RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 AHCYP23526 432 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 ADORA2BP29275 332 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 ADSSP30520 456 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 AKT2P31751 481 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 PRDX2P32119 198 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 BMI1P35226 326 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 RPL4P36578 427 aaKnown RBP3.83□□□□□ -1.8
YBX3-210ENST00000540975 TAGLN2P37802 199 aaKnown RBP3.83□□□□□ -1.8
YBX3-210ENST00000540975 HSPA13P48723 471 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 CAV2P51636 162 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 VLDLRP98155 873 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 CASP8Q14790 479 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 SPCS2Q15005 226 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 LRRC36Q1X8D7 754 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 TOR1AIP1Q5JTV8 583 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 SULT1C3Q6IMI6 304 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 ERICH5Q6P6B1 374 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 ZCCHC12Q6PEW1 402 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 TMEM26Q6ZUK4 368 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 CCDC121Q6ZUS5 278 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 USP50Q70EL3 339 aaPredicted RBP3.83□□□□□ -1.8
YBX3-210ENST00000540975 IFNEQ86WN2 208 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 PSTKQ8IV42 348 aaKnown RBP3.83□□□□□ -1.8
YBX3-210ENST00000540975 LRRC34Q8IZ02 419 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 OR2A12Q8NGT7 310 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 OR9A4Q8NGU2 314 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 STARD8Q92502 1023 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 ELMO2Q96JJ3 720 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 IFT74Q96LB3 600 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 DPH5Q9H2P9 285 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 OR51J1Q9H342 316 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 GLIPR2Q9H4G4 154 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 LRRC19Q9H756 370 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 SPACA1Q9HBV2 294 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 OR1A1Q9P1Q5 309 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 P2RX2Q9UBL9 471 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 CD300AQ9UGN4 299 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 SNX6Q9UNH7 406 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 AURKCQ9UQB9 309 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 PIN4Q9Y237 131 aaKnown RBP3.83□□□□□ -1.8
YBX3-210ENST00000540975 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.83□□□□□ -1.8
YBX3-210ENST00000540975 COMMD3-BMI1R4GMX3 469 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 ELP1O95163 1332 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 CCDC171Q6TFL3 1326 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 RTL1A6NKG5 1358 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 NUP153P49790 1475 aaKnown RBP3.83□□□□□ -1.8
YBX3-210ENST00000540975 GPATCH8Q9UKJ3 1502 aaKnown RBP3.83□□□□□ -1.8
YBX3-210ENST00000540975 LTBP1Q14766 1721 aa3.83□□□□□ -1.8
YBX3-210ENST00000540975 NACAE9PAV3 2078 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 KIAA0556O60303 1618 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 RAPGEF6Q8TEU7 1601 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 ADCY10Q96PN6 1610 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 ARHGEF5Q12774 1597 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 ERCC6Q03468 1493 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 NUP155O75694 1391 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 RPAP1Q9BWH6 1393 aaPredicted RBP3.82□□□□□ -1.8
YBX3-210ENST00000540975 TTC21AQ8NDW8 1320 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 GOLGA8IPA6NC78 632 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 TRIM3O75382 744 aaPredicted RBP3.82□□□□□ -1.8
YBX3-210ENST00000540975 CRTAPO75718 401 aaPredicted RBP3.82□□□□□ -1.8
YBX3-210ENST00000540975 CTRB1P17538 263 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 CCNE1P24864 410 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 RPL29P47914 159 aaKnown RBP3.82□□□□□ -1.8
YBX3-210ENST00000540975 GDI2P50395 445 aaKnown RBP3.82□□□□□ -1.8
YBX3-210ENST00000540975 GBX2P52951 348 aaPredicted RBP3.82□□□□□ -1.8
YBX3-210ENST00000540975 EGFEM1PQ0D2K5 195 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 FUT7Q11130 342 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 TFDP1Q14186 410 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 DMC1Q14565 340 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 CTRB2Q6GPI1 263 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 MIER3Q7Z3K6 550 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 AKAP14Q86UN6 197 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 STX12Q86Y82 276 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 OR9A1PQ8NGU1 263 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 ENKURQ8TC29 256 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 DYDC1Q8WWB3 177 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 MAIP1Q8WWC4 291 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 LRRC39Q96DD0 335 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 CIB1Q99828 191 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 DRC3Q9H069 523 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 RHBGQ9H310 441 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 NANOGQ9H9S0 305 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 SYTL2Q9HCH5 934 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 BATF3Q9NR55 127 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 AGPAT3Q9NRZ7 376 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 MARCH5Q9NX47 278 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 PAQR5Q9NXK6 330 aaPredicted RBP3.82□□□□□ -1.8
YBX3-210ENST00000540975 GALPQ9UBC7 116 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 IL20RAQ9UHF4 553 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 VANGL2Q9ULK5 521 aa3.82□□□□□ -1.8
YBX3-210ENST00000540975 EIF3LQ9Y262 564 aaKnown RBP3.82□□□□□ -1.8
YBX3-210ENST00000540975 CEP170Q5SW79 1584 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 C9orf84Q5VXU9 1444 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 SH3TC1Q8TE82 1336 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 XKRY2A2RUG3 117 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 ZNF879B4DU55 563 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 H0YCG3 227 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 H3BQF6 201 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 H3BQV1 296 aa3.81□□□□□ -1.8
YBX3-210ENST00000540975 CASC3O15234 703 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms