RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 TMEM19Q96HH6 336 aa12.72□□□□□ -0.37
MSRB3-209ENST00000540804 ZNF385AQ96PM9 386 aaKnown RBP12.72□□□□□ -0.37
MSRB3-209ENST00000540804 USB1Q9BQ65 265 aaKnown RBP12.72□□□□□ -0.37
MSRB3-209ENST00000540804 RSPO3Q9BXY4 272 aaPredicted RBP12.72□□□□□ -0.37
MSRB3-209ENST00000540804 TPT1P8Q9HAU6 139 aa12.72□□□□□ -0.37
MSRB3-209ENST00000540804 TMBIM4Q9HC24 238 aa12.72□□□□□ -0.37
MSRB3-209ENST00000540804 P2RX2Q9UBL9 471 aa12.72□□□□□ -0.37
MSRB3-209ENST00000540804 MALT1Q9UDY8 824 aa12.72□□□□□ -0.37
MSRB3-209ENST00000540804 TRAPPC4Q9Y296 219 aa12.72□□□□□ -0.37
MSRB3-209ENST00000540804 ZNF443Q9Y2A4 671 aaPredicted RBP12.72□□□□□ -0.37
MSRB3-209ENST00000540804 B3GALT5Q9Y2C3 310 aa12.72□□□□□ -0.37
MSRB3-209ENST00000540804 NAV3Q8IVL0 2385 aa12.71□□□□□ -0.37
MSRB3-209ENST00000540804 DSPPQ9NZW4 1301 aa12.71□□□□□ -0.37
MSRB3-209ENST00000540804 CDHR4A6H8M9 788 aa12.71□□□□□ -0.37
MSRB3-209ENST00000540804 PDLIM1O00151 329 aa12.71□□□□□ -0.37
MSRB3-209ENST00000540804 GPR171O14626 319 aa12.71□□□□□ -0.37
MSRB3-209ENST00000540804 ZNF208O43345 1280 aa12.71□□□□□ -0.37
MSRB3-209ENST00000540804 DNPH1O43598 174 aa12.71□□□□□ -0.37
MSRB3-209ENST00000540804 TMCC2O75069 709 aa12.71□□□□□ -0.37
MSRB3-209ENST00000540804 ANP32DO95626 131 aa12.71□□□□□ -0.37
MSRB3-209ENST00000540804 IL6P05231 212 aa12.71□□□□□ -0.37
MSRB3-209ENST00000540804 THBS1P07996 1170 aa12.71□□□□□ -0.37
MSRB3-209ENST00000540804 IDO1P14902 403 aa12.71□□□□□ -0.37
MSRB3-209ENST00000540804 CDH2P19022 906 aaPredicted RBP12.71□□□□□ -0.37
MSRB3-209ENST00000540804 ANXA11P50995 505 aaKnown RBP12.71□□□□□ -0.37
MSRB3-209ENST00000540804 DSTNP60981 165 aa12.71□□□□□ -0.37
MSRB3-209ENST00000540804 GNA13Q14344 377 aa12.71□□□□□ -0.37
MSRB3-209ENST00000540804 OTUD3Q5T2D3 398 aaPredicted RBP12.71□□□□□ -0.37
MSRB3-209ENST00000540804 SLC22A25Q6T423 547 aa12.71□□□□□ -0.37
MSRB3-209ENST00000540804 CROCCP2Q86T23 111 aa12.71□□□□□ -0.37
MSRB3-209ENST00000540804 MUS81Q96NY9 551 aa12.71□□□□□ -0.37
MSRB3-209ENST00000540804 MDFIQ99750 246 aa12.71□□□□□ -0.37
MSRB3-209ENST00000540804 NAA11Q9BSU3 229 aaPredicted RBP12.71□□□□□ -0.37
MSRB3-209ENST00000540804 REG4Q9BYZ8 158 aa12.71□□□□□ -0.37
MSRB3-209ENST00000540804 SDR39U1Q9NRG7 319 aaPredicted RBP12.71□□□□□ -0.37
MSRB3-209ENST00000540804 NKIRAS1Q9NYS0 192 aa12.71□□□□□ -0.37
MSRB3-209ENST00000540804 TAS2R16Q9NYV7 291 aa12.71□□□□□ -0.37
MSRB3-209ENST00000540804 ZANQ9Y493 2812 aa12.71□□□□□ -0.37
MSRB3-209ENST00000540804 NSD1Q96L73 2696 aaPredicted RBP12.71□□□□□ -0.38
MSRB3-209ENST00000540804 ROS1P08922 2347 aa12.71□□□□□ -0.38
MSRB3-209ENST00000540804 LIPT2A6NK58 231 aa12.7□□□□□ -0.38
MSRB3-209ENST00000540804 SLCO1B7G3V0H7 640 aa12.7□□□□□ -0.38
MSRB3-209ENST00000540804 FAAHO00519 579 aa12.7□□□□□ -0.38
MSRB3-209ENST00000540804 UBDO15205 165 aa12.7□□□□□ -0.38
MSRB3-209ENST00000540804 SSX4O60224 188 aa12.7□□□□□ -0.38
MSRB3-209ENST00000540804 CXCR1P25024 350 aa12.7□□□□□ -0.38
MSRB3-209ENST00000540804 CD40P25942 277 aa12.7□□□□□ -0.38
MSRB3-209ENST00000540804 IDUAP35475 653 aa12.7□□□□□ -0.38
MSRB3-209ENST00000540804 POLR2JP52435 117 aaKnown RBP12.7□□□□□ -0.38
MSRB3-209ENST00000540804 IRX1P78414 480 aaPredicted RBP12.7□□□□□ -0.38
MSRB3-209ENST00000540804 PPP2R2BQ00005 443 aa12.7□□□□□ -0.38
MSRB3-209ENST00000540804 GSTA3Q16772 222 aa12.7□□□□□ -0.38
MSRB3-209ENST00000540804 LIN52Q52LA3 116 aa12.7□□□□□ -0.38
MSRB3-209ENST00000540804 C6orf10Q5SRN2 563 aa12.7□□□□□ -0.38
MSRB3-209ENST00000540804 SERPINA11Q86U17 422 aa12.7□□□□□ -0.38
MSRB3-209ENST00000540804 DTX2Q86UW9 622 aa12.7□□□□□ -0.38
MSRB3-209ENST00000540804 P2RY8Q86VZ1 359 aa12.7□□□□□ -0.38
MSRB3-209ENST00000540804 C10orf111Q8N326 155 aa12.7□□□□□ -0.38
MSRB3-209ENST00000540804 OR9K2Q8NGE7 335 aa12.7□□□□□ -0.38
MSRB3-209ENST00000540804 PMM1Q92871 262 aa12.7□□□□□ -0.38
MSRB3-209ENST00000540804 MAL2Q969L2 176 aa12.7□□□□□ -0.38
MSRB3-209ENST00000540804 ITCHQ96J02 903 aa12.7□□□□□ -0.38
MSRB3-209ENST00000540804 CACNG6Q9BXT2 260 aa12.7□□□□□ -0.38
MSRB3-209ENST00000540804 PAIP1Q9H074 479 aaKnown RBP12.7□□□□□ -0.38
MSRB3-209ENST00000540804 ALG2Q9H553 416 aa12.7□□□□□ -0.38
MSRB3-209ENST00000540804 ADPRHL2Q9NX46 363 aa12.7□□□□□ -0.38
MSRB3-209ENST00000540804 ZIM2Q9NZV7 527 aa12.7□□□□□ -0.38
MSRB3-209ENST00000540804 UPB1Q9UBR1 384 aa12.7□□□□□ -0.38
MSRB3-209ENST00000540804 USF3Q68DE3 2245 aa12.7□□□□□ -0.38
MSRB3-209ENST00000540804 CUBNO60494 3623 aa12.69□□□□□ -0.38
MSRB3-209ENST00000540804 KLF11O14901 512 aa12.69□□□□□ -0.38
MSRB3-209ENST00000540804 EIF1BO60739 113 aaKnown RBP12.69□□□□□ -0.38
MSRB3-209ENST00000540804 ZCCHC18P0CG32 403 aa12.69□□□□□ -0.38
MSRB3-209ENST00000540804 FKBP2P26885 142 aaKnown RBP12.69□□□□□ -0.38
MSRB3-209ENST00000540804 P2RY4P51582 365 aa12.69□□□□□ -0.38
MSRB3-209ENST00000540804 CRISP3P54108 245 aa12.69□□□□□ -0.38
MSRB3-209ENST00000540804 TXNL4AP83876 142 aaKnown RBP12.69□□□□□ -0.38
MSRB3-209ENST00000540804 LRRC74AQ0VAA2 488 aa12.69□□□□□ -0.38
MSRB3-209ENST00000540804 HIKESHIQ53FT3 197 aa12.69□□□□□ -0.38
MSRB3-209ENST00000540804 BEND6Q5SZJ8 279 aaPredicted RBP12.69□□□□□ -0.38
MSRB3-209ENST00000540804 C11orf71Q6IPW1 123 aa12.69□□□□□ -0.38
MSRB3-209ENST00000540804 PAQR6Q6TCH4 344 aa12.69□□□□□ -0.38
MSRB3-209ENST00000540804 TMEM108Q6UXF1 575 aa12.69□□□□□ -0.38
MSRB3-209ENST00000540804 DNM1P46Q6ZS02 220 aa12.69□□□□□ -0.38
MSRB3-209ENST00000540804 GPAT4Q86UL3 456 aa12.69□□□□□ -0.38
MSRB3-209ENST00000540804 MIER2Q8N344 545 aa12.69□□□□□ -0.38
MSRB3-209ENST00000540804 KDM8Q8N371 416 aa12.69□□□□□ -0.38
MSRB3-209ENST00000540804 GTF2H4Q92759 462 aa12.69□□□□□ -0.38
MSRB3-209ENST00000540804 HS6ST2Q96MM7 605 aa12.69□□□□□ -0.38
MSRB3-209ENST00000540804 SLC17A5Q9NRA2 495 aa12.69□□□□□ -0.38
MSRB3-209ENST00000540804 SLAMF8Q9P0V8 285 aa12.69□□□□□ -0.38
MSRB3-209ENST00000540804 POU2F3Q9UKI9 436 aa12.69□□□□□ -0.38
MSRB3-209ENST00000540804 SLC9A8Q9Y2E8 581 aa12.69□□□□□ -0.38
MSRB3-209ENST00000540804 PCDHB14Q9Y5E9 798 aa12.69□□□□□ -0.38
MSRB3-209ENST00000540804 USH1CQ9Y6N9 552 aa12.69□□□□□ -0.38
MSRB3-209ENST00000540804 ARID1AO14497 2285 aa12.69□□□□□ -0.38
MSRB3-209ENST00000540804 IGHV4-30-2A0A087WSY4 118 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 AQP7P3A6NL99 342 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 GPRIN2O60269 458 aa12.68□□□□□ -0.38
MSRB3-209ENST00000540804 GPIP06744 558 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms