RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 RFXANKO14593 260 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 UBDO15205 165 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 EFNA2O43921 213 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 DIAPH2O60879 1101 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 SLC22A3O75751 556 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 PRKD3O94806 890 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 H6PDO95479 791 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 KRT75O95678 551 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 HRGP04196 525 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 UBTFL6P0CB48 400 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-223ENST00000545440 PPP3CBP16298 524 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 PGCP20142 388 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 RPS4Y1P22090 263 aaKnown RBP6.84□□□□□ -1.31
SNHG1-223ENST00000545440 SLC7A1P30825 629 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 CDKN2CP42773 168 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 MRPL19P49406 292 aaKnown RBP6.84□□□□□ -1.31
SNHG1-223ENST00000545440 ART1P52961 327 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 IST1P53990 364 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 CASP9P55211 416 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 CARD18P57730 90 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 FAM27E3Q08E93 113 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 TOMM34Q15785 309 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-223ENST00000545440 MAPK14Q16539 360 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 TIGD2Q4W5G0 525 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 SLC9B1Q4ZJI4 515 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 GPAT3Q53EU6 434 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 NXNQ6DKJ4 435 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 LHFPL2Q6ZUX7 228 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 STK32CQ86UX6 486 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 CMIPQ8IY22 773 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 CLRN3Q8NCR9 226 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 RFWD2Q8NHY2 731 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 ABHD3Q8WU67 409 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 SLC25A43Q8WUT9 341 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-223ENST00000545440 ZNF75CPQ92670 426 aaPredicted RBP6.84□□□□□ -1.31
SNHG1-223ENST00000545440 PMM1Q92871 262 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 OSTF1Q92882 214 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 MBD6Q96DN6 1003 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 REXO5Q96IC2 774 aaKnown RBP6.84□□□□□ -1.31
SNHG1-223ENST00000545440 C16orf92Q96LL3 132 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 OR52B2Q96RD2 323 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 FOXB1Q99853 325 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 TACO1Q9BSH4 297 aaKnown RBP6.84□□□□□ -1.31
SNHG1-223ENST00000545440 INPP5KQ9BT40 448 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 THUMPD3Q9BV44 507 aaKnown RBP6.84□□□□□ -1.31
SNHG1-223ENST00000545440 SRXN1Q9BYN0 137 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 CXXC4Q9H2H0 198 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 RMND5AQ9H871 391 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 FANCFQ9NPI8 374 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 PLSCR4Q9NRQ2 329 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 ZNF226Q9NYT6 803 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 KLHL13Q9P2N7 655 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 USH1CQ9Y6N9 552 aa6.84□□□□□ -1.31
SNHG1-223ENST00000545440 DSPPQ9NZW4 1301 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 AGAP5A6NIR3 686 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 HMGB1P1B2RPK0 211 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-223ENST00000545440 C16orf97H3BN30 126 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 CASKO14936 926 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 POLR3GO15318 223 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-223ENST00000545440 TGDSO95455 350 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 OPN1LWP04000 364 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 RAF1P04049 648 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 CHRM4P08173 479 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 ZCCHC18P0CG32 403 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 CRYGSP22914 178 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 DNASE1P24855 282 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 KCNJ5P48544 419 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 MVDP53602 400 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 RAC3P60763 192 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 KCNJ10P78508 379 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 TMEM176BQ3YBM2 270 aaPredicted RBP6.83□□□□□ -1.32
SNHG1-223ENST00000545440 SYT14P1Q58G82 188 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 TTMPQ5BVD1 217 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 PGM2L1Q6PCE3 622 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 EPGNQ6UW88 154 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 LRRC74BQ6ZQY2 392 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 ZNF621Q6ZSS3 439 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 PLEKHM3Q6ZWE6 761 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 FCRLAQ7L513 359 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 OLIG3Q7RTU3 272 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 GRINAQ7Z429 371 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 MIER2Q8N344 545 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 SLC43A2Q8N370 569 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 OR9I1Q8NGQ6 314 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 LRRC8CQ8TDW0 803 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 ZNF524Q96C55 264 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 ITCHQ96J02 903 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 MARK4Q96L34 752 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 WFIKKN1Q96NZ8 548 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 MED18Q9BUE0 208 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 QRSL1Q9H0R6 528 aaKnown RBP6.83□□□□□ -1.32
SNHG1-223ENST00000545440 OR10A4Q9H209 315 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 SLC38A1Q9H2H9 487 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 CNTD2Q9H8S5 307 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 PLEKHF2Q9H8W4 249 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 VIPAS39Q9H9C1 493 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 BCO1Q9HAY6 547 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 TCF7L2Q9NQB0 619 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 SERINC1Q9NRX5 453 aa6.83□□□□□ -1.32
SNHG1-223ENST00000545440 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms