RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 HLXQ14774 488 aaPredicted RBP4.09□□□□□ -1.75
LIMS1-214ENST00000542845 PFKFB4Q16877 469 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 ALKBH6Q3KRA9 238 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 GLE1Q53GS7 698 aaKnown RBP4.09□□□□□ -1.75
LIMS1-214ENST00000542845 DEFB121Q5J5C9 76 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 CDKL4Q5MAI5 379 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 OTUD3Q5T2D3 398 aaPredicted RBP4.09□□□□□ -1.75
LIMS1-214ENST00000542845 RNASEH2BQ5TBB1 312 aaKnown RBP4.09□□□□□ -1.75
LIMS1-214ENST00000542845 MBNL2Q5VZF2 373 aaKnown RBP4.09□□□□□ -1.75
LIMS1-214ENST00000542845 RUSC1-AS1Q66K80 236 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 KRT80Q6KB66 452 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 GTF2H2CQ6P1K8 395 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 DRICH1Q6PGQ1 229 aaPredicted RBP4.09□□□□□ -1.75
LIMS1-214ENST00000542845 RAD9BQ6WBX8 426 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 RAPH1Q70E73 1250 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 SZRD1Q7Z422 152 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 GALNT7Q86SF2 657 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 WDFY1Q8IWB7 410 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 Q8N1Y9 231 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 METTL4Q8N3J2 472 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 C1orf52Q8N6N3 182 aaKnown RBP4.09□□□□□ -1.75
LIMS1-214ENST00000542845 NAT8LQ8N9F0 302 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 SYT14Q8NB59 555 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 OR4F5Q8NH21 305 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 FBXO30Q8TB52 745 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 STAG3L4Q8TBR4 150 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 ACTRT2Q8TDY3 377 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 TRPC4APQ8TEL6 797 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 MAIP1Q8WWC4 291 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 CHMP6Q96FZ7 201 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 ANKRD27Q96NW4 1050 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 SYT3Q9BQG1 590 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 GATA5Q9BWX5 397 aaPredicted RBP4.09□□□□□ -1.75
LIMS1-214ENST00000542845 SEC61A2Q9H9S3 476 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 C3orf14Q9HBI5 128 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 SLC7A10Q9NS82 523 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 FARSBQ9NSD9 589 aaKnown RBP4.09□□□□□ -1.75
LIMS1-214ENST00000542845 DDX18Q9NVP1 670 aaKnown RBP4.09□□□□□ -1.75
LIMS1-214ENST00000542845 NUDT4Q9NZJ9 180 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 OPN4Q9UHM6 478 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 ADAM29Q9UKF5 820 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 NUP50Q9UKX7 468 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 GUCA1BQ9UMX6 200 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 CARD8Q9Y2G2 431 aa4.09□□□□□ -1.75
LIMS1-214ENST00000542845 A0A1B0GUS0 222 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 MDFIC2A0A1B0GVS7 189 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 GNG14A0A1W2PPG7 69 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 CCDC189A1A4V9 331 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 CLPSL1A2RUU4 121 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 HMGB1P1B2RPK0 211 aaPredicted RBP4.08□□□□□ -1.76
LIMS1-214ENST00000542845 CCDC188H7C350 402 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 GPR171O14626 319 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 HOXA3O43365 443 aaPredicted RBP4.08□□□□□ -1.76
LIMS1-214ENST00000542845 PIP5K1CO60331 668 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 PLOD3O60568 738 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 CYP7B1O75881 506 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 SEMA3DO95025 777 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 H6PDO95479 791 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 IGFBP1P08833 259 aaPredicted RBP4.08□□□□□ -1.76
LIMS1-214ENST00000542845 CELA3BP08861 270 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 CSF1P09603 554 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 SELEP16581 610 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 STMN1P16949 149 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 FSTP19883 344 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 ELK4P28324 431 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 CXCR5P32302 372 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 RAD52P43351 418 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 FNTAP49354 379 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 DIO1P49895 249 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 CCR4P51679 360 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 CCNG1P51959 295 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 EPPK1P58107 5090 aaKnown RBP4.08□□□□□ -1.76
LIMS1-214ENST00000542845 ZNF117Q03924 483 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 HGFACQ04756 655 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 BTKQ06187 659 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 MGAT5Q09328 741 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 NPRL3Q12980 569 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 DAG1Q14118 895 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 DOC2BQ14184 412 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 SLC29A2Q14542 456 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 MAD2L1BPQ15013 274 aaPredicted RBP4.08□□□□□ -1.76
LIMS1-214ENST00000542845 TRADDQ15628 312 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 CD226Q15762 336 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 NDUFAF6Q330K2 333 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 SLC9B1Q4ZJI4 515 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 ZNF362Q5T0B9 420 aaPredicted RBP4.08□□□□□ -1.76
LIMS1-214ENST00000542845 TSPO2Q5TGU0 170 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 FAM219BQ5XKK7 198 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 FRG2Q64ET8 278 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 SAXO2Q658L1 398 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 TTC27Q6P3X3 843 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 FIP1L1Q6UN15 594 aaKnown RBP4.08□□□□□ -1.76
LIMS1-214ENST00000542845 CBLN3Q6UW01 205 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 LRIG3Q6UXM1 1119 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 GOLGA7Q7Z5G4 137 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 C17orf78Q8N4C9 275 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 MMGT1Q8N4V1 131 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 ZNF614Q8N883 585 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 ZNF527Q8NB42 609 aa4.08□□□□□ -1.76
LIMS1-214ENST00000542845 GLB1L3Q8NCI6 653 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms