RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 ALKBH1Q13686 389 aaKnown RBP11.7□□□□□ -0.54
SMG8-202ENST00000543872 CSRP2Q16527 193 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 STPG1Q5TH74 334 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 CCDC116Q8IYX3 515 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 SLC25A38Q96DW6 304 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 SLC41A3Q96GZ6 507 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 GAS2L1Q99501 681 aaPredicted RBP11.7□□□□□ -0.54
SMG8-202ENST00000543872 TLNRD1Q9H1K6 362 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 DHCR7Q9UBM7 475 aaKnown RBP11.7□□□□□ -0.54
SMG8-202ENST00000543872 SLC7A7Q9UM01 511 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 ZNF705EA8MWA4 302 aaPredicted RBP11.7□□□□□ -0.54
SMG8-202ENST00000543872 GPR37O15354 613 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 PRICKLE3O43900 615 aaPredicted RBP11.7□□□□□ -0.54
SMG8-202ENST00000543872 TMPRSS11DO60235 418 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 SBK2P0C263 348 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 ZGLP1P0C6A0 271 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 PRF1P14222 555 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 NUBP1P53384 320 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 AGERQ15109 404 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 ACER2Q5QJU3 275 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 HENMT1Q5T8I9 393 aaKnown RBP11.7□□□□□ -0.54
SMG8-202ENST00000543872 DMKNQ6E0U4 476 aaPredicted RBP11.7□□□□□ -0.54
SMG8-202ENST00000543872 GDF7Q7Z4P5 450 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 BEST3Q8N1M1 668 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 OR51A7Q8NH64 312 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 SUN3Q8TAQ9 357 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 NR4A3Q92570 626 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 DVL3Q92997 716 aaPredicted RBP11.7□□□□□ -0.54
SMG8-202ENST00000543872 GHRLQ9UBU3 117 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 FARS2O95363 451 aaKnown RBP11.7□□□□□ -0.54
SMG8-202ENST00000543872 C1orf105O95561 183 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 TMIGD3P0DMS9 266 aaPredicted RBP11.7□□□□□ -0.54
SMG8-202ENST00000543872 MGMTP16455 207 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 NT5EP21589 574 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 CSF2RBP32927 897 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 CD70P32970 193 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 PGDP52209 483 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 TAS2R43P59537 309 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 SNRPD1P62314 119 aaKnown RBP11.7□□□□□ -0.54
SMG8-202ENST00000543872 SRSF3P84103 164 aaKnown RBP11.7□□□□□ -0.54
SMG8-202ENST00000543872 TGM3Q08188 693 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 FUT5Q11128 374 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 ZNF805Q5CZA5 627 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 UNQ6126/PRO20091Q6UXV3 157 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 FBXO22Q8NEZ5 403 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 PAQR8Q8TEZ7 354 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 VOPP1Q96AW1 172 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 ZMYND19Q96E35 227 aaPredicted RBP11.7□□□□□ -0.54
SMG8-202ENST00000543872 PFDN5Q99471 154 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 PIGMQ9H3S5 423 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 EXO5Q9H790 373 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 CACYBPQ9HB71 228 aaKnown RBP11.7□□□□□ -0.54
SMG8-202ENST00000543872 IL21RQ9HBE5 538 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 KLHL28Q9NXS3 571 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 GNG8Q9UK08 70 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 ALPK2Q86TB3 2170 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 CCL15-CCL14A0A0B4J2E2 113 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 FAM86C2PA6NEL3 165 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 ADCYAP1P18509 176 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 MAPK8P45983 427 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 KHKP50053 298 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 RBM39Q14498 530 aaKnown RBP11.69□□□□□ -0.54
SMG8-202ENST00000543872 CCL15Q16663 113 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 DEFB115Q30KQ5 88 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 MOB3CQ70IA8 216 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 TAS1R1Q7RTX1 841 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 ZSCAN1Q8NBB4 408 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 CA5BP1Q8WTZ4 195 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 GAL3ST1Q99999 423 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 BARX1Q9HBU1 254 aaPredicted RBP11.69□□□□□ -0.54
SMG8-202ENST00000543872 ZNF629Q9UEG4 869 aaPredicted RBP11.69□□□□□ -0.54
SMG8-202ENST00000543872 TRAV1-2A0A0B4J238 106 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 TMEM272A0A1B0GTI8 110 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 A0A1B0GTQ1 180 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 OR6C76A6NM76 312 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 F5H0A9 414 aaPredicted RBP11.69□□□□□ -0.54
SMG8-202ENST00000543872 CACNB4O00305 520 aaPredicted RBP11.69□□□□□ -0.54
SMG8-202ENST00000543872 SYT5O00445 386 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 FADS1O60427 444 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 SFTPCP11686 197 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 PCBP4P57723 403 aaKnown RBP11.69□□□□□ -0.54
SMG8-202ENST00000543872 LMAN2Q12907 356 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 KRT33BQ14525 404 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 LRRTM1Q86UE6 522 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 TMIEQ8NEW7 156 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 OR51S1Q8NGJ8 323 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 OR4C16Q8NGL9 310 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 SNX33Q8WV41 574 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 VRK1Q99986 396 aaPredicted RBP11.69□□□□□ -0.54
SMG8-202ENST00000543872 SPOCK3Q9BQ16 436 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 ZFP57Q9NU63 452 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 FBXL3Q9UKT7 428 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 UNC119BA6NIH7 251 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 KCNAB3O43448 404 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 FCMRO60667 390 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 RBBP9O75884 186 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 THY1P04216 161 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 APEHP13798 732 aaKnown RBP11.69□□□□□ -0.54
SMG8-202ENST00000543872 RPA2P15927 270 aa11.69□□□□□ -0.54
SMG8-202ENST00000543872 SRMP19623 302 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms