RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 RASGEF1BQ0VAM2 473 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 TRAM2Q15035 370 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 RNPS1Q15287 305 aaKnown RBP5.66□□□□□ -1.5
LTBR-212ENST00000543542 FXNQ16595 210 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 ZNF239Q16600 458 aaKnown RBP5.66□□□□□ -1.5
LTBR-212ENST00000543542 CTU2Q2VPK5 515 aaKnown RBP5.66□□□□□ -1.5
LTBR-212ENST00000543542 FGD3Q5JSP0 725 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 TMEM201Q5SNT2 666 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 OTUD3Q5T2D3 398 aaPredicted RBP5.66□□□□□ -1.5
LTBR-212ENST00000543542 RIPPLY2Q5TAB7 128 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 TMEM225Q6GV28 225 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 RTL6Q6ICC9 239 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 LCN8Q6JVE9 175 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 ZNF730Q6ZMV8 503 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 FCRLAQ7L513 359 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 HIST3H2AQ7L7L0 130 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 GPAT4Q86UL3 456 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 LSRQ86X29 649 aaPredicted RBP5.66□□□□□ -1.5
LTBR-212ENST00000543542 CCDC71Q8IV32 467 aaPredicted RBP5.66□□□□□ -1.5
LTBR-212ENST00000543542 NKAIN4Q8IVV8 208 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 CDK20Q8IZL9 346 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 GCNT2Q8N0V5 402 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 FAM86B1Q8N7N1 296 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 C9orf106Q8NAJ2 232 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 OR52J3Q8NH60 311 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 SSC4DQ8WTU2 575 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 PHF10Q8WUB8 498 aaKnown RBP5.66□□□□□ -1.5
LTBR-212ENST00000543542 TMEM239Q8WW34 195 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 ASB5Q8WWX0 329 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 HIST1H2ACQ93077 130 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 KTI12Q96EK9 354 aaPredicted RBP5.66□□□□□ -1.5
LTBR-212ENST00000543542 LRRC46Q96FV0 321 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 MPP4Q96JB8 637 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 ADGRG7Q96K78 797 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 ARL5BQ96KC2 179 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 HS6ST2Q96MM7 605 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 ZFP3Q96NJ6 502 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 RAB3IPQ96QF0 476 aaPredicted RBP5.66□□□□□ -1.5
LTBR-212ENST00000543542 ZNF347Q96SE7 839 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 ASPNQ9BXN1 380 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 SRXN1Q9BYN0 137 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 POTEKPQ9BYX7 375 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 KLHL4Q9C0H6 718 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 COQ10BQ9H8M1 238 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 KRCC1Q9NPI7 259 aaPredicted RBP5.66□□□□□ -1.5
LTBR-212ENST00000543542 KLHL13Q9P2N7 655 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 CLCF1Q9UBD9 225 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 SLC7A8Q9UHI5 535 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 TMCC3Q9ULS5 477 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 CLEC4AQ9UMR7 237 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 POMPQ9Y244 141 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 RNF6Q9Y252 685 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 TRAPPC4Q9Y296 219 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 EMC9Q9Y3B6 208 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 MED31Q9Y3C7 131 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 ZNF175Q9Y473 711 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 TESMINQ9Y4I5 508 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 ENPP4Q9Y6X5 453 aa5.66□□□□□ -1.5
LTBR-212ENST00000543542 PHF3Q92576 2039 aaKnown RBP5.65□□□□□ -1.5
LTBR-212ENST00000543542 DNAJC13O75165 2243 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 A0A0G2JNJ9 132 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 DHRS12A0PJE2 317 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 MBD3L4A6NDZ8 208 aaPredicted RBP5.65□□□□□ -1.5
LTBR-212ENST00000543542 MBD3L3A6NE82 208 aaPredicted RBP5.65□□□□□ -1.5
LTBR-212ENST00000543542 MBD3L5A6NJ08 208 aaPredicted RBP5.65□□□□□ -1.5
LTBR-212ENST00000543542 LIPT2A6NK58 231 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 AQP12BA6NM10 295 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 TMEM229AB2RXF0 380 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 EEF1E1-BLOC1S5C9J1V9 151 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 ACOT8O14734 319 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 EEF1E1O43324 174 aaKnown RBP5.65□□□□□ -1.5
LTBR-212ENST00000543542 DNPH1O43598 174 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 SMNDC1O75940 238 aaKnown RBP eCLIP5.65□□□□□ -1.5
LTBR-212ENST00000543542 AQP8O94778 261 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 AKR7A3O95154 331 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 RCBTB2O95199 551 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 GADD45GO95257 159 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 CH25HO95992 272 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 MT-ND1P03886 318 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 H1F0P07305 194 aaKnown RBP5.65□□□□□ -1.5
LTBR-212ENST00000543542 RAP2AP10114 183 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 SAGP10523 405 aaPredicted RBP5.65□□□□□ -1.5
LTBR-212ENST00000543542 IMPDH2P12268 514 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 IFI30P13284 250 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 RHCEP18577 417 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 AHCYP23526 432 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 CTSSP25774 331 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 CHRNB4P30926 498 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 RRM2P31350 389 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 OPRM1P35372 400 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 TIMP3P35625 211 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 RBM34P42696 430 aaKnown RBP5.65□□□□□ -1.5
LTBR-212ENST00000543542 ADORA2A-AS1P86434 159 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 VLDLRP98155 873 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 PMS2P3Q13401 168 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 C1DQ13901 141 aaKnown RBP5.65□□□□□ -1.5
LTBR-212ENST00000543542 MFSD13AQ14CX5 517 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 ZSCAN26Q16670 478 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 FAM69AQ5T7M9 428 aa5.65□□□□□ -1.5
LTBR-212ENST00000543542 EEF1A1P5Q5VTE0 462 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms