RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 OR2M5A3KFT3 312 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 ZNF860A6NHJ4 632 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 PRR32B1ATL7 298 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 PYCARD-AS1I3L0S3 204 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 OGG1O15527 345 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 PTP4A3O75365 173 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 STX11O75558 287 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 ARL6IP5O75915 188 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 KRT33AO76009 404 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 IGF2P01344 180 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 ZNF888P0CJ79 500 aaPredicted RBP12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 VSIG10L2P0DP72 767 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 DPP4P27487 766 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 HSD17B2P37059 387 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 GRM7Q14831 915 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 HYAL4Q2M3T9 481 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 LRFN4Q6PJG9 635 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 C17orf107Q6ZR85 190 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 HDDC3Q8N4P3 179 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 SYNPRQ8TBG9 265 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 OR8D1Q8WZ84 308 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 GINS4Q9BRT9 223 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 ARL6Q9H0F7 186 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 TRPV4Q9HBA0 871 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 IFITM5A6NNB3 132 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 CTDSPLO15194 276 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 PRKACAP17612 351 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 P2RX1P51575 399 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 NANOS3P60323 173 aaKnown RBP12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 DUSP8Q13202 625 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 FHL1Q13642 323 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 ARHGAP11BQ3KRB8 267 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 DCAF12L2Q5VW00 463 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 RELL2Q8NC24 303 aaPredicted RBP12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 OR4D10Q8NGI6 311 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 C1orf216Q8TAB5 229 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 SGTBQ96EQ0 304 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 MCCC2Q9HCC0 563 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 KLHL9Q9P2J3 617 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 MED31Q9Y3C7 131 aa12.81□□□□□ -0.36
SCNN1A-215ENST00000540037 A0A1B0GVT2 93 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 RNGTTO60942 597 aaKnown RBP12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 LDB3O75112 727 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 ADH5P11766 374 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 LAG3P18627 525 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 CDK2P24941 298 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 ARFIP1P53367 373 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 MAZP56270 477 aaKnown RBP12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 CEBPEQ15744 281 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 HNRNPA1L2Q32P51 320 aaKnown RBP12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 AMZ1Q400G9 498 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 FAM69AQ5T7M9 428 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 OR7E24Q6IFN5 339 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 NRROSQ86YC3 692 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 LRRC25Q8N386 305 aaPredicted RBP12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 FAM71CQ8NEG0 241 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 FCAMRQ8WWV6 532 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 ST8SIA2Q92186 375 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 LCORQ96JN0 433 aaPredicted RBP12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 NKX3-1Q99801 234 aaPredicted RBP12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 PITHD1Q9GZP4 211 aaPredicted RBP12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 TTYH1Q9H313 450 aaPredicted RBP12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 FLRT3Q9NZU0 649 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 DUXAA6NLW8 204 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 A8MXK9 166 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 GABARAPH6UMI1 98 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 PDCD5O14737 125 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 CREBL2O60519 120 aaPredicted RBP12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 IFNGR1P15260 489 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 VIPR2P41587 438 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 PPP2CBP62714 309 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 PPP2CAP67775 309 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 BAMBIQ13145 260 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 DEFB134Q4QY38 66 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 TMEM69Q5SWH9 247 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 TFAP2EQ6VUC0 442 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 TMPRSS11FQ6ZWK6 438 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 TMUB2Q71RG4 321 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 CDK20Q8IZL9 346 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 STK35Q8TDR2 534 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 RGP1Q92546 391 aaPredicted RBP12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 ZNF707Q96C28 371 aaPredicted RBP12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 RSPRY1Q96DX4 576 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 CACYBPQ9HB71 228 aaKnown RBP12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 OR5V1Q9UGF6 321 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 FOXJ3Q9UPW0 622 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 ATG2BQ96BY7 2078 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 GXYLT2A0PJZ3 443 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 MEIS3P1A6NDR6 274 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 PRAF2O60831 178 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 GIPP09681 153 aaPredicted RBP12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 S100A11P31949 105 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 ERVFC1P60507 584 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 SEC61A1P61619 476 aaKnown RBP12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 DHODHQ02127 395 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 EXOSC7Q15024 291 aaKnown RBP12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 DCST2Q5T1A1 773 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 ZNF626Q68DY1 528 aa12.8□□□□□ -0.36
SCNN1A-215ENST00000540037 OVCH1Q7RTY7 1134 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms