RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 INPP5KQ9BT40 448 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 CACNG6Q9BXT2 260 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 PARD6BQ9BYG5 372 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 C20orf27Q9GZN8 174 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 SLC38A1Q9H2H9 487 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 PIF1Q9H611 641 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 PNPOQ9NVS9 261 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 NKIRAS1Q9NYS0 192 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 ZNF232Q9UNY5 417 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 SLC25A15Q9Y619 301 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 ATP23Q9Y6H3 246 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 PMF1-BGLAPU3KQ54 211 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 NUP214P35658 2090 aaPredicted RBP13.47□□□□□ -0.25
UBE3B-211ENST00000539843 CSPG4Q6UVK1 2322 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 TLN2Q9Y4G6 2542 aa13.47□□□□□ -0.25
UBE3B-211ENST00000539843 A0A096LPI6 279 aa13.46□□□□□ -0.25
UBE3B-211ENST00000539843 TMEM72A0PK05 275 aa13.46□□□□□ -0.25
UBE3B-211ENST00000539843 CD5LO43866 347 aa13.46□□□□□ -0.25
UBE3B-211ENST00000539843 GSNP06396 782 aa13.46□□□□□ -0.25
UBE3B-211ENST00000539843 CHRM4P08173 479 aa13.46□□□□□ -0.25
UBE3B-211ENST00000539843 EDNRAP25101 427 aa13.46□□□□□ -0.25
UBE3B-211ENST00000539843 GTF2E2P29084 291 aaKnown RBP13.46□□□□□ -0.25
UBE3B-211ENST00000539843 CRATP43155 626 aa13.46□□□□□ -0.25
UBE3B-211ENST00000539843 PRPS1P60891 318 aa13.46□□□□□ -0.25
UBE3B-211ENST00000539843 EPS8Q12929 822 aa13.46□□□□□ -0.25
UBE3B-211ENST00000539843 WBP2NLQ6ICG8 309 aa13.46□□□□□ -0.25
UBE3B-211ENST00000539843 MAPK1IP1LQ8NDC0 245 aa13.46□□□□□ -0.25
UBE3B-211ENST00000539843 PNPT1Q8TCS8 783 aaKnown RBP13.46□□□□□ -0.25
UBE3B-211ENST00000539843 ZG16BQ96DA0 208 aa13.46□□□□□ -0.25
UBE3B-211ENST00000539843 MUS81Q96NY9 551 aa13.46□□□□□ -0.25
UBE3B-211ENST00000539843 SF3B5Q9BWJ5 86 aaKnown RBP13.46□□□□□ -0.25
UBE3B-211ENST00000539843 MOV10Q9HCE1 1003 aaKnown RBP13.46□□□□□ -0.25
UBE3B-211ENST00000539843 YAE1D1Q9NRH1 226 aa13.46□□□□□ -0.25
UBE3B-211ENST00000539843 B3GALT5Q9Y2C3 310 aa13.46□□□□□ -0.25
UBE3B-211ENST00000539843 FLVCR1Q9Y5Y0 555 aa13.46□□□□□ -0.25
UBE3B-211ENST00000539843 A0A1W2PR80 420 aa13.45□□□□□ -0.26
UBE3B-211ENST00000539843 OR6C65A6NJZ3 312 aa13.45□□□□□ -0.26
UBE3B-211ENST00000539843 KIAA1324LA8MWY0 1029 aaPredicted RBP13.45□□□□□ -0.26
UBE3B-211ENST00000539843 SDHDO14521 159 aa13.45□□□□□ -0.26
UBE3B-211ENST00000539843 AP3D1O14617 1153 aa13.45□□□□□ -0.26
UBE3B-211ENST00000539843 BCAS1O75363 584 aaPredicted RBP13.45□□□□□ -0.26
UBE3B-211ENST00000539843 SLC22A3O75751 556 aa13.45□□□□□ -0.26
UBE3B-211ENST00000539843 VAMP5O95183 116 aa13.45□□□□□ -0.26
UBE3B-211ENST00000539843 CSF3P09919 207 aa13.45□□□□□ -0.26
UBE3B-211ENST00000539843 ALDOCP09972 364 aaKnown RBP13.45□□□□□ -0.26
UBE3B-211ENST00000539843 KITP10721 976 aa13.45□□□□□ -0.26
UBE3B-211ENST00000539843 EPHA3P29320 983 aa13.45□□□□□ -0.26
UBE3B-211ENST00000539843 MPGP29372 298 aa13.45□□□□□ -0.26
UBE3B-211ENST00000539843 H3F3AP84243 136 aa13.45□□□□□ -0.26
UBE3B-211ENST00000539843 OR7A5Q15622 319 aa13.45□□□□□ -0.26
UBE3B-211ENST00000539843 GABRA6Q16445 453 aa13.45□□□□□ -0.26
UBE3B-211ENST00000539843 PDCD4Q53EL6 469 aaKnown RBP13.45□□□□□ -0.26
UBE3B-211ENST00000539843 TMEM225Q6GV28 225 aa13.45□□□□□ -0.26
UBE3B-211ENST00000539843 MSANTD1Q6ZTZ1 278 aa13.45□□□□□ -0.26
UBE3B-211ENST00000539843 AAED1Q7RTV5 226 aa13.45□□□□□ -0.26
UBE3B-211ENST00000539843 GPAT4Q86UL3 456 aa13.45□□□□□ -0.26
UBE3B-211ENST00000539843 CADM2Q8N3J6 435 aa13.45□□□□□ -0.26
UBE3B-211ENST00000539843 OR52E4Q8NGH9 312 aa13.45□□□□□ -0.26
UBE3B-211ENST00000539843 OR52P1PQ8NH57 321 aa13.45□□□□□ -0.26
UBE3B-211ENST00000539843 TMEM45BQ96B21 275 aa13.45□□□□□ -0.26
UBE3B-211ENST00000539843 ITCHQ96J02 903 aa13.45□□□□□ -0.26
UBE3B-211ENST00000539843 RAD21L1Q9H4I0 556 aa13.45□□□□□ -0.26
UBE3B-211ENST00000539843 OBP2BQ9NPH6 170 aa13.45□□□□□ -0.26
UBE3B-211ENST00000539843 GDF2Q9UK05 429 aaPredicted RBP13.45□□□□□ -0.26
UBE3B-211ENST00000539843 A8MVM7 634 aa13.44□□□□□ -0.26
UBE3B-211ENST00000539843 CD8AP01732 235 aa13.44□□□□□ -0.26
UBE3B-211ENST00000539843 BCHEP06276 602 aa13.44□□□□□ -0.26
UBE3B-211ENST00000539843 ITGA5P08648 1049 aa13.44□□□□□ -0.26
UBE3B-211ENST00000539843 SLC25A16P16260 332 aa13.44□□□□□ -0.26
UBE3B-211ENST00000539843 RPS4Y1P22090 263 aaKnown RBP13.44□□□□□ -0.26
UBE3B-211ENST00000539843 DSTNP60981 165 aa13.44□□□□□ -0.26
UBE3B-211ENST00000539843 UBE2NP61088 152 aaKnown RBP13.44□□□□□ -0.26
UBE3B-211ENST00000539843 CEACAM7Q14002 265 aa13.44□□□□□ -0.26
UBE3B-211ENST00000539843 SLC17A1Q14916 467 aa13.44□□□□□ -0.26
UBE3B-211ENST00000539843 C6orf10Q5SRN2 563 aa13.44□□□□□ -0.26
UBE3B-211ENST00000539843 RNF220Q5VTB9 566 aa13.44□□□□□ -0.26
UBE3B-211ENST00000539843 C9orf135Q5VTT2 229 aa13.44□□□□□ -0.26
UBE3B-211ENST00000539843 PODNL1Q6PEZ8 512 aa13.44□□□□□ -0.26
UBE3B-211ENST00000539843 OR9K2Q8NGE7 335 aa13.44□□□□□ -0.26
UBE3B-211ENST00000539843 MGARPQ8TDB4 240 aa13.44□□□□□ -0.26
UBE3B-211ENST00000539843 TEX37Q96LM6 180 aa13.44□□□□□ -0.26
UBE3B-211ENST00000539843 SLC17A5Q9NRA2 495 aa13.44□□□□□ -0.26
UBE3B-211ENST00000539843 TMEM45AQ9NWC5 275 aa13.44□□□□□ -0.26
UBE3B-211ENST00000539843 ZIM2Q9NZV7 527 aa13.44□□□□□ -0.26
UBE3B-211ENST00000539843 IFT52Q9Y366 437 aa13.44□□□□□ -0.26
UBE3B-211ENST00000539843 GPR45Q9Y5Y3 372 aa13.44□□□□□ -0.26
UBE3B-211ENST00000539843 FKBP7Q9Y680 259 aa13.44□□□□□ -0.26
UBE3B-211ENST00000539843 TMEM120BA0PK00 339 aa13.43□□□□□ -0.26
UBE3B-211ENST00000539843 PRAMEF27A3QJZ7 478 aa13.43□□□□□ -0.26
UBE3B-211ENST00000539843 CDHR4A6H8M9 788 aa13.43□□□□□ -0.26
UBE3B-211ENST00000539843 AQP7P3A6NL99 342 aa13.43□□□□□ -0.26
UBE3B-211ENST00000539843 A8MV72 311 aaPredicted RBP13.43□□□□□ -0.26
UBE3B-211ENST00000539843 E7EQL1 145 aa13.43□□□□□ -0.26
UBE3B-211ENST00000539843 ZNF587BE7ETH6 402 aa13.43□□□□□ -0.26
UBE3B-211ENST00000539843 AHSA1O95433 338 aa13.43□□□□□ -0.26
UBE3B-211ENST00000539843 IMPDH2P12268 514 aa13.43□□□□□ -0.26
UBE3B-211ENST00000539843 APOBEC3AP31941 199 aaPredicted RBP13.43□□□□□ -0.26
UBE3B-211ENST00000539843 CDKN2CP42773 168 aa13.43□□□□□ -0.26
UBE3B-211ENST00000539843 STX1BP61266 288 aa13.43□□□□□ -0.26
UBE3B-211ENST00000539843 CHRFAM7AQ494W8 412 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms