RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 FAM240BA0A1B0GVZ2 78 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 FITM1A5D6W6 292 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 CENPXA8MT69 81 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 H0YIG0 161 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 SLC43A1O75387 559 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 OR7A10O76100 309 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 CSTAP01040 98 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 CLPSP04118 112 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 CSF2P04141 144 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 HIST1H1CP16403 213 aaKnown RBP6□□□□□ -1.45
PTPRO-208ENST00000542557 ALAS2P22557 587 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 INPP1P49441 399 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 CSTF1Q05048 431 aaKnown RBP6□□□□□ -1.45
PTPRO-208ENST00000542557 SLC3A1Q07837 685 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 CCDC58Q4VC31 144 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 Q6ZS52 159 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 SYT13Q7L8C5 426 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 SSX6Q7RTT6 188 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 SLITRK4Q8IW52 837 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 TCTE3Q8IZS6 198 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 ARL14Q8N4G2 192 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 FRMD1Q8N878 549 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 FAM98AQ8NCA5 519 aaKnown RBP6□□□□□ -1.45
PTPRO-208ENST00000542557 OR5J2Q8NH18 312 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 RPS4Y2Q8TD47 263 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 LIPHQ8WWY8 451 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 PHYHIPQ92561 330 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 TRIM63Q969Q1 353 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 C3orf49Q96BT1 292 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 ARSGQ96EG1 525 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 DDOQ99489 341 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 MAP3K3Q99759 626 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 GDF15Q99988 308 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 MARVELD1Q9BSK0 173 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 NMNAT2Q9BZQ4 307 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 ZCCHC4Q9H5U6 513 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 NRIP3Q9NQ35 241 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 EXOSC3Q9NQT5 275 aaKnown RBP6□□□□□ -1.45
PTPRO-208ENST00000542557 DDX28Q9NUL7 540 aaKnown RBP6□□□□□ -1.45
PTPRO-208ENST00000542557 ERVK-19Q9WJR5 959 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 RASD1Q9Y272 281 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 OR10H1Q9Y4A9 318 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 CHURC1-FNTBB4DL54 471 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 MCIDASD6RGH6 385 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 ORC5O43913 435 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 TMEM127O75204 238 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 GATBO75879 557 aaKnown RBP6□□□□□ -1.45
PTPRO-208ENST00000542557 ARL6IP5O75915 188 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 GYPBP06028 91 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 PNMTP11086 282 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 APEHP13798 732 aaKnown RBP6□□□□□ -1.45
PTPRO-208ENST00000542557 NME1P15531 152 aaKnown RBP6□□□□□ -1.45
PTPRO-208ENST00000542557 PYCR1P32322 319 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 DIO1P49895 249 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 GBX2P52951 348 aaPredicted RBP6□□□□□ -1.45
PTPRO-208ENST00000542557 PRPS1P60891 318 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 MAT1AQ00266 395 aaKnown RBP6□□□□□ -1.45
PTPRO-208ENST00000542557 SF3B4Q15427 424 aaKnown RBP eCLIP6□□□□□ -1.45
PTPRO-208ENST00000542557 TATDN3Q17R31 274 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 ACSM3Q53FZ2 586 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 KLHL26Q53HC5 615 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 TM4SF20Q53R12 229 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 FNDC7Q5VTL7 733 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 PYHIN1Q6K0P9 492 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 RPL22L1Q6P5R6 122 aaKnown RBP6□□□□□ -1.45
PTPRO-208ENST00000542557 C17orf82Q86X59 251 aaPredicted RBP6□□□□□ -1.45
PTPRO-208ENST00000542557 GKN2Q86XP6 184 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 SLC35F2Q8IXU6 374 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 OR4K13Q8NH42 304 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 GHSRQ92847 366 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 CREB3L1Q96BA8 519 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 PELI1Q96FA3 418 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 RNF170Q96K19 258 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 ABRACLQ9P1F3 81 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 EPHA6Q9UF33 1036 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 IER3IP1Q9Y5U9 82 aa6□□□□□ -1.45
PTPRO-208ENST00000542557 MYO9BQ13459 2157 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 IGKV1D-42A0A075B6H8 117 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 A0A0G2JMP0 313 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 A0A0X1KG70 313 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 A0A1B0GTQ1 180 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 SYNDIG1LA6NDD5 238 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 TLCD2A6NGC4 264 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 NOTOA8MTQ0 251 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 GPRIN2O60269 458 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 ZNF217O75362 1048 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 CDC123O75794 336 aaPredicted RBP5.99□□□□□ -1.45
PTPRO-208ENST00000542557 DKK1O94907 266 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 EIF4EP06730 217 aaKnown RBP5.99□□□□□ -1.45
PTPRO-208ENST00000542557 YES1P07947 543 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 UCHL1P09936 223 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 PSKH1P11801 424 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 RAB3BP20337 219 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 PITPNBP48739 271 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 FNTBP49356 437 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 GDI2P50395 445 aaKnown RBP5.99□□□□□ -1.45
PTPRO-208ENST00000542557 BTG2P78543 158 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 CDK10Q15131 360 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 PON3Q15166 354 aa5.99□□□□□ -1.45
PTPRO-208ENST00000542557 FAM27D1Q5T7N8 215 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms