRBOX1C9JBD0 128 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 L7N2F9 121 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 ACOT7O00154 380 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 PEX12O00623 359 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 ARPC1BO15143 372 aaKnown RBP8.05□□□□□ -1.12
TDP1-204ENST00000545686 B3GALT2O43825 422 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 GALR3O60755 368 aaPredicted RBP8.05□□□□□ -1.12
TDP1-204ENST00000545686 KHDRBS3O75525 346 aaKnown RBP8.05□□□□□ -1.12
TDP1-204ENST00000545686 SERPINI2O75830 405 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 TOXO94900 526 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 GYPBP06028 91 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 EDNRAP25101 427 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 CALCRP30988 508 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 MAP3K8P41279 467 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 PTH2RP49190 550 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 PPP2CBP62714 309 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 PPP2CAP67775 309 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 FHL1Q13642 323 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 SFRP4Q6FHJ7 346 aaPredicted RBP8.05□□□□□ -1.12
TDP1-204ENST00000545686 CHMP1BQ7LBR1 199 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 SYT9Q86SS6 491 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 IZUMO1Q8IYV9 350 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 MEIOBQ8N635 442 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 RSPRY1Q96DX4 576 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 TM4SF19Q96DZ7 209 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 ZMYND19Q96E35 227 aaPredicted RBP8.05□□□□□ -1.12
TDP1-204ENST00000545686 ELMOD3Q96FG2 381 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 S100A16Q96FQ6 103 aaKnown RBP8.05□□□□□ -1.12
TDP1-204ENST00000545686 DEFB118Q96PH6 123 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 DERL3Q96Q80 235 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 DPYSL5Q9BPU6 564 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 AIFM2Q9BRQ8 373 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 OR10A4Q9H209 315 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 NOX3Q9HBY0 568 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 LYRM4Q9HD34 91 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 SDHAF2Q9NX18 166 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 GNG8Q9UK08 70 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 DAPP1Q9UN19 280 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 FLVCR2Q9UPI3 526 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 MRPS23Q9Y3D9 190 aaKnown RBP8.05□□□□□ -1.12
TDP1-204ENST00000545686 SLC22A7Q9Y694 548 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 COLEC10Q9Y6Z7 277 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 C2orf16Q68DN1 1984 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 A0A1W2PPK0 400 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 HMSDA8MTL9 139 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 TRIM77I1YAP6 450 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 RGS11O94810 467 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 NDUFB6O95139 128 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 NDUFB2O95178 105 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 ALDOBP05062 364 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 CEACAM5P06731 702 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 ADRB1P08588 477 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 CXCL2P19875 107 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 NFYAP23511 347 aaPredicted RBP8.05□□□□□ -1.12
TDP1-204ENST00000545686 DIO1P49895 249 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 SCAND1P57086 179 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 HTRA4P83105 476 aaPredicted RBP8.05□□□□□ -1.12
TDP1-204ENST00000545686 IL10RAQ13651 578 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 ISXQ2M1V0 245 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 TMEM255AQ5JRV8 349 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 PXDC1Q5TGL8 231 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 SLC25A25Q6KCM7 469 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 APOOLQ6UXV4 268 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 DNM1P46Q6ZS02 220 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 NAXDQ8IW45 347 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 IQCF2Q8IXL9 164 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 OR52E2Q8NGJ4 325 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 THEM6Q8WUY1 208 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 ASB13Q8WXK3 278 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 TNFRSF13CQ96RJ3 184 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 GFI1Q99684 422 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 ARPC5LQ9BPX5 153 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 BEX1Q9HBH7 125 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 NOX4Q9NPH5 578 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 ANKRD10Q9NXR5 420 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 THAP10Q9P2Z0 257 aaPredicted RBP8.05□□□□□ -1.12
TDP1-204ENST00000545686 NCDNQ9UBB6 729 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 FOXJ3Q9UPW0 622 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 ZNF281Q9Y2X9 895 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 KCNMB2Q9Y691 235 aa8.05□□□□□ -1.12
TDP1-204ENST00000545686 MPDZO75970 2070 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 A0A1B0GWA3 101 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 PIN1P1O15428 100 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 LATO43561 262 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 NUP62P37198 522 aaPredicted RBP8.04□□□□□ -1.12
TDP1-204ENST00000545686 RAD52P43351 418 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 PSMA6P60900 246 aaKnown RBP8.04□□□□□ -1.12
TDP1-204ENST00000545686 PLAURQ03405 335 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 HTR4Q13639 388 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 CAMK1Q14012 370 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 PON3Q15166 354 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 TRMT12Q53H54 448 aaKnown RBP8.04□□□□□ -1.12
TDP1-204ENST00000545686 TMEM69Q5SWH9 247 aa8.04□□□□□ -1.12
TDP1-204ENST00000545686 PWWP2BQ6NUJ5 590 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms